RNA–Protein interactions for RNA: ENST00000575185.1

SPNS3-203, Transcript of sphingolipid transporter 3 (putative), humanhuman

TSL 5

Gene SPNS3, Length 496 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS3-203ENST00000575185 DIRC1Q969H9 104 aa12.52□□□□□ -0.41
SPNS3-203ENST00000575185 PMCHL2Q9BQD1 86 aa12.52□□□□□ -0.41
SPNS3-203ENST00000575185 NDUFC2-KCTD14E9PQ53 114 aa12.51□□□□□ -0.41
SPNS3-203ENST00000575185 PRR4Q16378 134 aa12.51□□□□□ -0.41
SPNS3-203ENST00000575185 H0Y9J4 135 aa12.5□□□□□ -0.41
SPNS3-203ENST00000575185 PLEKHB2Q96CS7 222 aa12.5□□□□□ -0.41
SPNS3-203ENST00000575185 HIST1H2BLQ99880 126 aa12.49□□□□□ -0.41
SPNS3-203ENST00000575185 SNRPEP62304 92 aaKnown RBP12.48□□□□□ -0.41
SPNS3-203ENST00000575185 FAM168BA1KXE4 195 aa12.47□□□□□ -0.41
SPNS3-203ENST00000575185 LEPROTO15243 131 aa12.47□□□□□ -0.41
SPNS3-203ENST00000575185 KRTAP1-4P0C5Y4 121 aa12.47□□□□□ -0.41
SPNS3-203ENST00000575185 C5orf52A6NGY3 159 aa12.46□□□□□ -0.41
SPNS3-203ENST00000575185 HERV-K104P63124 156 aa12.45□□□□□ -0.42
SPNS3-203ENST00000575185 COX17Q14061 63 aa12.45□□□□□ -0.42
SPNS3-203ENST00000575185 GAGE2EQ4V326 116 aa12.45□□□□□ -0.42
SPNS3-203ENST00000575185 ZNF625Q96I27 306 aaPredicted RBP12.45□□□□□ -0.42
SPNS3-203ENST00000575185 GAGE2DQ9UEU5 116 aa12.45□□□□□ -0.42
SPNS3-203ENST00000575185 IGLV1-50A0A075B6I6 118 aa12.44□□□□□ -0.42
SPNS3-203ENST00000575185 A0A0U1RQV1 116 aa12.44□□□□□ -0.42
SPNS3-203ENST00000575185 MYMXA0A1B0GTQ4 84 aa12.44□□□□□ -0.42
SPNS3-203ENST00000575185 LINC00587B1AMM8 73 aa12.44□□□□□ -0.42
SPNS3-203ENST00000575185 E9PLD3 99 aa12.43□□□□□ -0.42
SPNS3-203ENST00000575185 LGALS3P17931 250 aaKnown RBP12.43□□□□□ -0.42
SPNS3-203ENST00000575185 NMUP48645 174 aa12.43□□□□□ -0.42
SPNS3-203ENST00000575185 NDUFA12Q9UI09 145 aa12.43□□□□□ -0.42
SPNS3-203ENST00000575185 ERG28Q9UKR5 140 aa12.43□□□□□ -0.42
SPNS3-203ENST00000575185 J3QQQ9 107 aa12.42□□□□□ -0.42
SPNS3-203ENST00000575185 KRTAP9-6A0A140TA67 174 aa12.41□□□□□ -0.42
SPNS3-203ENST00000575185 LCE2AQ5TA79 106 aaPredicted RBP12.41□□□□□ -0.42
SPNS3-203ENST00000575185 FAM19A5Q7Z5A7 132 aaPredicted RBP12.41□□□□□ -0.42
SPNS3-203ENST00000575185 PFN2P35080 140 aa12.39□□□□□ -0.43
SPNS3-203ENST00000575185 MEIG1Q5JSS6 88 aa12.38□□□□□ -0.43
SPNS3-203ENST00000575185 KRTAP7-1Q8IUC3 87 aa12.38□□□□□ -0.43
SPNS3-203ENST00000575185 LINC00158P58513 81 aa12.36□□□□□ -0.43
SPNS3-203ENST00000575185 TSPEAR-AS2P59090 65 aa12.36□□□□□ -0.43
SPNS3-203ENST00000575185 C9orf129Q5T035 196 aaKnown RBP12.36□□□□□ -0.43
SPNS3-203ENST00000575185 XAGE1AQ9HD64 81 aa12.36□□□□□ -0.43
SPNS3-203ENST00000575185 HSBP1L1C9JCN9 74 aa12.33□□□□□ -0.44
SPNS3-203ENST00000575185 RPL13AP40429 203 aaKnown RBP12.33□□□□□ -0.44
SPNS3-203ENST00000575185 MUC17Q685J3 4493 aa12.33□□□□□ -0.44
SPNS3-203ENST00000575185 M0QXV9 152 aa12.32□□□□□ -0.44
SPNS3-203ENST00000575185 TSPAN13O95857 204 aa12.32□□□□□ -0.44
SPNS3-203ENST00000575185 UBE2BP63146 152 aa12.32□□□□□ -0.44
SPNS3-203ENST00000575185 ATOH7Q8N100 152 aa12.32□□□□□ -0.44
SPNS3-203ENST00000575185 SND1-IT1Q9HBX3 110 aa12.31□□□□□ -0.44
SPNS3-203ENST00000575185 TMA7Q9Y2S6 64 aaKnown RBP12.31□□□□□ -0.44
SPNS3-203ENST00000575185 SCGB1D1O95968 90 aa12.3□□□□□ -0.44
SPNS3-203ENST00000575185 SMIM13P0DJ93 91 aa12.3□□□□□ -0.44
SPNS3-203ENST00000575185 RPL24P83731 157 aaKnown RBP12.29□□□□□ -0.44
SPNS3-203ENST00000575185 LBHQ53QV2 105 aaPredicted RBP12.29□□□□□ -0.44
SPNS3-203ENST00000575185 TP73-AS1Q9UF72 201 aa12.29□□□□□ -0.44
SPNS3-203ENST00000575185 A0A0U1RRA0 63 aa12.28□□□□□ -0.44
SPNS3-203ENST00000575185 ZNF815PA8K554 130 aa12.28□□□□□ -0.44
SPNS3-203ENST00000575185 IGKV2D-26A0A0A0MRZ7 120 aa12.27□□□□□ -0.45
SPNS3-203ENST00000575185 MIR7-3HGQ8N6C7 128 aa12.27□□□□□ -0.45
SPNS3-203ENST00000575185 IGLV5-37A0A075B6J1 123 aa12.26□□□□□ -0.45
SPNS3-203ENST00000575185 A0A0J9YXY3 114 aa12.26□□□□□ -0.45
SPNS3-203ENST00000575185 ANKRD39Q53RE8 183 aa12.26□□□□□ -0.45
SPNS3-203ENST00000575185 NKAPP1Q8N9T2 125 aa12.26□□□□□ -0.45
SPNS3-203ENST00000575185 C22orf24Q9Y442 160 aa12.25□□□□□ -0.45
SPNS3-203ENST00000575185 TIMM17BO60830 172 aa12.24□□□□□ -0.45
SPNS3-203ENST00000575185 MRPL55Q7Z7F7 128 aaKnown RBP12.24□□□□□ -0.45
SPNS3-203ENST00000575185 MIEN1Q9BRT3 115 aa12.23□□□□□ -0.45
SPNS3-203ENST00000575185 A0A087X002 238 aa12.22□□□□□ -0.45
SPNS3-203ENST00000575185 ZNF861PO60384 105 aa12.21□□□□□ -0.45
SPNS3-203ENST00000575185 VPREB1P12018 145 aa12.21□□□□□ -0.45
SPNS3-203ENST00000575185 SCGB1D4Q6XE38 83 aa12.21□□□□□ -0.45
SPNS3-203ENST00000575185 LOC107984156A0A0G2JMH3 177 aa12.2□□□□□ -0.46
SPNS3-203ENST00000575185 JOSD1Q15040 202 aaPredicted RBP12.2□□□□□ -0.46
SPNS3-203ENST00000575185 ARL17AQ8IVW1 177 aa12.2□□□□□ -0.46
SPNS3-203ENST00000575185 BOD1L2Q8IYS8 172 aa12.19□□□□□ -0.46
SPNS3-203ENST00000575185 TMEM238C9JI98 176 aa12.18□□□□□ -0.46
SPNS3-203ENST00000575185 TTTY13Q9BZ97 58 aa12.18□□□□□ -0.46
SPNS3-203ENST00000575185 DAND5Q8N907 189 aa12.17□□□□□ -0.46
SPNS3-203ENST00000575185 COPS9Q8WXC6 57 aa12.17□□□□□ -0.46
SPNS3-203ENST00000575185 LINC00167Q96N53 147 aa12.17□□□□□ -0.46
SPNS3-203ENST00000575185 PCP2Q8IVA1 136 aa12.16□□□□□ -0.46
SPNS3-203ENST00000575185 RETNLBQ9BQ08 111 aa12.16□□□□□ -0.46
SPNS3-203ENST00000575185 M0R378 163 aa12.15□□□□□ -0.46
SPNS3-203ENST00000575185 Q6ZVH6 145 aa12.15□□□□□ -0.46
SPNS3-203ENST00000575185 LITAFQ99732 161 aa12.15□□□□□ -0.46
SPNS3-203ENST00000575185 NDUFC2O95298 119 aa12.14□□□□□ -0.47
SPNS3-203ENST00000575185 ADAMTSL4-AS1Q5T5F5 129 aa12.14□□□□□ -0.47
SPNS3-203ENST00000575185 VAMP8Q9BV40 100 aa12.14□□□□□ -0.47
SPNS3-203ENST00000575185 GAGE10A6NGK3 116 aa12.13□□□□□ -0.47
SPNS3-203ENST00000575185 TYMSOSQ8TAI1 123 aa12.13□□□□□ -0.47
SPNS3-203ENST00000575185 SPANXDQ9BXN6 97 aa12.13□□□□□ -0.47
SPNS3-203ENST00000575185 SPANXCQ9NY87 97 aa12.13□□□□□ -0.47
SPNS3-203ENST00000575185 TRBV10-2A0A0K0K1G8 114 aa12.11□□□□□ -0.47
SPNS3-203ENST00000575185 RPL37AP8A6NKH3 93 aa12.11□□□□□ -0.47
SPNS3-203ENST00000575185 LINC00308Q8TCZ7 52 aa12.11□□□□□ -0.47
SPNS3-203ENST00000575185 SPANXB1Q9NS25 103 aaPredicted RBP12.11□□□□□ -0.47
SPNS3-203ENST00000575185 ANAPC11Q9NYG5 84 aa12.11□□□□□ -0.47
SPNS3-203ENST00000575185 IFITM1P13164 125 aa12.1□□□□□ -0.47
SPNS3-203ENST00000575185 S100A12P80511 92 aa12.1□□□□□ -0.47
SPNS3-203ENST00000575185 Q8NDZ9 215 aa12.1□□□□□ -0.47
SPNS3-203ENST00000575185 PPDPFQ9H3Y8 114 aa12.1□□□□□ -0.47
SPNS3-203ENST00000575185 NCR3O14931 201 aa12.09□□□□□ -0.47
SPNS3-203ENST00000575185 COX8AP10176 69 aa12.09□□□□□ -0.47
SPNS3-203ENST00000575185 CRYGAP11844 174 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms