RNA–Protein interactions for RNA: ENST00000573795.5

SNF8-216, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-216ENST00000573795 COX19Q49B96 90 aa12.54□□□□□ -0.4
SNF8-216ENST00000573795 HIGD2AQ9BW72 106 aa12.54□□□□□ -0.4
SNF8-216ENST00000573795 SPRR4Q96PI1 79 aa12.53□□□□□ -0.4
SNF8-216ENST00000573795 SEC11CQ9BY50 192 aa12.53□□□□□ -0.4
SNF8-216ENST00000573795 PMCHL1Q16048 86 aa12.51□□□□□ -0.41
SNF8-216ENST00000573795 HBDP02042 147 aa12.5□□□□□ -0.41
SNF8-216ENST00000573795 C18orf32Q8TCD1 76 aa12.5□□□□□ -0.41
SNF8-216ENST00000573795 SPAG11AQ6PDA7 123 aa12.49□□□□□ -0.41
SNF8-216ENST00000573795 KRTAP9-6A0A140TA67 174 aa12.48□□□□□ -0.41
SNF8-216ENST00000573795 LINC00614P0C842 121 aa12.48□□□□□ -0.41
SNF8-216ENST00000573795 TMEM170BQ5T4T1 132 aa12.48□□□□□ -0.41
SNF8-216ENST00000573795 SFTA2Q6UW10 78 aa12.48□□□□□ -0.41
SNF8-216ENST00000573795 IFITM2Q01629 132 aa12.47□□□□□ -0.41
SNF8-216ENST00000573795 BAGE3Q86Y29 109 aa12.47□□□□□ -0.41
SNF8-216ENST00000573795 FP248Q71RG6 208 aaPredicted RBP12.46□□□□□ -0.41
SNF8-216ENST00000573795 LINC00158P58513 81 aa12.45□□□□□ -0.42
SNF8-216ENST00000573795 A0A0U1RRA0 63 aa12.44□□□□□ -0.42
SNF8-216ENST00000573795 KRTAP13-3Q3SY46 172 aa12.44□□□□□ -0.42
SNF8-216ENST00000573795 C10orf91Q5T1B1 145 aa12.44□□□□□ -0.42
SNF8-216ENST00000573795 DAND5Q8N907 189 aa12.44□□□□□ -0.42
SNF8-216ENST00000573795 Q8NBF4 154 aa12.43□□□□□ -0.42
SNF8-216ENST00000573795 SPRR1AP35321 89 aa12.42□□□□□ -0.42
SNF8-216ENST00000573795 RPS10P5Q9NQ39 176 aa12.42□□□□□ -0.42
SNF8-216ENST00000573795 TMEM223A0PJW6 202 aa12.41□□□□□ -0.42
SNF8-216ENST00000573795 KRTAP4-16G5E9R7 235 aaPredicted RBP12.41□□□□□ -0.42
SNF8-216ENST00000573795 PRYO14603 147 aa12.41□□□□□ -0.42
SNF8-216ENST00000573795 RHEBQ15382 184 aa12.41□□□□□ -0.42
SNF8-216ENST00000573795 CHTOPQ9Y3Y2 248 aaKnown RBP12.41□□□□□ -0.42
SNF8-216ENST00000573795 TRAPPC1Q9Y5R8 145 aa12.41□□□□□ -0.42
SNF8-216ENST00000573795 ZNF706Q9Y5V0 76 aaPredicted RBP12.41□□□□□ -0.42
SNF8-216ENST00000573795 SMIM13P0DJ93 91 aa12.39□□□□□ -0.43
SNF8-216ENST00000573795 LINC00337Q8N6G1 96 aa12.39□□□□□ -0.43
SNF8-216ENST00000573795 KRTAP4-1Q9BYQ7 146 aa12.39□□□□□ -0.43
SNF8-216ENST00000573795 NCR3O14931 201 aa12.38□□□□□ -0.43
SNF8-216ENST00000573795 ASB16-AS1Q495Z4 193 aa12.38□□□□□ -0.43
SNF8-216ENST00000573795 C4orf48Q5BLP8 95 aa12.38□□□□□ -0.43
SNF8-216ENST00000573795 COMMD7Q86VX2 200 aa12.38□□□□□ -0.43
SNF8-216ENST00000573795 SMCR5Q8TEV8 140 aa12.38□□□□□ -0.43
SNF8-216ENST00000573795 KCNQ1DNQ9H478 68 aa12.38□□□□□ -0.43
SNF8-216ENST00000573795 BOD1L2Q8IYS8 172 aa12.37□□□□□ -0.43
SNF8-216ENST00000573795 LINC00483Q53H64 154 aa12.36□□□□□ -0.43
SNF8-216ENST00000573795 MIR7-3HGQ8N6C7 128 aa12.35□□□□□ -0.43
SNF8-216ENST00000573795 TRAV12-1A0A0B4J245 112 aa12.34□□□□□ -0.43
SNF8-216ENST00000573795 SPINK1P00995 79 aa12.33□□□□□ -0.44
SNF8-216ENST00000573795 TRBV10-3A0A0K0K1G6 114 aa12.32□□□□□ -0.44
SNF8-216ENST00000573795 MEIG1Q5JSS6 88 aa12.32□□□□□ -0.44
SNF8-216ENST00000573795 ETDCA0A1B0GVM5 59 aa12.31□□□□□ -0.44
SNF8-216ENST00000573795 IFI27L1Q96BM0 104 aa12.3□□□□□ -0.44
SNF8-216ENST00000573795 ATP6V1G1O75348 118 aa12.29□□□□□ -0.44
SNF8-216ENST00000573795 ERC2-IT1O76042 136 aa12.29□□□□□ -0.44
SNF8-216ENST00000573795 B5MCH6 92 aa12.28□□□□□ -0.44
SNF8-216ENST00000573795 HERV-K104P63124 156 aa12.28□□□□□ -0.44
SNF8-216ENST00000573795 GAGE2AQ6NT46 116 aa12.28□□□□□ -0.44
SNF8-216ENST00000573795 MOBPQ13875 183 aa12.27□□□□□ -0.45
SNF8-216ENST00000573795 Q8N377 158 aa12.27□□□□□ -0.45
SNF8-216ENST00000573795 CHCHD1Q96BP2 118 aaKnown RBP12.26□□□□□ -0.45
SNF8-216ENST00000573795 NDUFA12Q9UI09 145 aa12.26□□□□□ -0.45
SNF8-216ENST00000573795 Q9BRP9 147 aa12.25□□□□□ -0.45
SNF8-216ENST00000573795 IGLV9-49A0A0B4J1Y8 123 aa12.24□□□□□ -0.45
SNF8-216ENST00000573795 TSPEAR-AS2P59090 65 aa12.24□□□□□ -0.45
SNF8-216ENST00000573795 SEC61BP60468 96 aaKnown RBP12.24□□□□□ -0.45
SNF8-216ENST00000573795 RPS29P62273 56 aaKnown RBP12.24□□□□□ -0.45
SNF8-216ENST00000573795 LINC01547P58512 204 aaPredicted RBP12.23□□□□□ -0.45
SNF8-216ENST00000573795 YPEL4Q96NS1 127 aa12.23□□□□□ -0.45
SNF8-216ENST00000573795 LOC107984156A0A0G2JMH3 177 aa12.22□□□□□ -0.45
SNF8-216ENST00000573795 SSBP3-AS1Q7Z2R9 100 aa12.22□□□□□ -0.45
SNF8-216ENST00000573795 ARL17AQ8IVW1 177 aa12.22□□□□□ -0.45
SNF8-216ENST00000573795 MYMXA0A1B0GTQ4 84 aa12.21□□□□□ -0.45
SNF8-216ENST00000573795 LINC00587B1AMM8 73 aa12.21□□□□□ -0.45
SNF8-216ENST00000573795 DDTP30046 118 aa12.2□□□□□ -0.46
SNF8-216ENST00000573795 LCE2DQ5TA82 110 aaPredicted RBP12.2□□□□□ -0.46
SNF8-216ENST00000573795 TRBV10-2A0A0K0K1G8 114 aa12.19□□□□□ -0.46
SNF8-216ENST00000573795 APOC3P02656 99 aa12.19□□□□□ -0.46
SNF8-216ENST00000573795 XP32Q5T750 250 aa12.19□□□□□ -0.46
SNF8-216ENST00000573795 Q6ZRX8 168 aa12.19□□□□□ -0.46
SNF8-216ENST00000573795 FAM19A2Q8N3H0 131 aa12.19□□□□□ -0.46
SNF8-216ENST00000573795 MAP1LC3CQ9BXW4 147 aa12.19□□□□□ -0.46
SNF8-216ENST00000573795 S100A12P80511 92 aa12.17□□□□□ -0.46
SNF8-216ENST00000573795 SLC25A20O43772 301 aa12.16□□□□□ -0.46
SNF8-216ENST00000573795 LEPROTO15243 131 aa12.15□□□□□ -0.46
SNF8-216ENST00000573795 FSIP2Q5CZC0 6907 aa12.15□□□□□ -0.47
SNF8-216ENST00000573795 H0Y8G0 127 aa12.14□□□□□ -0.47
SNF8-216ENST00000573795 SNAPINO95295 136 aa12.14□□□□□ -0.47
SNF8-216ENST00000573795 IGLV6-57P01721 117 aa12.14□□□□□ -0.47
SNF8-216ENST00000573795 LCE2CQ5TA81 110 aa12.14□□□□□ -0.47
SNF8-216ENST00000573795 SPANXB1Q9NS25 103 aaPredicted RBP12.14□□□□□ -0.47
SNF8-216ENST00000573795 HSBP1O75506 76 aa12.13□□□□□ -0.47
SNF8-216ENST00000573795 SVBPQ8N300 66 aa12.13□□□□□ -0.47
SNF8-216ENST00000573795 J3QQQ9 107 aa12.1□□□□□ -0.47
SNF8-216ENST00000573795 LINC00310P59036 64 aa12.1□□□□□ -0.47
SNF8-216ENST00000573795 EIF4EBP3O60516 100 aaPredicted RBP12.09□□□□□ -0.47
SNF8-216ENST00000573795 NDUFC2O95298 119 aa12.09□□□□□ -0.47
SNF8-216ENST00000573795 KRTAP19-2Q3LHN2 52 aa12.09□□□□□ -0.47
SNF8-216ENST00000573795 C9orf153Q5TBE3 101 aa12.09□□□□□ -0.47
SNF8-216ENST00000573795 SOSTDC1Q6X4U4 206 aa12.09□□□□□ -0.47
SNF8-216ENST00000573795 ST20-AS1Q8NBB2 130 aa12.09□□□□□ -0.47
SNF8-216ENST00000573795 TRAV23DV6A0A075B6W5 121 aa12.08□□□□□ -0.48
SNF8-216ENST00000573795 NDUFA5Q16718 116 aa12.07□□□□□ -0.48
SNF8-216ENST00000573795 S100A7L2Q5SY68 101 aa12.07□□□□□ -0.48
SNF8-216ENST00000573795 LEPROTL1O95214 131 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms