RNA–Protein interactions for RNA: ENST00000575783.5

CTDNEP1-211, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-211ENST00000575783 IGLV5-45A0A087WSX0 123 aa8.86□□□□□ -0.99
CTDNEP1-211ENST00000575783 ATP5L2Q7Z4Y8 100 aa8.86□□□□□ -0.99
CTDNEP1-211ENST00000575783 USH2AO75445 5202 aa8.85□□□□□ -0.99
CTDNEP1-211ENST00000575783 K7EMI3 77 aa8.85□□□□□ -0.99
CTDNEP1-211ENST00000575783 GAGE2AQ6NT46 116 aa8.85□□□□□ -0.99
CTDNEP1-211ENST00000575783 TCTE3Q8IZS6 198 aa8.85□□□□□ -0.99
CTDNEP1-211ENST00000575783 TOMM6Q96B49 74 aa8.85□□□□□ -0.99
CTDNEP1-211ENST00000575783 SCGB3A1Q96QR1 104 aa8.85□□□□□ -0.99
CTDNEP1-211ENST00000575783 ERG28Q9UKR5 140 aa8.85□□□□□ -0.99
CTDNEP1-211ENST00000575783 G0S2P27469 103 aa8.84□□□□□ -0.99
CTDNEP1-211ENST00000575783 FLGP20930 4061 aaPredicted RBP8.84□□□□□ -0.99
CTDNEP1-211ENST00000575783 C9JQL5 133 aa8.83□□□□□ -1
CTDNEP1-211ENST00000575783 ADCYAP1P18509 176 aa8.83□□□□□ -1
CTDNEP1-211ENST00000575783 COX6B2Q6YFQ2 88 aa8.83□□□□□ -1
CTDNEP1-211ENST00000575783 SSBP3-AS1Q7Z2R9 100 aa8.83□□□□□ -1
CTDNEP1-211ENST00000575783 ERASQ7Z444 233 aa8.83□□□□□ -1
CTDNEP1-211ENST00000575783 ZNF625Q96I27 306 aaPredicted RBP8.83□□□□□ -1
CTDNEP1-211ENST00000575783 NXT2Q9NPJ8 142 aaKnown RBP8.83□□□□□ -1
CTDNEP1-211ENST00000575783 LINC00483Q53H64 154 aa8.82□□□□□ -1
CTDNEP1-211ENST00000575783 C9orf92A6NGG3 77 aa8.81□□□□□ -1
CTDNEP1-211ENST00000575783 H3BRM9 83 aa8.81□□□□□ -1
CTDNEP1-211ENST00000575783 MRPL18Q9H0U6 180 aaKnown RBP8.81□□□□□ -1
CTDNEP1-211ENST00000575783 CST9LQ9H4G1 147 aa8.81□□□□□ -1
CTDNEP1-211ENST00000575783 COX17Q14061 63 aa8.8□□□□□ -1
CTDNEP1-211ENST00000575783 ETDCA0A1B0GVM5 59 aa8.78□□□□□ -1
CTDNEP1-211ENST00000575783 PRYO14603 147 aa8.77□□□□□ -1.01
CTDNEP1-211ENST00000575783 IGLV5-39A0A0G2JS06 123 aa8.75□□□□□ -1.01
CTDNEP1-211ENST00000575783 LINC00158P58513 81 aa8.75□□□□□ -1.01
CTDNEP1-211ENST00000575783 PMVKQ15126 192 aa8.75□□□□□ -1.01
CTDNEP1-211ENST00000575783 ERC2-IT1O76042 136 aa8.74□□□□□ -1.01
CTDNEP1-211ENST00000575783 SPRR1AP35321 89 aa8.74□□□□□ -1.01
CTDNEP1-211ENST00000575783 FCGBPQ9Y6R7 5405 aaPredicted RBP8.73□□□□□ -1.01
CTDNEP1-211ENST00000575783 A0A0U1RRA0 63 aa8.73□□□□□ -1.01
CTDNEP1-211ENST00000575783 PEA15Q15121 130 aa8.73□□□□□ -1.01
CTDNEP1-211ENST00000575783 C9orf153Q5TBE3 101 aa8.73□□□□□ -1.01
CTDNEP1-211ENST00000575783 KCNQ1DNQ9H478 68 aa8.73□□□□□ -1.01
CTDNEP1-211ENST00000575783 KRTAP4-16G5E9R7 235 aaPredicted RBP8.72□□□□□ -1.01
CTDNEP1-211ENST00000575783 NCR3O14931 201 aa8.72□□□□□ -1.01
CTDNEP1-211ENST00000575783 SYNE2Q8WXH0 6885 aaKnown RBP8.7□□□□□ -1.02
CTDNEP1-211ENST00000575783 KIAA1644Q3SXP7 199 aa8.7□□□□□ -1.02
CTDNEP1-211ENST00000575783 NDUFA6P56556 154 aa8.69□□□□□ -1.02
CTDNEP1-211ENST00000575783 BOD1L2Q8IYS8 172 aa8.69□□□□□ -1.02
CTDNEP1-211ENST00000575783 B5MCH6 92 aa8.68□□□□□ -1.02
CTDNEP1-211ENST00000575783 IGLC3P0DOY3 106 aa8.68□□□□□ -1.02
CTDNEP1-211ENST00000575783 ZNF22P17026 224 aaPredicted RBP8.68□□□□□ -1.02
CTDNEP1-211ENST00000575783 TRBV10-3A0A0K0K1G6 114 aa8.67□□□□□ -1.02
CTDNEP1-211ENST00000575783 LINC01549A6NIU2 74 aa8.67□□□□□ -1.02
CTDNEP1-211ENST00000575783 IGLV6-57P01721 117 aa8.67□□□□□ -1.02
CTDNEP1-211ENST00000575783 ATP6V1G1O75348 118 aa8.66□□□□□ -1.02
CTDNEP1-211ENST00000575783 SFTA2Q6UW10 78 aa8.66□□□□□ -1.02
CTDNEP1-211ENST00000575783 HRCT1Q6UXD1 115 aa8.66□□□□□ -1.02
CTDNEP1-211ENST00000575783 TRAV9-1A0A075B6T8 112 aa8.65□□□□□ -1.02
CTDNEP1-211ENST00000575783 S100A12P80511 92 aa8.65□□□□□ -1.02
CTDNEP1-211ENST00000575783 Q9BRP9 147 aa8.65□□□□□ -1.02
CTDNEP1-211ENST00000575783 MACF1Q9UPN3 7388 aaKnown RBP8.65□□□□□ -1.03
CTDNEP1-211ENST00000575783 LIMD2Q9BT23 127 aa8.64□□□□□ -1.03
CTDNEP1-211ENST00000575783 MT-ND4LP03901 98 aa8.62□□□□□ -1.03
CTDNEP1-211ENST00000575783 SMIM13P0DJ93 91 aa8.62□□□□□ -1.03
CTDNEP1-211ENST00000575783 TMEM170BQ5T4T1 132 aa8.62□□□□□ -1.03
CTDNEP1-211ENST00000575783 LINC01546A6NGU7 62 aa8.61□□□□□ -1.03
CTDNEP1-211ENST00000575783 Q6Q795 121 aa8.61□□□□□ -1.03
CTDNEP1-211ENST00000575783 CFC1P0CG37 223 aa8.6□□□□□ -1.03
CTDNEP1-211ENST00000575783 ANAPC16Q96DE5 110 aa8.6□□□□□ -1.03
CTDNEP1-211ENST00000575783 Q6ZRX8 168 aa8.59□□□□□ -1.03
CTDNEP1-211ENST00000575783 FA2HQ7L5A8 372 aa8.59□□□□□ -1.03
CTDNEP1-211ENST00000575783 MIR7-3HGQ8N6C7 128 aa8.59□□□□□ -1.03
CTDNEP1-211ENST00000575783 C11orf86A6NJI1 115 aa8.58□□□□□ -1.04
CTDNEP1-211ENST00000575783 RPL37P61927 97 aaKnown RBP8.58□□□□□ -1.04
CTDNEP1-211ENST00000575783 MEIG1Q5JSS6 88 aa8.58□□□□□ -1.04
CTDNEP1-211ENST00000575783 ST20-AS1Q8NBB2 130 aa8.58□□□□□ -1.04
CTDNEP1-211ENST00000575783 SMCO4Q9NRQ5 59 aa8.58□□□□□ -1.04
CTDNEP1-211ENST00000575783 DDTP30046 118 aa8.57□□□□□ -1.04
CTDNEP1-211ENST00000575783 KRTAP19-1Q8IUB9 90 aa8.55□□□□□ -1.04
CTDNEP1-211ENST00000575783 BAGE3Q86Y29 109 aa8.54□□□□□ -1.04
CTDNEP1-211ENST00000575783 KRTAP9-8Q9BYQ0 159 aa8.54□□□□□ -1.04
CTDNEP1-211ENST00000575783 JOSD1Q15040 202 aaPredicted RBP8.53□□□□□ -1.04
CTDNEP1-211ENST00000575783 hCG_2014768A0A024R1R8 64 aa8.51□□□□□ -1.05
CTDNEP1-211ENST00000575783 A0A096LNJ9 63 aa8.5□□□□□ -1.05
CTDNEP1-211ENST00000575783 H7C2G1 150 aa8.5□□□□□ -1.05
CTDNEP1-211ENST00000575783 TMEM223A0PJW6 202 aa8.49□□□□□ -1.05
CTDNEP1-211ENST00000575783 S100A7L2Q5SY68 101 aa8.48□□□□□ -1.05
CTDNEP1-211ENST00000575783 TRBV10-2A0A0K0K1G8 114 aa8.47□□□□□ -1.05
CTDNEP1-211ENST00000575783 LINC00587B1AMM8 73 aa8.47□□□□□ -1.05
CTDNEP1-211ENST00000575783 HERV-K104P63124 156 aa8.47□□□□□ -1.05
CTDNEP1-211ENST00000575783 PMCHL1Q16048 86 aa8.47□□□□□ -1.05
CTDNEP1-211ENST00000575783 MAP1LC3CQ9BXW4 147 aa8.47□□□□□ -1.05
CTDNEP1-211ENST00000575783 CHTOPQ9Y3Y2 248 aaKnown RBP8.47□□□□□ -1.05
CTDNEP1-211ENST00000575783 C1orf195Q5TG92 126 aa8.46□□□□□ -1.06
CTDNEP1-211ENST00000575783 SLC25A34Q6PIV7 304 aa8.46□□□□□ -1.06
CTDNEP1-211ENST00000575783 TRAV23DV6A0A075B6W5 121 aa8.45□□□□□ -1.06
CTDNEP1-211ENST00000575783 HBDP02042 147 aa8.45□□□□□ -1.06
CTDNEP1-211ENST00000575783 LAMTOR3Q9UHA4 124 aa8.45□□□□□ -1.06
CTDNEP1-211ENST00000575783 C5orf52A6NGY3 159 aa8.44□□□□□ -1.06
CTDNEP1-211ENST00000575783 FABP9Q0Z7S8 132 aa8.44□□□□□ -1.06
CTDNEP1-211ENST00000575783 ZNF73O43830 326 aaPredicted RBP8.43□□□□□ -1.06
CTDNEP1-211ENST00000575783 SPANXB1Q9NS25 103 aaPredicted RBP8.43□□□□□ -1.06
CTDNEP1-211ENST00000575783 SPRR1BP22528 89 aa8.42□□□□□ -1.06
CTDNEP1-211ENST00000575783 CD164Q04900 197 aa8.42□□□□□ -1.06
CTDNEP1-211ENST00000575783 LOC107984156A0A0G2JMH3 177 aa8.41□□□□□ -1.06
CTDNEP1-211ENST00000575783 MYMXA0A1B0GTQ4 84 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 137.3 ms