RNA–Protein interactions for RNA: ENST00000573827.1

SMG6-214, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-214ENST00000573827 KRTAP13-2Q52LG2 175 aa10.24□□□□□ -0.77
SMG6-214ENST00000573827 FAM19A2Q8N3H0 131 aa10.24□□□□□ -0.77
SMG6-214ENST00000573827 TMEM126AQ9H061 195 aa10.23□□□□□ -0.77
SMG6-214ENST00000573827 CRYGAP11844 174 aa10.22□□□□□ -0.77
SMG6-214ENST00000573827 TRGC2P03986 189 aa10.21□□□□□ -0.77
SMG6-214ENST00000573827 UBE2AP49459 152 aa10.21□□□□□ -0.77
SMG6-214ENST00000573827 PRLHP81277 87 aa10.21□□□□□ -0.77
SMG6-214ENST00000573827 RPL24P83731 157 aaKnown RBP10.21□□□□□ -0.77
SMG6-214ENST00000573827 HSBP1O75506 76 aa10.19□□□□□ -0.78
SMG6-214ENST00000573827 FAM229BQ4G0N7 80 aa10.19□□□□□ -0.78
SMG6-214ENST00000573827 SMIM13P0DJ93 91 aa10.18□□□□□ -0.78
SMG6-214ENST00000573827 LINC00158P58513 81 aa10.18□□□□□ -0.78
SMG6-214ENST00000573827 A0A0U1RRA0 63 aa10.17□□□□□ -0.78
SMG6-214ENST00000573827 SERF1AO75920 110 aa10.17□□□□□ -0.78
SMG6-214ENST00000573827 TSPEAR-AS2P59090 65 aa10.17□□□□□ -0.78
SMG6-214ENST00000573827 SLC7A5P1Q8MH63 180 aa10.17□□□□□ -0.78
SMG6-214ENST00000573827 TYMSOSQ8TAI1 123 aa10.17□□□□□ -0.78
SMG6-214ENST00000573827 COLCA2A8K830 154 aa10.16□□□□□ -0.78
SMG6-214ENST00000573827 FAM19A1Q7Z5A9 133 aa10.16□□□□□ -0.78
SMG6-214ENST00000573827 PLEKHB2Q96CS7 222 aa10.16□□□□□ -0.78
SMG6-214ENST00000573827 MUC17Q685J3 4493 aa10.16□□□□□ -0.78
SMG6-214ENST00000573827 TSPAN13O95857 204 aa10.15□□□□□ -0.78
SMG6-214ENST00000573827 PRR4Q16378 134 aa10.15□□□□□ -0.78
SMG6-214ENST00000573827 MIR7-3HGQ8N6C7 128 aa10.14□□□□□ -0.79
SMG6-214ENST00000573827 NDUFA12Q9UI09 145 aa10.14□□□□□ -0.79
SMG6-214ENST00000573827 LEPROTL1O95214 131 aa10.13□□□□□ -0.79
SMG6-214ENST00000573827 HERV-K104P63124 156 aa10.13□□□□□ -0.79
SMG6-214ENST00000573827 KRTAP4-16G5E9R7 235 aaPredicted RBP10.12□□□□□ -0.79
SMG6-214ENST00000573827 SPRR1AP35321 89 aa10.12□□□□□ -0.79
SMG6-214ENST00000573827 BOD1L2Q8IYS8 172 aa10.11□□□□□ -0.79
SMG6-214ENST00000573827 LOC107984156A0A0G2JMH3 177 aa10.1□□□□□ -0.79
SMG6-214ENST00000573827 H0Y8G0 127 aa10.1□□□□□ -0.79
SMG6-214ENST00000573827 MEIG1Q5JSS6 88 aa10.1□□□□□ -0.79
SMG6-214ENST00000573827 ARL17AQ8IVW1 177 aa10.1□□□□□ -0.79
SMG6-214ENST00000573827 KCNQ1DNQ9H478 68 aa10.1□□□□□ -0.79
SMG6-214ENST00000573827 MYMXA0A1B0GTQ4 84 aa10.09□□□□□ -0.79
SMG6-214ENST00000573827 LEPROTO15243 131 aa10.09□□□□□ -0.79
SMG6-214ENST00000573827 IGKV2D-26A0A0A0MRZ7 120 aa10.08□□□□□ -0.8
SMG6-214ENST00000573827 PRYO14603 147 aa10.08□□□□□ -0.8
SMG6-214ENST00000573827 PLNP26678 52 aa10.08□□□□□ -0.8
SMG6-214ENST00000573827 LINC00304Q8N9R0 145 aa10.08□□□□□ -0.8
SMG6-214ENST00000573827 SPRR4Q96PI1 79 aa10.08□□□□□ -0.8
SMG6-214ENST00000573827 FAT4Q6V0I7 4981 aa10.07□□□□□ -0.8
SMG6-214ENST00000573827 NCR3O14931 201 aa10.07□□□□□ -0.8
SMG6-214ENST00000573827 FABP4P15090 132 aa10.07□□□□□ -0.8
SMG6-214ENST00000573827 C3orf22Q8N5N4 141 aa10.07□□□□□ -0.8
SMG6-214ENST00000573827 LINC00337Q8N6G1 96 aa10.07□□□□□ -0.8
SMG6-214ENST00000573827 PMCHL2Q9BQD1 86 aa10.07□□□□□ -0.8
SMG6-214ENST00000573827 HIGD2AQ9BW72 106 aa10.07□□□□□ -0.8
SMG6-214ENST00000573827 HSPB8Q9UJY1 196 aa10.07□□□□□ -0.8
SMG6-214ENST00000573827 TRBV10-3A0A0K0K1G6 114 aa10.06□□□□□ -0.8
SMG6-214ENST00000573827 LINC00587B1AMM8 73 aa10.06□□□□□ -0.8
SMG6-214ENST00000573827 DPM2O94777 84 aa10.06□□□□□ -0.8
SMG6-214ENST00000573827 DAND5Q8N907 189 aa10.06□□□□□ -0.8
SMG6-214ENST00000573827 J3QQQ9 107 aa10.05□□□□□ -0.8
SMG6-214ENST00000573827 ATP6V1G1O75348 118 aa10.05□□□□□ -0.8
SMG6-214ENST00000573827 IGKCP01834 107 aa10.03□□□□□ -0.8
SMG6-214ENST00000573827 CTAG1AP78358 180 aa10.03□□□□□ -0.8
SMG6-214ENST00000573827 SMCR5Q8TEV8 140 aa10.03□□□□□ -0.8
SMG6-214ENST00000573827 RETNLBQ9BQ08 111 aa10.03□□□□□ -0.8
SMG6-214ENST00000573827 MAP1LC3CQ9BXW4 147 aa10.03□□□□□ -0.8
SMG6-214ENST00000573827 EIF4EBP3O60516 100 aaPredicted RBP10.02□□□□□ -0.81
SMG6-214ENST00000573827 TRBV10-2A0A0K0K1G8 114 aa10.01□□□□□ -0.81
SMG6-214ENST00000573827 NMUP48645 174 aa10.01□□□□□ -0.81
SMG6-214ENST00000573827 HIST1H2BKO60814 126 aa10□□□□□ -0.81
SMG6-214ENST00000573827 HIST1H2BJP06899 126 aa10□□□□□ -0.81
SMG6-214ENST00000573827 HIST1H2BOP23527 126 aa10□□□□□ -0.81
SMG6-214ENST00000573827 HIST1H2BBP33778 126 aa10□□□□□ -0.81
SMG6-214ENST00000573827 HIST1H2BDP58876 126 aa10□□□□□ -0.81
SMG6-214ENST00000573827 HIST1H2BCP62807 126 aa10□□□□□ -0.81
SMG6-214ENST00000573827 HIST2H2BEQ16778 126 aa10□□□□□ -0.81
SMG6-214ENST00000573827 HIST2H2BFQ5QNW6 126 aaPredicted RBP10□□□□□ -0.81
SMG6-214ENST00000573827 SOSTDC1Q6X4U4 206 aa10□□□□□ -0.81
SMG6-214ENST00000573827 HIST1H2BHQ93079 126 aa10□□□□□ -0.81
SMG6-214ENST00000573827 HIST1H2BNQ99877 126 aa10□□□□□ -0.81
SMG6-214ENST00000573827 HIST1H2BMQ99879 126 aa10□□□□□ -0.81
SMG6-214ENST00000573827 B5MCH6 92 aa9.99□□□□□ -0.81
SMG6-214ENST00000573827 HERVK_113P61574 105 aa9.99□□□□□ -0.81
SMG6-214ENST00000573827 LINC00483Q53H64 154 aa9.99□□□□□ -0.81
SMG6-214ENST00000573827 ADAMTSL4-AS1Q5T5F5 129 aa9.99□□□□□ -0.81
SMG6-214ENST00000573827 IGLV6-57P01721 117 aa9.98□□□□□ -0.81
SMG6-214ENST00000573827 A0A0J9YXY3 114 aa9.97□□□□□ -0.81
SMG6-214ENST00000573827 ETDCA0A1B0GVM5 59 aa9.97□□□□□ -0.81
SMG6-214ENST00000573827 E9PLD3 99 aa9.97□□□□□ -0.81
SMG6-214ENST00000573827 ERC2-IT1O76042 136 aa9.97□□□□□ -0.81
SMG6-214ENST00000573827 LGALS3P17931 250 aaKnown RBP9.97□□□□□ -0.81
SMG6-214ENST00000573827 ZNF706Q9Y5V0 76 aaPredicted RBP9.97□□□□□ -0.81
SMG6-214ENST00000573827 SYS1-DBNDD2H3BUS1 97 aa9.96□□□□□ -0.82
SMG6-214ENST00000573827 NDUFC2O95298 119 aa9.96□□□□□ -0.82
SMG6-214ENST00000573827 DDTP30046 118 aa9.96□□□□□ -0.82
SMG6-214ENST00000573827 Q9BRP9 147 aa9.96□□□□□ -0.82
SMG6-214ENST00000573827 SPANXB1Q9NS25 103 aaPredicted RBP9.96□□□□□ -0.82
SMG6-214ENST00000573827 LITAFQ99732 161 aa9.95□□□□□ -0.82
SMG6-214ENST00000573827 TPRXLQ17RH7 258 aa9.94□□□□□ -0.82
SMG6-214ENST00000573827 LINC01545Q5VT33 79 aa9.94□□□□□ -0.82
SMG6-214ENST00000573827 PPDPFQ9H3Y8 114 aa9.94□□□□□ -0.82
SMG6-214ENST00000573827 SPAG11AQ6PDA7 123 aa9.93□□□□□ -0.82
SMG6-214ENST00000573827 IGLV7-46A0A075B6I9 117 aa9.92□□□□□ -0.82
SMG6-214ENST00000573827 Q6ZRX8 168 aa9.92□□□□□ -0.82
SMG6-214ENST00000573827 Q8NBF4 154 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 106.7 ms