RNA–Protein interactions for RNA: ENST00000576708.5

NUP88-212, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-212ENST00000576708 TMEM241Q24JQ0 296 aa3.8□□□□□ -1.8
NUP88-212ENST00000576708 REG3GQ6UW15 175 aa3.8□□□□□ -1.8
NUP88-212ENST00000576708 KRTAP11-1Q8IUC1 163 aa3.8□□□□□ -1.8
NUP88-212ENST00000576708 LPAP08519 4548 aa3.8□□□□□ -1.8
NUP88-212ENST00000576708 SMIM27A0A1W2PRY6 76 aa3.79□□□□□ -1.8
NUP88-212ENST00000576708 MT-ND6P03923 174 aa3.79□□□□□ -1.8
NUP88-212ENST00000576708 CKS2P33552 79 aa3.79□□□□□ -1.8
NUP88-212ENST00000576708 C1orf137Q5JT78 98 aa3.79□□□□□ -1.8
NUP88-212ENST00000576708 MRPL54Q6P161 138 aaKnown RBP3.79□□□□□ -1.8
NUP88-212ENST00000576708 C2orf48Q96LS8 159 aa3.79□□□□□ -1.8
NUP88-212ENST00000576708 KIR2DL4Q99706 377 aa3.79□□□□□ -1.8
NUP88-212ENST00000576708 TIMM21Q9BVV7 248 aa3.79□□□□□ -1.8
NUP88-212ENST00000576708 A0A0U1RQV1 116 aa3.78□□□□□ -1.8
NUP88-212ENST00000576708 D6R8Y8 96 aa3.78□□□□□ -1.8
NUP88-212ENST00000576708 PPP1R17O96001 155 aa3.78□□□□□ -1.8
NUP88-212ENST00000576708 NPYP01303 97 aa3.78□□□□□ -1.8
NUP88-212ENST00000576708 KRTAP10-7P60409 375 aaPredicted RBP3.78□□□□□ -1.8
NUP88-212ENST00000576708 FABP9Q0Z7S8 132 aa3.78□□□□□ -1.8
NUP88-212ENST00000576708 RHEBQ15382 184 aa3.78□□□□□ -1.8
NUP88-212ENST00000576708 UNQ6190/PRO20217Q6UXQ8 127 aa3.78□□□□□ -1.8
NUP88-212ENST00000576708 KRTAP7-1Q8IUC3 87 aa3.78□□□□□ -1.8
NUP88-212ENST00000576708 PLEKHB2Q96CS7 222 aa3.78□□□□□ -1.8
NUP88-212ENST00000576708 C20orf78Q9BR46 151 aa3.78□□□□□ -1.8
NUP88-212ENST00000576708 SMIM2Q9BVW6 85 aa3.78□□□□□ -1.8
NUP88-212ENST00000576708 NAT8Q9UHE5 227 aa3.78□□□□□ -1.8
NUP88-212ENST00000576708 TRBV24-1A0A075B6N3 115 aa3.77□□□□□ -1.81
NUP88-212ENST00000576708 IGHV3OR16-9A0A0B4J2B5 98 aa3.77□□□□□ -1.81
NUP88-212ENST00000576708 SMIM1B2RUZ4 78 aa3.77□□□□□ -1.81
NUP88-212ENST00000576708 PMAIP1Q13794 54 aa3.77□□□□□ -1.81
NUP88-212ENST00000576708 ZC2HC1BQ5TFG8 222 aa3.77□□□□□ -1.81
NUP88-212ENST00000576708 MRPL55Q7Z7F7 128 aaKnown RBP3.77□□□□□ -1.81
NUP88-212ENST00000576708 OR10D4PQ8NGN7 298 aa3.77□□□□□ -1.81
NUP88-212ENST00000576708 PRO1933Q9H354 126 aa3.77□□□□□ -1.81
NUP88-212ENST00000576708 C6orf48Q9UBA6 75 aa3.77□□□□□ -1.81
NUP88-212ENST00000576708 A0A087WZ39 114 aa3.76□□□□□ -1.81
NUP88-212ENST00000576708 A0A1B0GXF2 115 aa3.76□□□□□ -1.81
NUP88-212ENST00000576708 C9JAW5 83 aa3.76□□□□□ -1.81
NUP88-212ENST00000576708 IGLV7-43P04211 117 aa3.76□□□□□ -1.81
NUP88-212ENST00000576708 S100A2P29034 98 aa3.76□□□□□ -1.81
NUP88-212ENST00000576708 HBBP68871 147 aa3.76□□□□□ -1.81
NUP88-212ENST00000576708 KIAA0087Q14695 138 aa3.76□□□□□ -1.81
NUP88-212ENST00000576708 C2orf82Q6UX34 121 aa3.76□□□□□ -1.81
NUP88-212ENST00000576708 MRPL35Q9NZE8 188 aaKnown RBP3.76□□□□□ -1.81
NUP88-212ENST00000576708 IGLV4-3A0A075B6K6 122 aa3.75□□□□□ -1.81
NUP88-212ENST00000576708 LOC389332A0A1B0GUA5 103 aa3.75□□□□□ -1.81
NUP88-212ENST00000576708 A6NDN8 102 aa3.75□□□□□ -1.81
NUP88-212ENST00000576708 NDUFA1O15239 70 aa3.75□□□□□ -1.81
NUP88-212ENST00000576708 CFC1BP0CG36 223 aa3.75□□□□□ -1.81
NUP88-212ENST00000576708 CFC1P0CG37 223 aa3.75□□□□□ -1.81
NUP88-212ENST00000576708 MRPS36P82909 103 aaKnown RBP3.75□□□□□ -1.81
NUP88-212ENST00000576708 PEA15Q15121 130 aa3.75□□□□□ -1.81
NUP88-212ENST00000576708 LINC00242Q5T6M2 205 aa3.75□□□□□ -1.81
NUP88-212ENST00000576708 IMMP2LQ96T52 175 aa3.75□□□□□ -1.81
NUP88-212ENST00000576708 C9orf129Q5T035 196 aaKnown RBP3.74□□□□□ -1.81
NUP88-212ENST00000576708 Q5XG85 94 aa3.74□□□□□ -1.81
NUP88-212ENST00000576708 TMEM136Q6ZRR5 245 aa3.74□□□□□ -1.81
NUP88-212ENST00000576708 Q6ZVQ6 151 aa3.74□□□□□ -1.81
NUP88-212ENST00000576708 ORMDL3Q8N138 153 aa3.74□□□□□ -1.81
NUP88-212ENST00000576708 DIRC1Q969H9 104 aa3.74□□□□□ -1.81
NUP88-212ENST00000576708 PRELID3AQ96N28 172 aa3.74□□□□□ -1.81
NUP88-212ENST00000576708 ANAPC13Q9BS18 74 aa3.74□□□□□ -1.81
NUP88-212ENST00000576708 SMDT1Q9H4I9 107 aa3.74□□□□□ -1.81
NUP88-212ENST00000576708 IGLV9-49A0A0B4J1Y8 123 aa3.73□□□□□ -1.81
NUP88-212ENST00000576708 H0Y9J4 135 aa3.73□□□□□ -1.81
NUP88-212ENST00000576708 KRTAP1-4P0C5Y4 121 aa3.73□□□□□ -1.81
NUP88-212ENST00000576708 TLX1NBP0CAT3 122 aa3.73□□□□□ -1.81
NUP88-212ENST00000576708 IFI27P40305 119 aaPredicted RBP3.73□□□□□ -1.81
NUP88-212ENST00000576708 NDUFA6P56556 154 aa3.73□□□□□ -1.81
NUP88-212ENST00000576708 UBE2BP63146 152 aa3.73□□□□□ -1.81
NUP88-212ENST00000576708 HSD52Q0P140 79 aa3.73□□□□□ -1.81
NUP88-212ENST00000576708 HRCT1Q6UXD1 115 aa3.73□□□□□ -1.81
NUP88-212ENST00000576708 TMEM141Q96I45 108 aa3.73□□□□□ -1.81
NUP88-212ENST00000576708 C8orf87E5RJ46 101 aa3.72□□□□□ -1.81
NUP88-212ENST00000576708 UBE2D1P51668 147 aa3.72□□□□□ -1.81
NUP88-212ENST00000576708 LINC00173Q6ZV60 143 aa3.72□□□□□ -1.81
NUP88-212ENST00000576708 GNB1LQ9BYB4 327 aa3.72□□□□□ -1.81
NUP88-212ENST00000576708 TOMM7Q9P0U1 55 aa3.72□□□□□ -1.81
NUP88-212ENST00000576708 PYGO1Q9Y3Y4 419 aa3.72□□□□□ -1.81
NUP88-212ENST00000576708 NDUFC2-KCTD14E9PQ53 114 aa3.71□□□□□ -1.82
NUP88-212ENST00000576708 JOSD1Q15040 202 aaPredicted RBP3.71□□□□□ -1.82
NUP88-212ENST00000576708 KIAA1644Q3SXP7 199 aa3.71□□□□□ -1.82
NUP88-212ENST00000576708 C2orf66Q6UXQ4 117 aa3.71□□□□□ -1.82
NUP88-212ENST00000576708 TEX43Q6ZNM6 134 aa3.71□□□□□ -1.82
NUP88-212ENST00000576708 ATP5L2Q7Z4Y8 100 aa3.71□□□□□ -1.82
NUP88-212ENST00000576708 Q8N8P6 123 aa3.71□□□□□ -1.82
NUP88-212ENST00000576708 AMELXQ99217 191 aa3.71□□□□□ -1.82
NUP88-212ENST00000576708 XAGE1AQ9HD64 81 aa3.71□□□□□ -1.82
NUP88-212ENST00000576708 TRBV30A0A0K0K1B3 111 aa3.7□□□□□ -1.82
NUP88-212ENST00000576708 IGIPA6NJ69 53 aa3.7□□□□□ -1.82
NUP88-212ENST00000576708 NDUFC2O95298 119 aa3.7□□□□□ -1.82
NUP88-212ENST00000576708 MT3P25713 68 aa3.7□□□□□ -1.82
NUP88-212ENST00000576708 Q6ZN92 141 aa3.7□□□□□ -1.82
NUP88-212ENST00000576708 LITAFQ99732 161 aa3.7□□□□□ -1.82
NUP88-212ENST00000576708 CYSLTR1Q9Y271 337 aa3.7□□□□□ -1.82
NUP88-212ENST00000576708 C22orf24Q9Y442 160 aa3.7□□□□□ -1.82
NUP88-212ENST00000576708 IGLV1-50A0A075B6I6 118 aa3.69□□□□□ -1.82
NUP88-212ENST00000576708 PFN2P35080 140 aa3.69□□□□□ -1.82
NUP88-212ENST00000576708 PRR4Q16378 134 aa3.69□□□□□ -1.82
NUP88-212ENST00000576708 GTF2H5Q6ZYL4 71 aa3.69□□□□□ -1.82
NUP88-212ENST00000576708 CDKN2A-AS1Q9UH64 79 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 94.4 ms