RNA–Protein interactions for RNA: ENST00000574304.5

CDC27-216, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 514 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-216ENST00000574304 MRPL34Q9BQ48 92 aaKnown RBP-1.33□□□□□ -2.62
CDC27-216ENST00000574304 RERGLQ9H628 205 aa-1.33□□□□□ -2.62
CDC27-216ENST00000574304 CDC42SE2Q9NRR3 84 aa-1.33□□□□□ -2.62
CDC27-216ENST00000574304 C1orf167Q5SNV9 1468 aa-1.33□□□□□ -2.62
CDC27-216ENST00000574304 ARHGEF5Q12774 1597 aa-1.34□□□□□ -2.62
CDC27-216ENST00000574304 SPTBN5Q9NRC6 3674 aaKnown RBP-1.34□□□□□ -2.62
CDC27-216ENST00000574304 CHKB-CPT1BH3BT56 60 aa-1.34□□□□□ -2.62
CDC27-216ENST00000574304 FAM223AQ8IWN6 122 aa-1.34□□□□□ -2.62
CDC27-216ENST00000574304 MYOZ3Q8TDC0 251 aa-1.34□□□□□ -2.62
CDC27-216ENST00000574304 PPP3R2Q96LZ3 170 aa-1.34□□□□□ -2.62
CDC27-216ENST00000574304 UQCR10Q9UDW1 63 aa-1.34□□□□□ -2.62
CDC27-216ENST00000574304 NCOA3Q9Y6Q9 1424 aa-1.34□□□□□ -2.62
CDC27-216ENST00000574304 MARF1Q9Y4F3 1742 aaKnown RBP-1.35□□□□□ -2.62
CDC27-216ENST00000574304 TET3O43151 1660 aa-1.35□□□□□ -2.63
CDC27-216ENST00000574304 SEC11AP67812 179 aa-1.35□□□□□ -2.63
CDC27-216ENST00000574304 WHAMMP3Q1A5X7 153 aa-1.35□□□□□ -2.63
CDC27-216ENST00000574304 KRTAP8-1Q8IUC2 63 aa-1.35□□□□□ -2.63
CDC27-216ENST00000574304 PRO1933Q9H354 126 aa-1.35□□□□□ -2.63
CDC27-216ENST00000574304 CDKN2A-AS1Q9UH64 79 aa-1.35□□□□□ -2.63
CDC27-216ENST00000574304 S4R3F8 94 aa-1.35□□□□□ -2.63
CDC27-216ENST00000574304 PLEKHH2Q8IVE3 1493 aa-1.36□□□□□ -2.63
CDC27-216ENST00000574304 NLRP1Q9C000 1473 aa-1.36□□□□□ -2.63
CDC27-216ENST00000574304 LOC400499M0QZD8 3231 aa-1.36□□□□□ -2.63
CDC27-216ENST00000574304 HIGD1BQ9P298 99 aa-1.36□□□□□ -2.63
CDC27-216ENST00000574304 LINC00474Q9P2X8 69 aa-1.36□□□□□ -2.63
CDC27-216ENST00000574304 ARL2-SNX15V9GYD0 113 aa-1.36□□□□□ -2.63
CDC27-216ENST00000574304 DCHS1Q96JQ0 3298 aa-1.36□□□□□ -2.63
CDC27-216ENST00000574304 CCDC141Q6ZP82 1450 aa-1.37□□□□□ -2.63
CDC27-216ENST00000574304 DMDP11532 3685 aa-1.37□□□□□ -2.63
CDC27-216ENST00000574304 A0A0G2JMZ2 1700 aa-1.37□□□□□ -2.63
CDC27-216ENST00000574304 DNAH10Q8IVF4 4471 aa-1.37□□□□□ -2.63
CDC27-216ENST00000574304 TRAV30A0A087WSZ9 112 aa-1.37□□□□□ -2.63
CDC27-216ENST00000574304 A0A1B0GU69 56 aa-1.37□□□□□ -2.63
CDC27-216ENST00000574304 FAM25AB3EWG3 89 aa-1.37□□□□□ -2.63
CDC27-216ENST00000574304 FAM25CB3EWG5 89 aa-1.37□□□□□ -2.63
CDC27-216ENST00000574304 FAM25GB3EWG6 89 aa-1.37□□□□□ -2.63
CDC27-216ENST00000574304 SNRNP25Q9BV90 132 aaKnown RBP-1.37□□□□□ -2.63
CDC27-216ENST00000574304 SPANXDQ9BXN6 97 aa-1.37□□□□□ -2.63
CDC27-216ENST00000574304 MAP3K1Q13233 1512 aa-1.37□□□□□ -2.63
CDC27-216ENST00000574304 SHROOM2Q13796 1616 aa-1.37□□□□□ -2.63
CDC27-216ENST00000574304 XRN1Q8IZH2 1706 aaKnown RBP-1.37□□□□□ -2.63
CDC27-216ENST00000574304 EP400Q96L91 3159 aa-1.38□□□□□ -2.63
CDC27-216ENST00000574304 SMG6Q86US8 1419 aaKnown RBP-1.38□□□□□ -2.63
CDC27-216ENST00000574304 K7EP34 96 aa-1.38□□□□□ -2.63
CDC27-216ENST00000574304 CCL22O00626 93 aa-1.38□□□□□ -2.63
CDC27-216ENST00000574304 MT1FP04733 61 aa-1.38□□□□□ -2.63
CDC27-216ENST00000574304 MEIG1Q5JSS6 88 aa-1.38□□□□□ -2.63
CDC27-216ENST00000574304 ADGRL2O95490 1459 aa-1.38□□□□□ -2.63
CDC27-216ENST00000574304 EHBP1L1Q8N3D4 1523 aa-1.39□□□□□ -2.63
CDC27-216ENST00000574304 CATR1Q13166 79 aa-1.39□□□□□ -2.63
CDC27-216ENST00000574304 DEFB110Q30KQ9 67 aa-1.39□□□□□ -2.63
CDC27-216ENST00000574304 COMMD6Q7Z4G1 85 aa-1.39□□□□□ -2.63
CDC27-216ENST00000574304 SCN7AQ01118 1682 aa-1.39□□□□□ -2.63
CDC27-216ENST00000574304 SPEGQ15772 3267 aa-1.4□□□□□ -2.63
CDC27-216ENST00000574304 LOC105371267A0A1B0GV96 52 aa-1.4□□□□□ -2.63
CDC27-216ENST00000574304 A0A1B0GWA3 101 aa-1.4□□□□□ -2.63
CDC27-216ENST00000574304 FAM223BA6NKX1 122 aa-1.4□□□□□ -2.63
CDC27-216ENST00000574304 C6orf201Q7Z4U5 140 aa-1.4□□□□□ -2.63
CDC27-216ENST00000574304 C5orf38Q86SI9 138 aa-1.4□□□□□ -2.63
CDC27-216ENST00000574304 C8orf59Q8N0T1 100 aaPredicted RBP-1.4□□□□□ -2.63
CDC27-216ENST00000574304 MYH7P12883 1935 aa-1.4□□□□□ -2.63
CDC27-216ENST00000574304 EDC4Q6P2E9 1401 aaKnown RBP-1.4□□□□□ -2.63
CDC27-216ENST00000574304 SMR3BP02814 79 aaPredicted RBP-1.41□□□□□ -2.64
CDC27-216ENST00000574304 Q56UQ5 140 aa-1.41□□□□□ -2.64
CDC27-216ENST00000574304 SFTA2Q6UW10 78 aa-1.41□□□□□ -2.64
CDC27-216ENST00000574304 ARL11Q969Q4 196 aa-1.41□□□□□ -2.64
CDC27-216ENST00000574304 CEP350Q5VT06 3117 aa-1.41□□□□□ -2.64
CDC27-216ENST00000574304 CLIP1P30622 1438 aa-1.41□□□□□ -2.64
CDC27-216ENST00000574304 QRICH2Q9H0J4 1663 aa-1.42□□□□□ -2.64
CDC27-216ENST00000574304 MBD5Q9P267 1494 aa-1.42□□□□□ -2.64
CDC27-216ENST00000574304 A0A087WVE0 104 aa-1.42□□□□□ -2.64
CDC27-216ENST00000574304 GNG7O60262 68 aa-1.42□□□□□ -2.64
CDC27-216ENST00000574304 APOC2P02655 101 aa-1.42□□□□□ -2.64
CDC27-216ENST00000574304 SNCAP37840 140 aa-1.42□□□□□ -2.64
CDC27-216ENST00000574304 C9orf153Q5TBE3 101 aa-1.42□□□□□ -2.64
CDC27-216ENST00000574304 MT1LQ93083 61 aa-1.42□□□□□ -2.64
CDC27-216ENST00000574304 MT1EP04732 61 aa-1.43□□□□□ -2.64
CDC27-216ENST00000574304 FGF7P21781 194 aa-1.43□□□□□ -2.64
CDC27-216ENST00000574304 TCHHQ07283 1943 aa-1.43□□□□□ -2.64
CDC27-216ENST00000574304 PHLPP1O60346 1717 aa-1.43□□□□□ -2.64
CDC27-216ENST00000574304 SPTY2D1-AS1A0A0U1RR47 76 aa-1.44□□□□□ -2.64
CDC27-216ENST00000574304 SAA2P0DJI9 122 aaPredicted RBP-1.44□□□□□ -2.64
CDC27-216ENST00000574304 HSD52Q0P140 79 aa-1.44□□□□□ -2.64
CDC27-216ENST00000574304 LINC00470Q9BZP3 86 aa-1.44□□□□□ -2.64
CDC27-216ENST00000574304 MANBALQ9NQG1 85 aa-1.44□□□□□ -2.64
CDC27-216ENST00000574304 PAIP2BQ9ULR5 123 aaKnown RBP-1.44□□□□□ -2.64
CDC27-216ENST00000574304 NAIPQ13075 1403 aa-1.44□□□□□ -2.64
CDC27-216ENST00000574304 NUP188Q5SRE5 1749 aa-1.44□□□□□ -2.64
CDC27-216ENST00000574304 WDFY4Q6ZS81 3184 aa-1.44□□□□□ -2.64
CDC27-216ENST00000574304 ROBO1Q9Y6N7 1651 aa-1.45□□□□□ -2.64
CDC27-216ENST00000574304 A0A0G2JND7 137 aa-1.45□□□□□ -2.64
CDC27-216ENST00000574304 NDUFA3O95167 84 aa-1.45□□□□□ -2.64
CDC27-216ENST00000574304 GNG11P61952 73 aa-1.45□□□□□ -2.64
CDC27-216ENST00000574304 SELENOWP63302 87 aa-1.45□□□□□ -2.64
CDC27-216ENST00000574304 DEFB107AQ8IZN7 70 aa-1.45□□□□□ -2.64
CDC27-216ENST00000574304 TOP2BQ02880 1626 aa-1.45□□□□□ -2.64
CDC27-216ENST00000574304 LRRC37AA6NMS7 1700 aa-1.46□□□□□ -2.64
CDC27-216ENST00000574304 TRBV7-7A0A0K0K1E9 115 aa-1.46□□□□□ -2.64
CDC27-216ENST00000574304 ARMS2P0C7Q2 107 aa-1.46□□□□□ -2.64
CDC27-216ENST00000574304 TRAPPC2P0DI81 140 aa-1.46□□□□□ -2.64
Retrieved 100 of 20,778 RNA–protein pairs in 1053.4 ms