RNA–Protein interactions for RNA: ENST00000575454.1

SMG6-218, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 652 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-218ENST00000575454 SFTA2Q6UW10 78 aa5.02□□□□□ -1.61
SMG6-218ENST00000575454 CST9LQ9H4G1 147 aa5.02□□□□□ -1.61
SMG6-218ENST00000575454 ERG28Q9UKR5 140 aa5.02□□□□□ -1.61
SMG6-218ENST00000575454 LCE2CQ5TA81 110 aa5.01□□□□□ -1.61
SMG6-218ENST00000575454 IGLV5-39A0A0G2JS06 123 aa5□□□□□ -1.61
SMG6-218ENST00000575454 PMVKQ15126 192 aa5□□□□□ -1.61
SMG6-218ENST00000575454 SSBP3-AS1Q7Z2R9 100 aa5□□□□□ -1.61
SMG6-218ENST00000575454 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.99□□□□□ -1.61
SMG6-218ENST00000575454 MT-ND4LP03901 98 aa4.99□□□□□ -1.61
SMG6-218ENST00000575454 ADCYAP1P18509 176 aa4.99□□□□□ -1.61
SMG6-218ENST00000575454 MT1HP80294 61 aa4.99□□□□□ -1.61
SMG6-218ENST00000575454 LINC00483Q53H64 154 aa4.99□□□□□ -1.61
SMG6-218ENST00000575454 Q8N377 158 aa4.99□□□□□ -1.61
SMG6-218ENST00000575454 ANAPC16Q96DE5 110 aa4.99□□□□□ -1.61
SMG6-218ENST00000575454 SSPOA2VEC9 5147 aa4.98□□□□□ -1.61
SMG6-218ENST00000575454 SMCR5Q8TEV8 140 aa4.98□□□□□ -1.61
SMG6-218ENST00000575454 PRYO14603 147 aa4.97□□□□□ -1.61
SMG6-218ENST00000575454 S100A12P80511 92 aa4.97□□□□□ -1.61
SMG6-218ENST00000575454 ETDCA0A1B0GVM5 59 aa4.96□□□□□ -1.62
SMG6-218ENST00000575454 LINC01546A6NGU7 62 aa4.96□□□□□ -1.62
SMG6-218ENST00000575454 IGLC3P0DOY3 106 aa4.96□□□□□ -1.62
SMG6-218ENST00000575454 MOBPQ13875 183 aa4.96□□□□□ -1.62
SMG6-218ENST00000575454 KRTAP19-2Q3LHN2 52 aa4.96□□□□□ -1.62
SMG6-218ENST00000575454 GAGE2AQ6NT46 116 aa4.96□□□□□ -1.62
SMG6-218ENST00000575454 Q8NDZ9 215 aa4.96□□□□□ -1.62
SMG6-218ENST00000575454 KCNQ1DNQ9H478 68 aa4.96□□□□□ -1.62
SMG6-218ENST00000575454 IGLV9-49A0A0B4J1Y8 123 aa4.95□□□□□ -1.62
SMG6-218ENST00000575454 LORP23490 312 aaPredicted RBP4.95□□□□□ -1.62
SMG6-218ENST00000575454 SPRR1AP35321 89 aa4.95□□□□□ -1.62
SMG6-218ENST00000575454 LINC00158P58513 81 aa4.95□□□□□ -1.62
SMG6-218ENST00000575454 ZNF625Q96I27 306 aaPredicted RBP4.95□□□□□ -1.62
SMG6-218ENST00000575454 IGLV8-61A0A075B6I0 122 aa4.94□□□□□ -1.62
SMG6-218ENST00000575454 M0R2T5 61 aa4.94□□□□□ -1.62
SMG6-218ENST00000575454 ATP6V1G1O75348 118 aa4.94□□□□□ -1.62
SMG6-218ENST00000575454 KRTAP10-6P60371 365 aaPredicted RBP4.94□□□□□ -1.62
SMG6-218ENST00000575454 USH2AO75445 5202 aa4.94□□□□□ -1.62
SMG6-218ENST00000575454 ZNF22P17026 224 aaPredicted RBP4.93□□□□□ -1.62
SMG6-218ENST00000575454 NDUFA6P56556 154 aa4.93□□□□□ -1.62
SMG6-218ENST00000575454 KIAA1644Q3SXP7 199 aa4.93□□□□□ -1.62
SMG6-218ENST00000575454 PCOTHQ58A44 107 aa4.93□□□□□ -1.62
SMG6-218ENST00000575454 FA2HQ7L5A8 372 aa4.93□□□□□ -1.62
SMG6-218ENST00000575454 SMCO4Q9NRQ5 59 aa4.93□□□□□ -1.62
SMG6-218ENST00000575454 SYNE2Q8WXH0 6885 aaKnown RBP4.93□□□□□ -1.62
SMG6-218ENST00000575454 TRAV9-1A0A075B6T8 112 aa4.92□□□□□ -1.62
SMG6-218ENST00000575454 KRTAP4-16G5E9R7 235 aaPredicted RBP4.92□□□□□ -1.62
SMG6-218ENST00000575454 BOD1L2Q8IYS8 172 aa4.92□□□□□ -1.62
SMG6-218ENST00000575454 LINC00587B1AMM8 73 aa4.91□□□□□ -1.62
SMG6-218ENST00000575454 TMEM170BQ5T4T1 132 aa4.91□□□□□ -1.62
SMG6-218ENST00000575454 B5MCH6 92 aa4.9□□□□□ -1.63
SMG6-218ENST00000575454 hCG_2014768A0A024R1R8 64 aa4.89□□□□□ -1.63
SMG6-218ENST00000575454 TRBV10-3A0A0K0K1G6 114 aa4.89□□□□□ -1.63
SMG6-218ENST00000575454 A0A0U1RRA0 63 aa4.89□□□□□ -1.63
SMG6-218ENST00000575454 NCR3O14931 201 aa4.89□□□□□ -1.63
SMG6-218ENST00000575454 C9orf153Q5TBE3 101 aa4.89□□□□□ -1.63
SMG6-218ENST00000575454 LIMD2Q9BT23 127 aa4.89□□□□□ -1.63
SMG6-218ENST00000575454 FCGBPQ9Y6R7 5405 aaPredicted RBP4.88□□□□□ -1.63
SMG6-218ENST00000575454 HERV-K104P63124 156 aa4.88□□□□□ -1.63
SMG6-218ENST00000575454 JOSD1Q15040 202 aaPredicted RBP4.88□□□□□ -1.63
SMG6-218ENST00000575454 COX19Q49B96 90 aa4.88□□□□□ -1.63
SMG6-218ENST00000575454 MEIG1Q5JSS6 88 aa4.88□□□□□ -1.63
SMG6-218ENST00000575454 COX6B2Q6YFQ2 88 aa4.88□□□□□ -1.63
SMG6-218ENST00000575454 C5orf52A6NGY3 159 aa4.87□□□□□ -1.63
SMG6-218ENST00000575454 C11orf86A6NJI1 115 aa4.87□□□□□ -1.63
SMG6-218ENST00000575454 ERC2-IT1O76042 136 aa4.87□□□□□ -1.63
SMG6-218ENST00000575454 SMIM13P0DJ93 91 aa4.87□□□□□ -1.63
SMG6-218ENST00000575454 Q6ZRX8 168 aa4.87□□□□□ -1.63
SMG6-218ENST00000575454 BAGE3Q86Y29 109 aa4.87□□□□□ -1.63
SMG6-218ENST00000575454 MIR7-3HGQ8N6C7 128 aa4.87□□□□□ -1.63
SMG6-218ENST00000575454 MAP1LC3CQ9BXW4 147 aa4.87□□□□□ -1.63
SMG6-218ENST00000575454 TRBV10-2A0A0K0K1G8 114 aa4.86□□□□□ -1.63
SMG6-218ENST00000575454 HBDP02042 147 aa4.86□□□□□ -1.63
SMG6-218ENST00000575454 S100PP25815 95 aa4.86□□□□□ -1.63
SMG6-218ENST00000575454 DDTP30046 118 aa4.86□□□□□ -1.63
SMG6-218ENST00000575454 Q9BRP9 147 aa4.86□□□□□ -1.63
SMG6-218ENST00000575454 C9orf92A6NGG3 77 aa4.85□□□□□ -1.63
SMG6-218ENST00000575454 FABP9Q0Z7S8 132 aa4.85□□□□□ -1.63
SMG6-218ENST00000575454 SLC25A34Q6PIV7 304 aa4.85□□□□□ -1.63
SMG6-218ENST00000575454 CHTOPQ9Y3Y2 248 aaKnown RBP4.85□□□□□ -1.63
SMG6-218ENST00000575454 FLGP20930 4061 aaPredicted RBP4.85□□□□□ -1.63
SMG6-218ENST00000575454 A0A096LNJ9 63 aa4.84□□□□□ -1.63
SMG6-218ENST00000575454 TMEM223A0PJW6 202 aa4.84□□□□□ -1.63
SMG6-218ENST00000575454 LINC00614P0C842 121 aa4.84□□□□□ -1.63
SMG6-218ENST00000575454 SEC11CQ9BY50 192 aa4.84□□□□□ -1.63
SMG6-218ENST00000575454 LOC107984156A0A0G2JMH3 177 aa4.83□□□□□ -1.64
SMG6-218ENST00000575454 MYMXA0A1B0GTQ4 84 aa4.83□□□□□ -1.64
SMG6-218ENST00000575454 IGLV6-57P01721 117 aa4.83□□□□□ -1.64
SMG6-218ENST00000575454 ARL17AQ8IVW1 177 aa4.83□□□□□ -1.64
SMG6-218ENST00000575454 SPANXB1Q9NS25 103 aaPredicted RBP4.83□□□□□ -1.64
SMG6-218ENST00000575454 HINT1P49773 126 aaPredicted RBP4.82□□□□□ -1.64
SMG6-218ENST00000575454 S100A7L2Q5SY68 101 aa4.82□□□□□ -1.64
SMG6-218ENST00000575454 CBY1Q9Y3M2 126 aa4.82□□□□□ -1.64
SMG6-218ENST00000575454 MACF1Q9UPN3 7388 aaKnown RBP4.82□□□□□ -1.64
SMG6-218ENST00000575454 TRAV12-1A0A0B4J245 112 aa4.81□□□□□ -1.64
SMG6-218ENST00000575454 IFITM2Q01629 132 aa4.81□□□□□ -1.64
SMG6-218ENST00000575454 MIEN1Q9BRT3 115 aa4.81□□□□□ -1.64
SMG6-218ENST00000575454 TRAV23DV6A0A075B6W5 121 aa4.8□□□□□ -1.64
SMG6-218ENST00000575454 ZNF73O43830 326 aaPredicted RBP4.8□□□□□ -1.64
SMG6-218ENST00000575454 NDUFC2O95298 119 aa4.8□□□□□ -1.64
SMG6-218ENST00000575454 CD164Q04900 197 aa4.8□□□□□ -1.64
SMG6-218ENST00000575454 PMCHL1Q16048 86 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms