RNA–Protein interactions for RNA: ENST00000578698.1

PTPRM-209, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 3

Gene PTPRM, Length 486 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-209ENST00000578698 ASPMQ8IZT6 3477 aa1.49□□□□□ -2.17
PTPRM-209ENST00000578698 ZFHX3Q15911 3703 aa1.49□□□□□ -2.17
PTPRM-209ENST00000578698 XIRP2A4UGR9 3374 aa1.48□□□□□ -2.17
PTPRM-209ENST00000578698 MAP1BP46821 2468 aaKnown RBP1.48□□□□□ -2.17
PTPRM-209ENST00000578698 SPTAN1Q13813 2472 aaKnown RBP1.48□□□□□ -2.17
PTPRM-209ENST00000578698 UBR3Q6ZT12 1888 aa1.48□□□□□ -2.17
PTPRM-209ENST00000578698 SPTBP11277 2137 aa1.48□□□□□ -2.17
PTPRM-209ENST00000578698 WDFY4Q6ZS81 3184 aa1.48□□□□□ -2.17
PTPRM-209ENST00000578698 ANKRD17O75179 2603 aaKnown RBP1.48□□□□□ -2.17
PTPRM-209ENST00000578698 AFDNP55196 1824 aaKnown RBP1.48□□□□□ -2.17
PTPRM-209ENST00000578698 HTTP42858 3142 aa1.48□□□□□ -2.17
PTPRM-209ENST00000578698 IGKV3-7A0A075B6H7 116 aa1.48□□□□□ -2.17
PTPRM-209ENST00000578698 TRAV12-3A0A0B4J271 114 aa1.48□□□□□ -2.17
PTPRM-209ENST00000578698 TRBV10-1A0A0K0K1A3 114 aa1.48□□□□□ -2.17
PTPRM-209ENST00000578698 NUPR2A6NF83 97 aa1.48□□□□□ -2.17
PTPRM-209ENST00000578698 IGHV3-30P01768 117 aa1.48□□□□□ -2.17
PTPRM-209ENST00000578698 ARMS2P0C7Q2 107 aa1.48□□□□□ -2.17
PTPRM-209ENST00000578698 IGHV3-30-5P0DP03 117 aa1.48□□□□□ -2.17
PTPRM-209ENST00000578698 SERF2P84101 59 aa1.48□□□□□ -2.17
PTPRM-209ENST00000578698 KRTAP21-2Q3LI59 83 aa1.48□□□□□ -2.17
PTPRM-209ENST00000578698 C10orf128Q5T292 105 aa1.48□□□□□ -2.17
PTPRM-209ENST00000578698 FAM74A4Q5TZK3 123 aa1.48□□□□□ -2.17
PTPRM-209ENST00000578698 ZNF563Q8TA94 476 aa1.48□□□□□ -2.17
PTPRM-209ENST00000578698 DMAC1Q96GE9 116 aa1.48□□□□□ -2.17
PTPRM-209ENST00000578698 OBSCN-AS1Q96MR7 158 aa1.48□□□□□ -2.17
PTPRM-209ENST00000578698 LINC00846Q9NV44 126 aa1.48□□□□□ -2.17
PTPRM-209ENST00000578698 MRPL36Q9P0J6 103 aaKnown RBP1.48□□□□□ -2.17
PTPRM-209ENST00000578698 LOC285556D6RIA3 1793 aa1.48□□□□□ -2.17
PTPRM-209ENST00000578698 BPTFQ12830 3046 aa1.48□□□□□ -2.17
PTPRM-209ENST00000578698 GVINP1Q7Z2Y8 2422 aa1.48□□□□□ -2.17
PTPRM-209ENST00000578698 CREBBPQ92793 2442 aa1.48□□□□□ -2.17
PTPRM-209ENST00000578698 HELZ2Q9BYK8 2649 aaKnown RBP1.48□□□□□ -2.17
PTPRM-209ENST00000578698 C2CD3Q4AC94 2353 aa1.48□□□□□ -2.17
PTPRM-209ENST00000578698 ZGRF1Q86YA3 2104 aa1.48□□□□□ -2.17
PTPRM-209ENST00000578698 MYO9AB2RTY4 2548 aa1.47□□□□□ -2.17
PTPRM-209ENST00000578698 HIVEP2P31629 2446 aa1.47□□□□□ -2.17
PTPRM-209ENST00000578698 TEP1Q99973 2627 aaKnown RBP1.47□□□□□ -2.17
PTPRM-209ENST00000578698 SMIM27A0A1W2PRY6 76 aa1.47□□□□□ -2.17
PTPRM-209ENST00000578698 LINC01549A6NIU2 74 aa1.47□□□□□ -2.17
PTPRM-209ENST00000578698 J3QKU1 62 aa1.47□□□□□ -2.17
PTPRM-209ENST00000578698 HMGN4O00479 90 aa1.47□□□□□ -2.17
PTPRM-209ENST00000578698 INE1O15225 51 aa1.47□□□□□ -2.17
PTPRM-209ENST00000578698 LINC00322Q6ZN03 302 aaPredicted RBP1.47□□□□□ -2.17
PTPRM-209ENST00000578698 TMEM14CQ9P0S9 112 aa1.47□□□□□ -2.17
PTPRM-209ENST00000578698 SCN7AQ01118 1682 aa1.47□□□□□ -2.17
PTPRM-209ENST00000578698 TSC2P49815 1807 aa1.47□□□□□ -2.17
PTPRM-209ENST00000578698 DNAH14Q0VDD8 3507 aa1.46□□□□□ -2.17
PTPRM-209ENST00000578698 EP300Q09472 2414 aaPredicted RBP1.46□□□□□ -2.18
PTPRM-209ENST00000578698 LOC110117498A0A087WWA1 95 aa1.46□□□□□ -2.18
PTPRM-209ENST00000578698 LINC01546A6NGU7 62 aa1.46□□□□□ -2.18
PTPRM-209ENST00000578698 PRH1P02810 166 aa1.46□□□□□ -2.18
PTPRM-209ENST00000578698 GNG13Q9P2W3 67 aa1.46□□□□□ -2.18
PTPRM-209ENST00000578698 LINC01558Q9Y6Z2 57 aa1.46□□□□□ -2.18
PTPRM-209ENST00000578698 DLEC1Q9Y238 1755 aa1.46□□□□□ -2.18
PTPRM-209ENST00000578698 USP24Q9UPU5 2620 aa1.46□□□□□ -2.18
PTPRM-209ENST00000578698 PI4KAP42356 2102 aa1.45□□□□□ -2.18
PTPRM-209ENST00000578698 ABCA4P78363 2273 aa1.45□□□□□ -2.18
PTPRM-209ENST00000578698 ABCA2Q9BZC7 2435 aa1.45□□□□□ -2.18
PTPRM-209ENST00000578698 BCORQ6W2J9 1755 aa1.45□□□□□ -2.18
PTPRM-209ENST00000578698 D6R8Y8 96 aa1.45□□□□□ -2.18
PTPRM-209ENST00000578698 H3BVH4 76 aa1.45□□□□□ -2.18
PTPRM-209ENST00000578698 M0R2N4 97 aa1.45□□□□□ -2.18
PTPRM-209ENST00000578698 PDE6GP18545 87 aa1.45□□□□□ -2.18
PTPRM-209ENST00000578698 S100A3P33764 101 aa1.45□□□□□ -2.18
PTPRM-209ENST00000578698 RPL37AP61513 92 aaKnown RBP1.45□□□□□ -2.18
PTPRM-209ENST00000578698 KRTAP13-1Q8IUC0 172 aa1.45□□□□□ -2.18
PTPRM-209ENST00000578698 MUSTN1Q8IVN3 82 aa1.45□□□□□ -2.18
PTPRM-209ENST00000578698 SNURFQ9Y675 71 aa1.45□□□□□ -2.18
PTPRM-209ENST00000578698 V9GYV3 84 aa1.45□□□□□ -2.18
PTPRM-209ENST00000578698 ITPR3Q14573 2671 aa1.45□□□□□ -2.18
PTPRM-209ENST00000578698 ZNF831Q5JPB2 1677 aa1.45□□□□□ -2.18
PTPRM-209ENST00000578698 FAM208AQ9UK61 1670 aaKnown RBP1.45□□□□□ -2.18
PTPRM-209ENST00000578698 ESPL1Q14674 2120 aa1.44□□□□□ -2.18
PTPRM-209ENST00000578698 SPRR4Q96PI1 79 aa1.44□□□□□ -2.18
PTPRM-209ENST00000578698 ZFYVE26Q68DK2 2539 aa1.44□□□□□ -2.18
PTPRM-209ENST00000578698 SPTBN2O15020 2390 aa1.44□□□□□ -2.18
PTPRM-209ENST00000578698 WDR87Q6ZQQ6 2873 aa1.44□□□□□ -2.18
PTPRM-209ENST00000578698 MED12Q93074 2177 aa1.44□□□□□ -2.18
PTPRM-209ENST00000578698 MYO15AQ9UKN7 3530 aa1.44□□□□□ -2.18
PTPRM-209ENST00000578698 CEP250Q9BV73 2442 aa1.44□□□□□ -2.18
PTPRM-209ENST00000578698 DOT1LQ8TEK3 1739 aa1.43□□□□□ -2.18
PTPRM-209ENST00000578698 NRXN2Q9P2S2 1712 aa1.43□□□□□ -2.18
PTPRM-209ENST00000578698 COL4A1P02462 1669 aa1.43□□□□□ -2.18
PTPRM-209ENST00000578698 FBN3Q75N90 2809 aa1.43□□□□□ -2.18
PTPRM-209ENST00000578698 NDUFB1O75438 58 aa1.43□□□□□ -2.18
PTPRM-209ENST00000578698 SPATA8Q6RVD6 105 aa1.43□□□□□ -2.18
PTPRM-209ENST00000578698 UNQ6190/PRO20217Q6UXQ8 127 aa1.43□□□□□ -2.18
PTPRM-209ENST00000578698 TMEM263Q8WUH6 116 aaKnown RBP1.43□□□□□ -2.18
PTPRM-209ENST00000578698 WFDC6Q9BQY6 131 aa1.43□□□□□ -2.18
PTPRM-209ENST00000578698 TOGARAM1Q9Y4F4 1720 aa1.43□□□□□ -2.18
PTPRM-209ENST00000578698 PCNX1Q96RV3 2341 aa1.43□□□□□ -2.18
PTPRM-209ENST00000578698 PIEZO2Q9H5I5 2752 aa1.42□□□□□ -2.18
PTPRM-209ENST00000578698 KALRNO60229 2985 aa1.42□□□□□ -2.18
PTPRM-209ENST00000578698 ANKRD36CQ5JPF3 1778 aa1.42□□□□□ -2.18
PTPRM-209ENST00000578698 IGKV3D-7A0A0C4DH55 119 aa1.42□□□□□ -2.18
PTPRM-209ENST00000578698 IGKV3OR2-268A0A0C4DH90 116 aa1.42□□□□□ -2.18
PTPRM-209ENST00000578698 A0A1B0GUT8 65 aa1.42□□□□□ -2.18
PTPRM-209ENST00000578698 M0R135 149 aa1.42□□□□□ -2.18
PTPRM-209ENST00000578698 PPP1R17O96001 155 aa1.42□□□□□ -2.18
PTPRM-209ENST00000578698 COX6B1P14854 86 aa1.42□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms