RNA–Protein interactions for RNA: ENST00000578547.1

IFT20-207, Transcript of intraflagellar transport 20, humanhuman

TSL 1 (best)

Gene IFT20, Length 962 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-207ENST00000578547 TMEM238C9JI98 176 aa7.69□□□□□ -1.18
IFT20-207ENST00000578547 TIMM17BO60830 172 aa7.69□□□□□ -1.18
IFT20-207ENST00000578547 XGP55808 180 aa7.69□□□□□ -1.18
IFT20-207ENST00000578547 SLC25A34Q6PIV7 304 aa7.69□□□□□ -1.18
IFT20-207ENST00000578547 CIRBP-AS1Q8TBR5 109 aa7.69□□□□□ -1.18
IFT20-207ENST00000578547 LITAFQ99732 161 aa7.69□□□□□ -1.18
IFT20-207ENST00000578547 APOBP04114 4563 aaKnown RBP7.68□□□□□ -1.18
IFT20-207ENST00000578547 A0A1W2PNN7 141 aa7.68□□□□□ -1.18
IFT20-207ENST00000578547 MIEN1Q9BRT3 115 aa7.68□□□□□ -1.18
IFT20-207ENST00000578547 DLEU1O43261 78 aa7.67□□□□□ -1.18
IFT20-207ENST00000578547 CDK2AP2O75956 126 aa7.67□□□□□ -1.18
IFT20-207ENST00000578547 SERTAD4-AS1Q5TG53 156 aa7.67□□□□□ -1.18
IFT20-207ENST00000578547 C12orf57Q99622 126 aa7.67□□□□□ -1.18
IFT20-207ENST00000578547 SPANXDQ9BXN6 97 aa7.66□□□□□ -1.18
IFT20-207ENST00000578547 SPANXCQ9NY87 97 aa7.66□□□□□ -1.18
IFT20-207ENST00000578547 PLAC8Q9NZF1 115 aa7.66□□□□□ -1.18
IFT20-207ENST00000578547 M0QXV9 152 aa7.65□□□□□ -1.18
IFT20-207ENST00000578547 EIF4EBP3O60516 100 aaPredicted RBP7.65□□□□□ -1.18
IFT20-207ENST00000578547 SRSF9Q13242 221 aaKnown RBP eCLIP7.65□□□□□ -1.18
IFT20-207ENST00000578547 SOSTDC1Q6X4U4 206 aa7.65□□□□□ -1.18
IFT20-207ENST00000578547 KRTAP7-1Q8IUC3 87 aa7.65□□□□□ -1.18
IFT20-207ENST00000578547 NKAPP1Q8N9T2 125 aa7.65□□□□□ -1.18
IFT20-207ENST00000578547 Q8NDZ9 215 aa7.65□□□□□ -1.18
IFT20-207ENST00000578547 LINC00308Q8TCZ7 52 aa7.65□□□□□ -1.18
IFT20-207ENST00000578547 PRO1933Q9H354 126 aa7.65□□□□□ -1.18
IFT20-207ENST00000578547 RPL24P83731 157 aaKnown RBP7.64□□□□□ -1.19
IFT20-207ENST00000578547 PHF5AQ7RTV0 110 aaKnown RBP7.64□□□□□ -1.19
IFT20-207ENST00000578547 GAGE10A6NGK3 116 aa7.63□□□□□ -1.19
IFT20-207ENST00000578547 NCR3O14931 201 aa7.63□□□□□ -1.19
IFT20-207ENST00000578547 VPREB1P12018 145 aa7.63□□□□□ -1.19
IFT20-207ENST00000578547 C2orf91Q6ZV80 131 aa7.63□□□□□ -1.19
IFT20-207ENST00000578547 HIST1H4GQ99525 98 aa7.63□□□□□ -1.19
IFT20-207ENST00000578547 SPANXB1Q9NS25 103 aaPredicted RBP7.63□□□□□ -1.19
IFT20-207ENST00000578547 UQCR10Q9UDW1 63 aa7.63□□□□□ -1.19
IFT20-207ENST00000578547 PLA2G2DQ9UNK4 145 aa7.63□□□□□ -1.19
IFT20-207ENST00000578547 C22orf24Q9Y442 160 aa7.63□□□□□ -1.19
IFT20-207ENST00000578547 J3QL48 77 aa7.62□□□□□ -1.19
IFT20-207ENST00000578547 SMR3BP02814 79 aaPredicted RBP7.62□□□□□ -1.19
IFT20-207ENST00000578547 PRR3P79522 188 aaKnown RBP7.62□□□□□ -1.19
IFT20-207ENST00000578547 MUSTN1Q8IVN3 82 aa7.62□□□□□ -1.19
IFT20-207ENST00000578547 COPS9Q8WXC6 57 aa7.62□□□□□ -1.19
IFT20-207ENST00000578547 IGLV5-37A0A075B6J1 123 aa7.61□□□□□ -1.19
IFT20-207ENST00000578547 LOC107984156A0A0G2JMH3 177 aa7.61□□□□□ -1.19
IFT20-207ENST00000578547 IFITM1P13164 125 aa7.61□□□□□ -1.19
IFT20-207ENST00000578547 UBE2BP63146 152 aa7.61□□□□□ -1.19
IFT20-207ENST00000578547 Q6ZVH6 145 aa7.61□□□□□ -1.19
IFT20-207ENST00000578547 MRPL55Q7Z7F7 128 aaKnown RBP7.61□□□□□ -1.19
IFT20-207ENST00000578547 ARL17AQ8IVW1 177 aa7.61□□□□□ -1.19
IFT20-207ENST00000578547 LINC00518Q8N0U6 118 aa7.61□□□□□ -1.19
IFT20-207ENST00000578547 KRTAP17-1Q9BYP8 105 aa7.61□□□□□ -1.19
IFT20-207ENST00000578547 HIGD1BQ9P298 99 aa7.61□□□□□ -1.19
IFT20-207ENST00000578547 HSPG2P98160 4391 aa7.6□□□□□ -1.19
IFT20-207ENST00000578547 EPM2AB3EWF7 344 aa7.6□□□□□ -1.19
IFT20-207ENST00000578547 C7orf33Q8WU49 177 aa7.6□□□□□ -1.19
IFT20-207ENST00000578547 HERC2O95714 4834 aa7.6□□□□□ -1.19
IFT20-207ENST00000578547 RPL37AP8A6NKH3 93 aa7.59□□□□□ -1.19
IFT20-207ENST00000578547 HNRNPA3P51991 378 aaKnown RBP7.59□□□□□ -1.19
IFT20-207ENST00000578547 LBHQ53QV2 105 aaPredicted RBP7.59□□□□□ -1.19
IFT20-207ENST00000578547 C4orf48Q5BLP8 95 aa7.59□□□□□ -1.19
IFT20-207ENST00000578547 LINC00528Q8N1L1 170 aa7.59□□□□□ -1.19
IFT20-207ENST00000578547 TSTD3H0UI37 97 aa7.58□□□□□ -1.2
IFT20-207ENST00000578547 M0R378 163 aa7.58□□□□□ -1.2
IFT20-207ENST00000578547 NDUFC2O95298 119 aa7.58□□□□□ -1.2
IFT20-207ENST00000578547 LINC00167Q96N53 147 aa7.58□□□□□ -1.2
IFT20-207ENST00000578547 IGKV2-28A0A075B6P5 120 aa7.57□□□□□ -1.2
IFT20-207ENST00000578547 IGKV2D-28P01615 120 aa7.57□□□□□ -1.2
IFT20-207ENST00000578547 LCE2BO14633 110 aa7.56□□□□□ -1.2
IFT20-207ENST00000578547 SMCPP49901 116 aaPredicted RBP7.56□□□□□ -1.2
IFT20-207ENST00000578547 KRTAP11-1Q8IUC1 163 aa7.56□□□□□ -1.2
IFT20-207ENST00000578547 TRBV10-2A0A0K0K1G8 114 aa7.55□□□□□ -1.2
IFT20-207ENST00000578547 A4D1N5 150 aa7.55□□□□□ -1.2
IFT20-207ENST00000578547 HSD52Q0P140 79 aa7.55□□□□□ -1.2
IFT20-207ENST00000578547 TAL2Q16559 108 aa7.55□□□□□ -1.2
IFT20-207ENST00000578547 S100A7L2Q5SY68 101 aa7.55□□□□□ -1.2
IFT20-207ENST00000578547 OR13C6PQ8NH95 151 aa7.55□□□□□ -1.2
IFT20-207ENST00000578547 PPDPFQ9H3Y8 114 aa7.55□□□□□ -1.2
IFT20-207ENST00000578547 FAT1Q14517 4588 aa7.54□□□□□ -1.2
IFT20-207ENST00000578547 TRBV10-3A0A0K0K1G6 114 aa7.54□□□□□ -1.2
IFT20-207ENST00000578547 DDTP30046 118 aa7.54□□□□□ -1.2
IFT20-207ENST00000578547 RPL37AP61513 92 aaKnown RBP7.54□□□□□ -1.2
IFT20-207ENST00000578547 CEND1Q8N111 149 aa7.54□□□□□ -1.2
IFT20-207ENST00000578547 Q8N1X5 172 aa7.54□□□□□ -1.2
IFT20-207ENST00000578547 IGLV1-50A0A075B6I6 118 aa7.53□□□□□ -1.2
IFT20-207ENST00000578547 A6NDN8 102 aa7.53□□□□□ -1.2
IFT20-207ENST00000578547 FAM229AH3BQW9 127 aa7.53□□□□□ -1.2
IFT20-207ENST00000578547 LINC00337Q8N6G1 96 aa7.53□□□□□ -1.2
IFT20-207ENST00000578547 PSORS1C2Q9UIG4 136 aa7.53□□□□□ -1.2
IFT20-207ENST00000578547 Q5VSD8 79 aa7.52□□□□□ -1.21
IFT20-207ENST00000578547 TMEM238LA0A1B0GVL6 79 aa7.51□□□□□ -1.21
IFT20-207ENST00000578547 A6NJY4 79 aa7.51□□□□□ -1.21
IFT20-207ENST00000578547 FXYD2P54710 66 aa7.51□□□□□ -1.21
IFT20-207ENST00000578547 CTAG1AP78358 180 aa7.51□□□□□ -1.21
IFT20-207ENST00000578547 C1orf137Q5JT78 98 aa7.51□□□□□ -1.21
IFT20-207ENST00000578547 TRAV13-2A0A0B4J235 113 aa7.5□□□□□ -1.21
IFT20-207ENST00000578547 IGLV6-57P01721 117 aa7.5□□□□□ -1.21
IFT20-207ENST00000578547 REG3GQ6UW15 175 aa7.5□□□□□ -1.21
IFT20-207ENST00000578547 KRTAP4-5Q9BYR2 181 aa7.5□□□□□ -1.21
IFT20-207ENST00000578547 TMEM126AQ9H061 195 aa7.5□□□□□ -1.21
IFT20-207ENST00000578547 TRAV23DV6A0A075B6W5 121 aa7.49□□□□□ -1.21
IFT20-207ENST00000578547 PRYO14603 147 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms