RNA–Protein interactions for RNA: ENST00000578044.5

SMARCE1-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,184 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-213ENST00000578044 PRR4Q16378 134 aa8.5□□□□□ -1.05
SMARCE1-213ENST00000578044 TMEM126AQ9H061 195 aa8.5□□□□□ -1.05
SMARCE1-213ENST00000578044 IGKV2-28A0A075B6P5 120 aa8.48□□□□□ -1.05
SMARCE1-213ENST00000578044 IGKV2D-28P01615 120 aa8.48□□□□□ -1.05
SMARCE1-213ENST00000578044 APOC3P02656 99 aa8.48□□□□□ -1.05
SMARCE1-213ENST00000578044 KRTAP13-2Q52LG2 175 aa8.48□□□□□ -1.05
SMARCE1-213ENST00000578044 TMEM170BQ5T4T1 132 aa8.48□□□□□ -1.05
SMARCE1-213ENST00000578044 YPEL4Q96NS1 127 aa8.48□□□□□ -1.05
SMARCE1-213ENST00000578044 CHTOPQ9Y3Y2 248 aaKnown RBP8.48□□□□□ -1.05
SMARCE1-213ENST00000578044 LINC00587B1AMM8 73 aa8.47□□□□□ -1.05
SMARCE1-213ENST00000578044 M0R378 163 aa8.47□□□□□ -1.05
SMARCE1-213ENST00000578044 TMEM223A0PJW6 202 aa8.46□□□□□ -1.06
SMARCE1-213ENST00000578044 HERV-K104P63124 156 aa8.46□□□□□ -1.06
SMARCE1-213ENST00000578044 PLEKHB2Q96CS7 222 aa8.46□□□□□ -1.06
SMARCE1-213ENST00000578044 IGKV2D-26A0A0A0MRZ7 120 aa8.45□□□□□ -1.06
SMARCE1-213ENST00000578044 PMCHL1Q16048 86 aa8.45□□□□□ -1.06
SMARCE1-213ENST00000578044 LINC00304Q8N9R0 145 aa8.45□□□□□ -1.06
SMARCE1-213ENST00000578044 IFI27L1Q96BM0 104 aa8.45□□□□□ -1.06
SMARCE1-213ENST00000578044 FAM19A1Q7Z5A9 133 aa8.44□□□□□ -1.06
SMARCE1-213ENST00000578044 A0A0U1RQV1 116 aa8.43□□□□□ -1.06
SMARCE1-213ENST00000578044 SCO1O75880 301 aa8.43□□□□□ -1.06
SMARCE1-213ENST00000578044 TSPAN13O95857 204 aa8.43□□□□□ -1.06
SMARCE1-213ENST00000578044 Q8NDZ9 215 aa8.43□□□□□ -1.06
SMARCE1-213ENST00000578044 LOC107984156A0A0G2JMH3 177 aa8.42□□□□□ -1.06
SMARCE1-213ENST00000578044 TMEM238C9JI98 176 aa8.42□□□□□ -1.06
SMARCE1-213ENST00000578044 SPRR1AP35321 89 aa8.42□□□□□ -1.06
SMARCE1-213ENST00000578044 LINC00158P58513 81 aa8.42□□□□□ -1.06
SMARCE1-213ENST00000578044 PRLHP81277 87 aa8.42□□□□□ -1.06
SMARCE1-213ENST00000578044 SPAG11AQ6PDA7 123 aa8.42□□□□□ -1.06
SMARCE1-213ENST00000578044 ARL17AQ8IVW1 177 aa8.42□□□□□ -1.06
SMARCE1-213ENST00000578044 LINC00337Q8N6G1 96 aa8.42□□□□□ -1.06
SMARCE1-213ENST00000578044 TPRXLQ17RH7 258 aa8.41□□□□□ -1.06
SMARCE1-213ENST00000578044 CBLN2Q8IUK8 224 aa8.41□□□□□ -1.06
SMARCE1-213ENST00000578044 ANAPC11Q9NYG5 84 aa8.41□□□□□ -1.06
SMARCE1-213ENST00000578044 ZNF706Q9Y5V0 76 aaPredicted RBP8.41□□□□□ -1.06
SMARCE1-213ENST00000578044 PRYO14603 147 aa8.4□□□□□ -1.06
SMARCE1-213ENST00000578044 KCNQ1DNQ9H478 68 aa8.4□□□□□ -1.06
SMARCE1-213ENST00000578044 MAP1LC3CQ9BXW4 147 aa8.39□□□□□ -1.07
SMARCE1-213ENST00000578044 MYMXA0A1B0GTQ4 84 aa8.38□□□□□ -1.07
SMARCE1-213ENST00000578044 KRTAP4-16G5E9R7 235 aaPredicted RBP8.38□□□□□ -1.07
SMARCE1-213ENST00000578044 ATP6V1G1O75348 118 aa8.38□□□□□ -1.07
SMARCE1-213ENST00000578044 HSBP1O75506 76 aa8.38□□□□□ -1.07
SMARCE1-213ENST00000578044 SPRR4Q96PI1 79 aa8.38□□□□□ -1.07
SMARCE1-213ENST00000578044 KRTAP4-8Q9BYQ9 185 aa8.38□□□□□ -1.07
SMARCE1-213ENST00000578044 TRBV10-2A0A0K0K1G8 114 aa8.36□□□□□ -1.07
SMARCE1-213ENST00000578044 SMIM13P0DJ93 91 aa8.36□□□□□ -1.07
SMARCE1-213ENST00000578044 PLNP26678 52 aa8.36□□□□□ -1.07
SMARCE1-213ENST00000578044 BOD1L2Q8IYS8 172 aa8.36□□□□□ -1.07
SMARCE1-213ENST00000578044 MIR7-3HGQ8N6C7 128 aa8.36□□□□□ -1.07
SMARCE1-213ENST00000578044 HIGD2AQ9BW72 106 aa8.36□□□□□ -1.07
SMARCE1-213ENST00000578044 NDUFA12Q9UI09 145 aa8.36□□□□□ -1.07
SMARCE1-213ENST00000578044 S100A12P80511 92 aa8.35□□□□□ -1.07
SMARCE1-213ENST00000578044 MEIG1Q5JSS6 88 aa8.35□□□□□ -1.07
SMARCE1-213ENST00000578044 FP248Q71RG6 208 aaPredicted RBP8.35□□□□□ -1.07
SMARCE1-213ENST00000578044 LEPROTL1O95214 131 aa8.34□□□□□ -1.07
SMARCE1-213ENST00000578044 NMUP48645 174 aa8.34□□□□□ -1.07
SMARCE1-213ENST00000578044 LEPROTO15243 131 aa8.33□□□□□ -1.08
SMARCE1-213ENST00000578044 LINC00483Q53H64 154 aa8.33□□□□□ -1.08
SMARCE1-213ENST00000578044 IGLV7-46A0A075B6I9 117 aa8.32□□□□□ -1.08
SMARCE1-213ENST00000578044 FAM19A2Q8N3H0 131 aa8.32□□□□□ -1.08
SMARCE1-213ENST00000578044 HSPB8Q9UJY1 196 aa8.32□□□□□ -1.08
SMARCE1-213ENST00000578044 A0A0U1RRA0 63 aa8.31□□□□□ -1.08
SMARCE1-213ENST00000578044 NDUFC2O95298 119 aa8.31□□□□□ -1.08
SMARCE1-213ENST00000578044 SPINK1P00995 79 aa8.31□□□□□ -1.08
SMARCE1-213ENST00000578044 RPS29P62273 56 aaKnown RBP8.31□□□□□ -1.08
SMARCE1-213ENST00000578044 C3orf22Q8N5N4 141 aa8.31□□□□□ -1.08
SMARCE1-213ENST00000578044 ETDCA0A1B0GVM5 59 aa8.3□□□□□ -1.08
SMARCE1-213ENST00000578044 TRGC2P03986 189 aa8.3□□□□□ -1.08
SMARCE1-213ENST00000578044 MUC17Q685J3 4493 aa8.3□□□□□ -1.08
SMARCE1-213ENST00000578044 TRBV10-3A0A0K0K1G6 114 aa8.29□□□□□ -1.08
SMARCE1-213ENST00000578044 C5orf52A6NGY3 159 aa8.29□□□□□ -1.08
SMARCE1-213ENST00000578044 J3QQQ9 107 aa8.29□□□□□ -1.08
SMARCE1-213ENST00000578044 SERF1AO75920 110 aa8.29□□□□□ -1.08
SMARCE1-213ENST00000578044 DPM2O94777 84 aa8.29□□□□□ -1.08
SMARCE1-213ENST00000578044 LINC00310P59036 64 aa8.29□□□□□ -1.08
SMARCE1-213ENST00000578044 HERVK_113P61574 105 aa8.29□□□□□ -1.08
SMARCE1-213ENST00000578044 C4orf48Q5BLP8 95 aa8.29□□□□□ -1.08
SMARCE1-213ENST00000578044 CDIP1Q9H305 208 aa8.29□□□□□ -1.08
SMARCE1-213ENST00000578044 B5MCH6 92 aa8.28□□□□□ -1.08
SMARCE1-213ENST00000578044 SMCR5Q8TEV8 140 aa8.28□□□□□ -1.08
SMARCE1-213ENST00000578044 RETNLBQ9BQ08 111 aa8.28□□□□□ -1.08
SMARCE1-213ENST00000578044 SPANXB1Q9NS25 103 aaPredicted RBP8.28□□□□□ -1.08
SMARCE1-213ENST00000578044 FAT4Q6V0I7 4981 aa8.28□□□□□ -1.08
SMARCE1-213ENST00000578044 NCR3O14931 201 aa8.27□□□□□ -1.09
SMARCE1-213ENST00000578044 TSPEAR-AS2P59090 65 aa8.27□□□□□ -1.09
SMARCE1-213ENST00000578044 SSBP3-AS1Q7Z2R9 100 aa8.27□□□□□ -1.09
SMARCE1-213ENST00000578044 CBY1Q9Y3M2 126 aa8.27□□□□□ -1.09
SMARCE1-213ENST00000578044 IGLV6-57P01721 117 aa8.26□□□□□ -1.09
SMARCE1-213ENST00000578044 DDTP30046 118 aa8.26□□□□□ -1.09
SMARCE1-213ENST00000578044 Q6ZRX8 168 aa8.26□□□□□ -1.09
SMARCE1-213ENST00000578044 MIEN1Q9BRT3 115 aa8.26□□□□□ -1.09
SMARCE1-213ENST00000578044 PPDPFQ9H3Y8 114 aa8.26□□□□□ -1.09
SMARCE1-213ENST00000578044 IGKCP01834 107 aa8.25□□□□□ -1.09
SMARCE1-213ENST00000578044 JOSD1Q15040 202 aaPredicted RBP8.24□□□□□ -1.09
SMARCE1-213ENST00000578044 Q8NBF4 154 aa8.24□□□□□ -1.09
SMARCE1-213ENST00000578044 COLCA2A8K830 154 aa8.23□□□□□ -1.09
SMARCE1-213ENST00000578044 LGALS3P17931 250 aaKnown RBP8.23□□□□□ -1.09
SMARCE1-213ENST00000578044 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.22□□□□□ -1.09
SMARCE1-213ENST00000578044 E9PLD3 99 aa8.22□□□□□ -1.09
SMARCE1-213ENST00000578044 H0Y8G0 127 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 110.8 ms