RNA–Protein interactions for RNA: ENST00000574848.5

LITAF-216, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-216ENST00000574848 Q5VSD8 79 aa6.94□□□□□ -1.3
LITAF-216ENST00000574848 UBE2WQ96B02 151 aa6.94□□□□□ -1.3
LITAF-216ENST00000574848 SPCS1Q9Y6A9 102 aa6.94□□□□□ -1.3
LITAF-216ENST00000574848 IGKV2D-24A0A075B6R9 120 aa6.93□□□□□ -1.3
LITAF-216ENST00000574848 CFC1BP0CG36 223 aa6.93□□□□□ -1.3
LITAF-216ENST00000574848 CFC1P0CG37 223 aa6.93□□□□□ -1.3
LITAF-216ENST00000574848 ENHOQ6UWT2 76 aa6.93□□□□□ -1.3
LITAF-216ENST00000574848 LECT2O14960 151 aa6.92□□□□□ -1.3
LITAF-216ENST00000574848 FAM30AQ9NZY2 134 aa6.92□□□□□ -1.3
LITAF-216ENST00000574848 ERG28Q9UKR5 140 aa6.92□□□□□ -1.3
LITAF-216ENST00000574848 IGLV10-54A0A075B6I4 117 aa6.91□□□□□ -1.3
LITAF-216ENST00000574848 GAGE12HA6NDE8 117 aa6.91□□□□□ -1.3
LITAF-216ENST00000574848 TSPAN13O95857 204 aa6.91□□□□□ -1.3
LITAF-216ENST00000574848 LINC00158P58513 81 aa6.91□□□□□ -1.3
LITAF-216ENST00000574848 Q1RN00 199 aa6.91□□□□□ -1.3
LITAF-216ENST00000574848 ADAMTSL4-AS1Q5T5F5 129 aa6.91□□□□□ -1.3
LITAF-216ENST00000574848 LINC00308Q8TCZ7 52 aa6.91□□□□□ -1.3
LITAF-216ENST00000574848 C1orf43Q9BWL3 253 aa6.91□□□□□ -1.3
LITAF-216ENST00000574848 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.9□□□□□ -1.3
LITAF-216ENST00000574848 TRBV20-1A0A075B6N2 111 aa6.9□□□□□ -1.3
LITAF-216ENST00000574848 HAMPP81172 84 aa6.9□□□□□ -1.3
LITAF-216ENST00000574848 FOXI1Q12951 378 aa6.9□□□□□ -1.3
LITAF-216ENST00000574848 COX17Q14061 63 aa6.9□□□□□ -1.3
LITAF-216ENST00000574848 C14orf177Q52M58 125 aa6.9□□□□□ -1.3
LITAF-216ENST00000574848 NAA38Q9BRA0 125 aaKnown RBP6.9□□□□□ -1.3
LITAF-216ENST00000574848 LOC107984156A0A0G2JMH3 177 aa6.89□□□□□ -1.31
LITAF-216ENST00000574848 INAFM2P0DMQ5 153 aa6.89□□□□□ -1.31
LITAF-216ENST00000574848 PSMB2P49721 201 aa6.89□□□□□ -1.31
LITAF-216ENST00000574848 KRTAP26-1Q6PEX3 210 aa6.89□□□□□ -1.31
LITAF-216ENST00000574848 ARL17AQ8IVW1 177 aa6.89□□□□□ -1.31
LITAF-216ENST00000574848 SRRM2Q9UQ35 2752 aaKnown RBP6.88□□□□□ -1.31
LITAF-216ENST00000574848 MYCBP2O75592 4640 aa6.88□□□□□ -1.31
LITAF-216ENST00000574848 FAM229AH3BQW9 127 aa6.88□□□□□ -1.31
LITAF-216ENST00000574848 SMR3BP02814 79 aaPredicted RBP6.88□□□□□ -1.31
LITAF-216ENST00000574848 COX6CP09669 75 aa6.88□□□□□ -1.31
LITAF-216ENST00000574848 NPC2P61916 151 aa6.88□□□□□ -1.31
LITAF-216ENST00000574848 SPAG11BQ08648 103 aa6.88□□□□□ -1.31
LITAF-216ENST00000574848 MIR7-3HGQ8N6C7 128 aa6.88□□□□□ -1.31
LITAF-216ENST00000574848 DAND5Q8N907 189 aa6.88□□□□□ -1.31
LITAF-216ENST00000574848 TRAV13-2A0A0B4J235 113 aa6.87□□□□□ -1.31
LITAF-216ENST00000574848 A0A0U1RRA0 63 aa6.87□□□□□ -1.31
LITAF-216ENST00000574848 SCGB1C2P0DMR2 95 aa6.87□□□□□ -1.31
LITAF-216ENST00000574848 TRBV30A0A0K0K1B3 111 aa6.86□□□□□ -1.31
LITAF-216ENST00000574848 USP17L23D6RBM5 183 aa6.86□□□□□ -1.31
LITAF-216ENST00000574848 F8WDY8 70 aa6.86□□□□□ -1.31
LITAF-216ENST00000574848 F8W1H4 67 aa6.85□□□□□ -1.31
LITAF-216ENST00000574848 ZNF561-AS1K7EIQ3 104 aa6.85□□□□□ -1.31
LITAF-216ENST00000574848 PFN2P35080 140 aa6.85□□□□□ -1.31
LITAF-216ENST00000574848 RPL13AP40429 203 aaKnown RBP6.85□□□□□ -1.31
LITAF-216ENST00000574848 KIAA0087Q14695 138 aa6.85□□□□□ -1.31
LITAF-216ENST00000574848 LINC01620Q4KN68 170 aa6.85□□□□□ -1.31
LITAF-216ENST00000574848 SCXQ7RTU7 201 aa6.85□□□□□ -1.31
LITAF-216ENST00000574848 SND1-IT1Q9HBX3 110 aa6.85□□□□□ -1.31
LITAF-216ENST00000574848 HERC1Q15751 4861 aa6.85□□□□□ -1.31
LITAF-216ENST00000574848 H7C2G1 150 aa6.84□□□□□ -1.31
LITAF-216ENST00000574848 LINC00528Q8N1L1 170 aa6.84□□□□□ -1.31
LITAF-216ENST00000574848 DMBT1Q9UGM3 2413 aaPredicted RBP6.84□□□□□ -1.32
LITAF-216ENST00000574848 GVQW2A0A096LPI5 108 aaPredicted RBP6.83□□□□□ -1.32
LITAF-216ENST00000574848 PLA2G1BP04054 148 aaKnown RBP6.83□□□□□ -1.32
LITAF-216ENST00000574848 ATXN8Q156A1 80 aa6.83□□□□□ -1.32
LITAF-216ENST00000574848 C2orf82Q6UX34 121 aa6.83□□□□□ -1.32
LITAF-216ENST00000574848 SOSTDC1Q6X4U4 206 aa6.83□□□□□ -1.32
LITAF-216ENST00000574848 EIF4EBP3O60516 100 aaPredicted RBP6.82□□□□□ -1.32
LITAF-216ENST00000574848 NDUFC2O95298 119 aa6.82□□□□□ -1.32
LITAF-216ENST00000574848 KRTAP10-4P60372 401 aaPredicted RBP6.82□□□□□ -1.32
LITAF-216ENST00000574848 CNBPP62633 177 aaKnown RBP6.82□□□□□ -1.32
LITAF-216ENST00000574848 C9orf163Q8N9P6 203 aa6.82□□□□□ -1.32
LITAF-216ENST00000574848 CIRBP-AS1Q8TBR5 109 aa6.82□□□□□ -1.32
LITAF-216ENST00000574848 C2orf48Q96LS8 159 aa6.82□□□□□ -1.32
LITAF-216ENST00000574848 FLG2Q5D862 2391 aaPredicted RBP6.81□□□□□ -1.32
LITAF-216ENST00000574848 H3BMG7 143 aa6.81□□□□□ -1.32
LITAF-216ENST00000574848 CAMK2N2Q96S95 79 aa6.81□□□□□ -1.32
LITAF-216ENST00000574848 KRTAP3-3Q9BYR6 98 aa6.81□□□□□ -1.32
LITAF-216ENST00000574848 KRTAP3-2Q9BYR7 98 aa6.81□□□□□ -1.32
LITAF-216ENST00000574848 TRIAP1O43715 76 aa6.8□□□□□ -1.32
LITAF-216ENST00000574848 TCL1BO95988 128 aa6.79□□□□□ -1.32
LITAF-216ENST00000574848 K7ERU9 68 aa6.78□□□□□ -1.32
LITAF-216ENST00000574848 UNQ6190/PRO20217Q6UXQ8 127 aa6.78□□□□□ -1.32
LITAF-216ENST00000574848 SDIM1Q6ZPB5 146 aa6.78□□□□□ -1.32
LITAF-216ENST00000574848 J3QR89 54 aa6.77□□□□□ -1.33
LITAF-216ENST00000574848 M0QXV9 152 aa6.77□□□□□ -1.33
LITAF-216ENST00000574848 RPL28P46779 137 aaKnown RBP6.77□□□□□ -1.33
LITAF-216ENST00000574848 HIGD2BQ4VC39 106 aa6.77□□□□□ -1.33
LITAF-216ENST00000574848 C15orf56Q8N910 161 aa6.77□□□□□ -1.33
LITAF-216ENST00000574848 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.77□□□□□ -1.33
LITAF-216ENST00000574848 KRTAP29-1A8MX34 341 aaPredicted RBP6.76□□□□□ -1.33
LITAF-216ENST00000574848 SLPIP03973 132 aa6.76□□□□□ -1.33
LITAF-216ENST00000574848 LINC00337Q8N6G1 96 aa6.76□□□□□ -1.33
LITAF-216ENST00000574848 OR13C6PQ8NH95 151 aa6.76□□□□□ -1.33
LITAF-216ENST00000574848 PKHD1L1Q86WI1 4243 aa6.75□□□□□ -1.33
LITAF-216ENST00000574848 IGKV2-28A0A075B6P5 120 aa6.75□□□□□ -1.33
LITAF-216ENST00000574848 H0YGX0 51 aa6.75□□□□□ -1.33
LITAF-216ENST00000574848 PANO1I0J062 215 aa6.75□□□□□ -1.33
LITAF-216ENST00000574848 LST1O00453 97 aa6.75□□□□□ -1.33
LITAF-216ENST00000574848 IGKV2D-28P01615 120 aa6.75□□□□□ -1.33
LITAF-216ENST00000574848 SYCNQ0VAF6 134 aa6.75□□□□□ -1.33
LITAF-216ENST00000574848 RNF151Q2KHN1 245 aa6.75□□□□□ -1.33
LITAF-216ENST00000574848 CARD19Q96LW7 228 aa6.75□□□□□ -1.33
LITAF-216ENST00000574848 TMEM126AQ9H061 195 aa6.75□□□□□ -1.33
LITAF-216ENST00000574848 C6orf48Q9UBA6 75 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms