RNA–Protein interactions for RNA: ENST00000573203.5

NDE1-207, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 762 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-207ENST00000573203 SFTA2Q6UW10 78 aa5.87□□□□□ -1.47
NDE1-207ENST00000573203 C9orf163Q8N9P6 203 aa5.87□□□□□ -1.47
NDE1-207ENST00000573203 NDUFA12Q9UI09 145 aa5.87□□□□□ -1.47
NDE1-207ENST00000573203 A0A087WZ39 114 aa5.86□□□□□ -1.47
NDE1-207ENST00000573203 LINC00959A0A1B0GUT2 108 aa5.86□□□□□ -1.47
NDE1-207ENST00000573203 C9orf118A6NHY6 69 aa5.86□□□□□ -1.47
NDE1-207ENST00000573203 SMIM1B2RUZ4 78 aa5.86□□□□□ -1.47
NDE1-207ENST00000573203 TMEM238C9JI98 176 aa5.86□□□□□ -1.47
NDE1-207ENST00000573203 NDUFA1O15239 70 aa5.86□□□□□ -1.47
NDE1-207ENST00000573203 PLA2G1BP04054 148 aaKnown RBP5.86□□□□□ -1.47
NDE1-207ENST00000573203 FXYD2P54710 66 aa5.86□□□□□ -1.47
NDE1-207ENST00000573203 HERV-K104P63124 156 aa5.86□□□□□ -1.47
NDE1-207ENST00000573203 CHCHD10Q8WYQ3 142 aaPredicted RBP5.86□□□□□ -1.47
NDE1-207ENST00000573203 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.85□□□□□ -1.47
NDE1-207ENST00000573203 SPINK8P0C7L1 97 aa5.85□□□□□ -1.47
NDE1-207ENST00000573203 IFITM1P13164 125 aa5.85□□□□□ -1.47
NDE1-207ENST00000573203 CNBPP62633 177 aaKnown RBP5.85□□□□□ -1.47
NDE1-207ENST00000573203 SS18Q15532 418 aa5.85□□□□□ -1.47
NDE1-207ENST00000573203 CIRBP-AS1Q8TBR5 109 aa5.85□□□□□ -1.47
NDE1-207ENST00000573203 SPANXDQ9BXN6 97 aa5.85□□□□□ -1.47
NDE1-207ENST00000573203 SPANXCQ9NY87 97 aa5.85□□□□□ -1.47
NDE1-207ENST00000573203 PLA2G2DQ9UNK4 145 aa5.85□□□□□ -1.47
NDE1-207ENST00000573203 IGHV3-64A0A075B6Q5 118 aa5.84□□□□□ -1.47
NDE1-207ENST00000573203 XCL1P47992 114 aa5.84□□□□□ -1.47
NDE1-207ENST00000573203 CIRBPQ14011 172 aaKnown RBP5.84□□□□□ -1.47
NDE1-207ENST00000573203 HIGD2BQ4VC39 106 aa5.84□□□□□ -1.47
NDE1-207ENST00000573203 C15orf56Q8N910 161 aa5.84□□□□□ -1.47
NDE1-207ENST00000573203 ZNF625Q96I27 306 aaPredicted RBP5.84□□□□□ -1.47
NDE1-207ENST00000573203 LITAFQ99732 161 aa5.84□□□□□ -1.47
NDE1-207ENST00000573203 SLPIP03973 132 aa5.83□□□□□ -1.48
NDE1-207ENST00000573203 RPL24P83731 157 aaKnown RBP5.83□□□□□ -1.48
NDE1-207ENST00000573203 FOXI1Q12951 378 aa5.83□□□□□ -1.48
NDE1-207ENST00000573203 UBE2V1Q13404 147 aa5.83□□□□□ -1.48
NDE1-207ENST00000573203 CD164L2Q6UWJ8 174 aa5.83□□□□□ -1.48
NDE1-207ENST00000573203 SDIM1Q6ZPB5 146 aa5.83□□□□□ -1.48
NDE1-207ENST00000573203 COPS9Q8WXC6 57 aa5.83□□□□□ -1.48
NDE1-207ENST00000573203 DPH3Q96FX2 82 aa5.82□□□□□ -1.48
NDE1-207ENST00000573203 NHP2Q9NX24 153 aaKnown RBP5.82□□□□□ -1.48
NDE1-207ENST00000573203 FLG2Q5D862 2391 aaPredicted RBP5.81□□□□□ -1.48
NDE1-207ENST00000573203 GVQW2A0A096LPI5 108 aaPredicted RBP5.81□□□□□ -1.48
NDE1-207ENST00000573203 PANO1I0J062 215 aa5.81□□□□□ -1.48
NDE1-207ENST00000573203 COX7B2Q8TF08 81 aa5.81□□□□□ -1.48
NDE1-207ENST00000573203 A0A0B4J2C4 111 aa5.8□□□□□ -1.48
NDE1-207ENST00000573203 A0A1W2PPM0 123 aa5.8□□□□□ -1.48
NDE1-207ENST00000573203 ADAMTSL4-AS1Q5T5F5 129 aa5.8□□□□□ -1.48
NDE1-207ENST00000573203 MUSTN1Q8IVN3 82 aa5.8□□□□□ -1.48
NDE1-207ENST00000573203 Q8IZM0 81 aa5.8□□□□□ -1.48
NDE1-207ENST00000573203 H3BUT2 72 aa5.79□□□□□ -1.48
NDE1-207ENST00000573203 ZNF561-AS1K7EIQ3 104 aa5.79□□□□□ -1.48
NDE1-207ENST00000573203 COX7A2LO14548 114 aa5.79□□□□□ -1.48
NDE1-207ENST00000573203 CHTF8P0CG12 524 aa5.79□□□□□ -1.48
NDE1-207ENST00000573203 CFC1BP0CG36 223 aa5.79□□□□□ -1.48
NDE1-207ENST00000573203 CFC1P0CG37 223 aa5.79□□□□□ -1.48
NDE1-207ENST00000573203 FABP2P12104 132 aa5.79□□□□□ -1.48
NDE1-207ENST00000573203 MALP21145 153 aa5.79□□□□□ -1.48
NDE1-207ENST00000573203 CXCL5P42830 114 aa5.79□□□□□ -1.48
NDE1-207ENST00000573203 RPL37AP61513 92 aaKnown RBP5.79□□□□□ -1.48
NDE1-207ENST00000573203 VAMP3Q15836 100 aa5.79□□□□□ -1.48
NDE1-207ENST00000573203 GTF2H5Q6ZYL4 71 aa5.79□□□□□ -1.48
NDE1-207ENST00000573203 LINC00526Q96FQ7 95 aa5.79□□□□□ -1.48
NDE1-207ENST00000573203 PRO1854Q9UHT4 67 aa5.79□□□□□ -1.48
NDE1-207ENST00000573203 MYCBP2O75592 4640 aa5.78□□□□□ -1.48
NDE1-207ENST00000573203 A4D1N5 150 aa5.78□□□□□ -1.48
NDE1-207ENST00000573203 GAGE10A6NGK3 116 aa5.78□□□□□ -1.48
NDE1-207ENST00000573203 PRSS2P07478 247 aa5.78□□□□□ -1.48
NDE1-207ENST00000573203 SPACA4Q8TDM5 124 aa5.78□□□□□ -1.48
NDE1-207ENST00000573203 CDIP1Q9H305 208 aa5.78□□□□□ -1.48
NDE1-207ENST00000573203 DMBT1Q9UGM3 2413 aaPredicted RBP5.78□□□□□ -1.48
NDE1-207ENST00000573203 A0A087WYN8 130 aa5.77□□□□□ -1.49
NDE1-207ENST00000573203 IGKV2-24A0A0C4DH68 120 aa5.77□□□□□ -1.49
NDE1-207ENST00000573203 LOC107984156A0A0G2JMH3 177 aa5.77□□□□□ -1.49
NDE1-207ENST00000573203 K7EP34 96 aa5.77□□□□□ -1.49
NDE1-207ENST00000573203 APOMO95445 188 aa5.77□□□□□ -1.49
NDE1-207ENST00000573203 KRTAP10-4P60372 401 aaPredicted RBP5.77□□□□□ -1.49
NDE1-207ENST00000573203 SYCNQ0VAF6 134 aa5.77□□□□□ -1.49
NDE1-207ENST00000573203 COX17Q14061 63 aa5.77□□□□□ -1.49
NDE1-207ENST00000573203 KIAA0087Q14695 138 aa5.77□□□□□ -1.49
NDE1-207ENST00000573203 C6orf226Q5I0X4 101 aa5.77□□□□□ -1.49
NDE1-207ENST00000573203 C5orf38Q86SI9 138 aa5.77□□□□□ -1.49
NDE1-207ENST00000573203 ARL17AQ8IVW1 177 aa5.77□□□□□ -1.49
NDE1-207ENST00000573203 LINC00308Q8TCZ7 52 aa5.77□□□□□ -1.49
NDE1-207ENST00000573203 RAB37Q96AX2 223 aa5.77□□□□□ -1.49
NDE1-207ENST00000573203 CARD19Q96LW7 228 aa5.77□□□□□ -1.49
NDE1-207ENST00000573203 PKIGQ9Y2B9 76 aa5.77□□□□□ -1.49
NDE1-207ENST00000573203 K7ERJ3 54 aa5.76□□□□□ -1.49
NDE1-207ENST00000573203 MEIG1Q5JSS6 88 aa5.76□□□□□ -1.49
NDE1-207ENST00000573203 LYRM7Q5U5X0 104 aa5.76□□□□□ -1.49
NDE1-207ENST00000573203 A0A096LNI7 61 aa5.75□□□□□ -1.49
NDE1-207ENST00000573203 F8WDY8 70 aa5.75□□□□□ -1.49
NDE1-207ENST00000573203 CAMK2N2Q96S95 79 aa5.75□□□□□ -1.49
NDE1-207ENST00000573203 PLAC8Q9NZF1 115 aa5.75□□□□□ -1.49
NDE1-207ENST00000573203 TRBV20-1A0A075B6N2 111 aa5.74□□□□□ -1.49
NDE1-207ENST00000573203 KRTAP29-1A8MX34 341 aaPredicted RBP5.74□□□□□ -1.49
NDE1-207ENST00000573203 TSPAN13O95857 204 aa5.74□□□□□ -1.49
NDE1-207ENST00000573203 SPAG11BQ08648 103 aa5.74□□□□□ -1.49
NDE1-207ENST00000573203 LCE5AQ5TCM9 118 aa5.74□□□□□ -1.49
NDE1-207ENST00000573203 C7orf33Q8WU49 177 aa5.74□□□□□ -1.49
NDE1-207ENST00000573203 LINC00474Q9P2X8 69 aa5.74□□□□□ -1.49
NDE1-207ENST00000573203 ERG28Q9UKR5 140 aa5.74□□□□□ -1.49
NDE1-207ENST00000573203 SPCS1Q9Y6A9 102 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 128.5 ms