RNA–Protein interactions for RNA: ENST00000574428.5

ATPAF1-213, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 1 (best) BASIC

Gene ATPAF1, Length 1,760 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-213ENST00000574428 PGPEP1Q9NXJ5 209 aa15.56■□□□□ 0.08
ATPAF1-213ENST00000574428 FABP2P12104 132 aa15.54■□□□□ 0.08
ATPAF1-213ENST00000574428 IFITM1P13164 125 aa15.54■□□□□ 0.08
ATPAF1-213ENST00000574428 A0A0B4J2C4 111 aa15.53■□□□□ 0.08
ATPAF1-213ENST00000574428 TSPAN13O95857 204 aa15.53■□□□□ 0.08
ATPAF1-213ENST00000574428 LINC01620Q4KN68 170 aa15.53■□□□□ 0.08
ATPAF1-213ENST00000574428 FAT2Q9NYQ8 4349 aa15.53■□□□□ 0.08
ATPAF1-213ENST00000574428 NDUFC2-KCTD14E9PQ53 114 aa15.52■□□□□ 0.08
ATPAF1-213ENST00000574428 K7EP34 96 aa15.52■□□□□ 0.08
ATPAF1-213ENST00000574428 GAGE10A6NGK3 116 aa15.52■□□□□ 0.07
ATPAF1-213ENST00000574428 LINC00308Q8TCZ7 52 aa15.52■□□□□ 0.07
ATPAF1-213ENST00000574428 PRO1854Q9UHT4 67 aa15.52■□□□□ 0.07
ATPAF1-213ENST00000574428 RPL18AQ02543 176 aaKnown RBP15.51■□□□□ 0.07
ATPAF1-213ENST00000574428 Q6ZRP5 223 aa15.51■□□□□ 0.07
ATPAF1-213ENST00000574428 C9orf163Q8N9P6 203 aa15.51■□□□□ 0.07
ATPAF1-213ENST00000574428 SPCS1Q9Y6A9 102 aa15.51■□□□□ 0.07
ATPAF1-213ENST00000574428 GAGE2EQ4V326 116 aa15.49■□□□□ 0.07
ATPAF1-213ENST00000574428 LINC00336Q6ZUF6 198 aa15.49■□□□□ 0.07
ATPAF1-213ENST00000574428 GTF2H5Q6ZYL4 71 aa15.49■□□□□ 0.07
ATPAF1-213ENST00000574428 SND1-IT1Q9HBX3 110 aa15.49■□□□□ 0.07
ATPAF1-213ENST00000574428 GAGE2DQ9UEU5 116 aa15.49■□□□□ 0.07
ATPAF1-213ENST00000574428 TLX1NBP0CAT3 122 aa15.49■□□□□ 0.07
ATPAF1-213ENST00000574428 KRTAP10-2P60368 255 aa15.49■□□□□ 0.07
ATPAF1-213ENST00000574428 SOSTDC1Q6X4U4 206 aa15.49■□□□□ 0.07
ATPAF1-213ENST00000574428 IGLV5-52A0A0A0MRZ9 124 aa15.48■□□□□ 0.07
ATPAF1-213ENST00000574428 LOC107984640A0A0U1RRK4 108 aa15.48■□□□□ 0.07
ATPAF1-213ENST00000574428 XAGE1AQ9HD64 81 aa15.48■□□□□ 0.07
ATPAF1-213ENST00000574428 HECTD4Q9Y4D8 3996 aa15.46■□□□□ 0.07
ATPAF1-213ENST00000574428 COPS9Q8WXC6 57 aa15.46■□□□□ 0.07
ATPAF1-213ENST00000574428 GAGE2BQ13066 116 aa15.45■□□□□ 0.06
ATPAF1-213ENST00000574428 DNAH11Q96DT5 4516 aa15.44■□□□□ 0.06
ATPAF1-213ENST00000574428 PPDPFQ9H3Y8 114 aa15.43■□□□□ 0.06
ATPAF1-213ENST00000574428 A0A096LNI7 61 aa15.42■□□□□ 0.06
ATPAF1-213ENST00000574428 SDIM1Q6ZPB5 146 aa15.41■□□□□ 0.06
ATPAF1-213ENST00000574428 PKD1P98161 4303 aa15.41■□□□□ 0.06
ATPAF1-213ENST00000574428 RYR3Q15413 4870 aa15.41■□□□□ 0.06
ATPAF1-213ENST00000574428 IGKV2-24A0A0C4DH68 120 aa15.41■□□□□ 0.06
ATPAF1-213ENST00000574428 H7C2G1 150 aa15.41■□□□□ 0.06
ATPAF1-213ENST00000574428 C9orf129Q5T035 196 aaKnown RBP15.41■□□□□ 0.06
ATPAF1-213ENST00000574428 LOC107984156A0A0G2JMH3 177 aa15.39■□□□□ 0.05
ATPAF1-213ENST00000574428 ARL17AQ8IVW1 177 aa15.39■□□□□ 0.05
ATPAF1-213ENST00000574428 C16orf90A8MZG2 172 aa15.39■□□□□ 0.05
ATPAF1-213ENST00000574428 CHTF8P0CG12 524 aa15.39■□□□□ 0.05
ATPAF1-213ENST00000574428 Q8NDZ9 215 aa15.38■□□□□ 0.05
ATPAF1-213ENST00000574428 PKIGQ9Y2B9 76 aa15.37■□□□□ 0.05
ATPAF1-213ENST00000574428 Q1RN00 199 aa15.36■□□□□ 0.05
ATPAF1-213ENST00000574428 RPL13AP40429 203 aaKnown RBP15.35■□□□□ 0.05
ATPAF1-213ENST00000574428 LYRM7Q5U5X0 104 aa15.35■□□□□ 0.05
ATPAF1-213ENST00000574428 A0A1B0GVY2 172 aa15.34■□□□□ 0.05
ATPAF1-213ENST00000574428 FAM168BA1KXE4 195 aa15.34■□□□□ 0.05
ATPAF1-213ENST00000574428 PSMB2P49721 201 aa15.34■□□□□ 0.05
ATPAF1-213ENST00000574428 PRR3P79522 188 aaKnown RBP15.34■□□□□ 0.05
ATPAF1-213ENST00000574428 H3BMG7 143 aa15.33■□□□□ 0.04
ATPAF1-213ENST00000574428 PANO1I0J062 215 aa15.33■□□□□ 0.04
ATPAF1-213ENST00000574428 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP15.31■□□□□ 0.04
ATPAF1-213ENST00000574428 SERTAD4-AS1Q5TG53 156 aa15.31■□□□□ 0.04
ATPAF1-213ENST00000574428 TRIAP1O43715 76 aa15.3■□□□□ 0.04
ATPAF1-213ENST00000574428 SCGB1C2P0DMR2 95 aa15.3■□□□□ 0.04
ATPAF1-213ENST00000574428 TCL1BO95988 128 aa15.29■□□□□ 0.04
ATPAF1-213ENST00000574428 VPREB1P12018 145 aa15.29■□□□□ 0.04
ATPAF1-213ENST00000574428 IGKV2-28A0A075B6P5 120 aa15.29■□□□□ 0.04
ATPAF1-213ENST00000574428 NCR3O14931 201 aa15.29■□□□□ 0.04
ATPAF1-213ENST00000574428 NDUFC2O95298 119 aa15.29■□□□□ 0.04
ATPAF1-213ENST00000574428 IGKV2D-28P01615 120 aa15.29■□□□□ 0.04
ATPAF1-213ENST00000574428 FAM19A5Q7Z5A7 132 aaPredicted RBP15.29■□□□□ 0.04
ATPAF1-213ENST00000574428 DNAH5Q8TE73 4624 aa15.28■□□□□ 0.04
ATPAF1-213ENST00000574428 SPACA4Q8TDM5 124 aa15.28■□□□□ 0.04
ATPAF1-213ENST00000574428 LINC00474Q9P2X8 69 aa15.28■□□□□ 0.04
ATPAF1-213ENST00000574428 KRTAP7-1Q8IUC3 87 aa15.27■□□□□ 0.04
ATPAF1-213ENST00000574428 TRBV20-1A0A075B6N2 111 aa15.26■□□□□ 0.03
ATPAF1-213ENST00000574428 KRTAP10-1P60331 282 aa15.26■□□□□ 0.03
ATPAF1-213ENST00000574428 A0A1W2PNN7 141 aa15.26■□□□□ 0.03
ATPAF1-213ENST00000574428 PLA2G2DQ9UNK4 145 aa15.26■□□□□ 0.03
ATPAF1-213ENST00000574428 DPH3Q96FX2 82 aa15.25■□□□□ 0.03
ATPAF1-213ENST00000574428 LINC00337Q8N6G1 96 aa15.24■□□□□ 0.03
ATPAF1-213ENST00000574428 TRAV13-2A0A0B4J235 113 aa15.23■□□□□ 0.03
ATPAF1-213ENST00000574428 MTURNQ8N3F0 131 aa15.23■□□□□ 0.03
ATPAF1-213ENST00000574428 NKAPP1Q8N9T2 125 aa15.23■□□□□ 0.03
ATPAF1-213ENST00000574428 PRO0461Q9UI25 63 aa15.23■□□□□ 0.03
ATPAF1-213ENST00000574428 F8W1H4 67 aa15.21■□□□□ 0.02
ATPAF1-213ENST00000574428 FAM30AQ9NZY2 134 aa15.21■□□□□ 0.02
ATPAF1-213ENST00000574428 PKHD1P08F94 4074 aa15.21■□□□□ 0.02
ATPAF1-213ENST00000574428 IGLV5-37A0A075B6J1 123 aa15.2■□□□□ 0.02
ATPAF1-213ENST00000574428 COX6CP09669 75 aa15.19■□□□□ 0.02
ATPAF1-213ENST00000574428 C22orf24Q9Y442 160 aa15.19■□□□□ 0.02
ATPAF1-213ENST00000574428 A0A087WYN8 130 aa15.19■□□□□ 0.02
ATPAF1-213ENST00000574428 TRBV10-2A0A0K0K1G8 114 aa15.19■□□□□ 0.02
ATPAF1-213ENST00000574428 OR13C6PQ8NH95 151 aa15.19■□□□□ 0.02
ATPAF1-213ENST00000574428 M0QXV9 152 aa15.18■□□□□ 0.02
ATPAF1-213ENST00000574428 M0R378 163 aa15.18■□□□□ 0.02
ATPAF1-213ENST00000574428 C7orf33Q8WU49 177 aa15.17■□□□□ 0.02
ATPAF1-213ENST00000574428 ATXN8Q156A1 80 aa15.16■□□□□ 0.02
ATPAF1-213ENST00000574428 S100A7L2Q5SY68 101 aa15.16■□□□□ 0.02
ATPAF1-213ENST00000574428 Q6ZSA8 131 aa15.16■□□□□ 0.02
ATPAF1-213ENST00000574428 MRPL55Q7Z7F7 128 aaKnown RBP15.15■□□□□ 0.02
ATPAF1-213ENST00000574428 CLEC2BQ92478 149 aa15.15■□□□□ 0.02
ATPAF1-213ENST00000574428 TRBV10-3A0A0K0K1G6 114 aa15.13■□□□□ 0.01
ATPAF1-213ENST00000574428 SMCPP49901 116 aaPredicted RBP15.13■□□□□ 0.01
ATPAF1-213ENST00000574428 PHF5AQ7RTV0 110 aaKnown RBP15.13■□□□□ 0.01
ATPAF1-213ENST00000574428 LINC00167Q96N53 147 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms