RNA–Protein interactions for RNA: ENST00000573153.5

SMG6-212, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-212ENST00000573153 SCO1O75880 301 aa10.28□□□□□ -0.76
SMG6-212ENST00000573153 HERV-K104P63124 156 aa10.26□□□□□ -0.77
SMG6-212ENST00000573153 HSPB8Q9UJY1 196 aa10.26□□□□□ -0.77
SMG6-212ENST00000573153 IGKV2-28A0A075B6P5 120 aa10.25□□□□□ -0.77
SMG6-212ENST00000573153 A0A087X002 238 aa10.25□□□□□ -0.77
SMG6-212ENST00000573153 IGKV2D-28P01615 120 aa10.25□□□□□ -0.77
SMG6-212ENST00000573153 PLNP26678 52 aa10.25□□□□□ -0.77
SMG6-212ENST00000573153 LINC00158P58513 81 aa10.25□□□□□ -0.77
SMG6-212ENST00000573153 LINC00587B1AMM8 73 aa10.23□□□□□ -0.77
SMG6-212ENST00000573153 TMEM126AQ9H061 195 aa10.23□□□□□ -0.77
SMG6-212ENST00000573153 NDUFA12Q9UI09 145 aa10.23□□□□□ -0.77
SMG6-212ENST00000573153 H0Y8G0 127 aa10.22□□□□□ -0.77
SMG6-212ENST00000573153 SMIM13P0DJ93 91 aa10.22□□□□□ -0.77
SMG6-212ENST00000573153 UBE2AP49459 152 aa10.22□□□□□ -0.77
SMG6-212ENST00000573153 MYMXA0A1B0GTQ4 84 aa10.21□□□□□ -0.77
SMG6-212ENST00000573153 M0R378 163 aa10.21□□□□□ -0.77
SMG6-212ENST00000573153 LEPROTO15243 131 aa10.21□□□□□ -0.77
SMG6-212ENST00000573153 DPM2O94777 84 aa10.21□□□□□ -0.77
SMG6-212ENST00000573153 TSPEAR-AS2P59090 65 aa10.2□□□□□ -0.78
SMG6-212ENST00000573153 PLEKHB2Q96CS7 222 aa10.2□□□□□ -0.78
SMG6-212ENST00000573153 A0A0U1RRA0 63 aa10.19□□□□□ -0.78
SMG6-212ENST00000573153 TMEM238C9JI98 176 aa10.19□□□□□ -0.78
SMG6-212ENST00000573153 FABP4P15090 132 aa10.19□□□□□ -0.78
SMG6-212ENST00000573153 MEIG1Q5JSS6 88 aa10.19□□□□□ -0.78
SMG6-212ENST00000573153 MIR7-3HGQ8N6C7 128 aa10.19□□□□□ -0.78
SMG6-212ENST00000573153 LOC107984156A0A0G2JMH3 177 aa10.18□□□□□ -0.78
SMG6-212ENST00000573153 HIST1H2BKO60814 126 aa10.18□□□□□ -0.78
SMG6-212ENST00000573153 IGKCP01834 107 aa10.18□□□□□ -0.78
SMG6-212ENST00000573153 HIST1H2BJP06899 126 aa10.18□□□□□ -0.78
SMG6-212ENST00000573153 CRYGAP11844 174 aa10.18□□□□□ -0.78
SMG6-212ENST00000573153 HIST1H2BOP23527 126 aa10.18□□□□□ -0.78
SMG6-212ENST00000573153 HIST1H2BBP33778 126 aa10.18□□□□□ -0.78
SMG6-212ENST00000573153 HIST1H2BDP58876 126 aa10.18□□□□□ -0.78
SMG6-212ENST00000573153 HIST1H2BCP62807 126 aa10.18□□□□□ -0.78
SMG6-212ENST00000573153 HIST2H2BEQ16778 126 aa10.18□□□□□ -0.78
SMG6-212ENST00000573153 FAM229BQ4G0N7 80 aa10.18□□□□□ -0.78
SMG6-212ENST00000573153 KRTAP13-2Q52LG2 175 aa10.18□□□□□ -0.78
SMG6-212ENST00000573153 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.18□□□□□ -0.78
SMG6-212ENST00000573153 ARL17AQ8IVW1 177 aa10.18□□□□□ -0.78
SMG6-212ENST00000573153 HIST1H2BHQ93079 126 aa10.18□□□□□ -0.78
SMG6-212ENST00000573153 HIST1H2BNQ99877 126 aa10.18□□□□□ -0.78
SMG6-212ENST00000573153 HIST1H2BMQ99879 126 aa10.18□□□□□ -0.78
SMG6-212ENST00000573153 ANAPC11Q9NYG5 84 aa10.18□□□□□ -0.78
SMG6-212ENST00000573153 IGKV2D-26A0A0A0MRZ7 120 aa10.17□□□□□ -0.78
SMG6-212ENST00000573153 J3QQQ9 107 aa10.17□□□□□ -0.78
SMG6-212ENST00000573153 ATP6V1G1O75348 118 aa10.17□□□□□ -0.78
SMG6-212ENST00000573153 NMUP48645 174 aa10.17□□□□□ -0.78
SMG6-212ENST00000573153 HERVK_113P61574 105 aa10.17□□□□□ -0.78
SMG6-212ENST00000573153 MAP1LC3CQ9BXW4 147 aa10.17□□□□□ -0.78
SMG6-212ENST00000573153 PRLHP81277 87 aa10.16□□□□□ -0.78
SMG6-212ENST00000573153 FAM19A1Q7Z5A9 133 aa10.16□□□□□ -0.78
SMG6-212ENST00000573153 BOD1L2Q8IYS8 172 aa10.16□□□□□ -0.78
SMG6-212ENST00000573153 PRYO14603 147 aa10.14□□□□□ -0.79
SMG6-212ENST00000573153 PMCHL2Q9BQD1 86 aa10.14□□□□□ -0.79
SMG6-212ENST00000573153 SPRR1AP35321 89 aa10.13□□□□□ -0.79
SMG6-212ENST00000573153 KCNQ1DNQ9H478 68 aa10.13□□□□□ -0.79
SMG6-212ENST00000573153 TYMSOSQ8TAI1 123 aa10.12□□□□□ -0.79
SMG6-212ENST00000573153 E9PLD3 99 aa10.11□□□□□ -0.79
SMG6-212ENST00000573153 SYS1-DBNDD2H3BUS1 97 aa10.11□□□□□ -0.79
SMG6-212ENST00000573153 LGALS3P17931 250 aaKnown RBP10.11□□□□□ -0.79
SMG6-212ENST00000573153 LINC00337Q8N6G1 96 aa10.11□□□□□ -0.79
SMG6-212ENST00000573153 KRTAP4-16G5E9R7 235 aaPredicted RBP10.1□□□□□ -0.79
SMG6-212ENST00000573153 COA6Q5JTJ3 125 aaKnown RBP10.1□□□□□ -0.79
SMG6-212ENST00000573153 TRBV10-2A0A0K0K1G8 114 aa10.09□□□□□ -0.79
SMG6-212ENST00000573153 NCR3O14931 201 aa10.09□□□□□ -0.79
SMG6-212ENST00000573153 LINC01545Q5VT33 79 aa10.09□□□□□ -0.79
SMG6-212ENST00000573153 CTAG1AP78358 180 aa10.08□□□□□ -0.8
SMG6-212ENST00000573153 DAND5Q8N907 189 aa10.08□□□□□ -0.8
SMG6-212ENST00000573153 TRBV10-3A0A0K0K1G6 114 aa10.07□□□□□ -0.8
SMG6-212ENST00000573153 NDUFC2O95298 119 aa10.07□□□□□ -0.8
SMG6-212ENST00000573153 PET117Q6UWS5 81 aa10.07□□□□□ -0.8
SMG6-212ENST00000573153 MUC2Q02817 5179 aa10.06□□□□□ -0.8
SMG6-212ENST00000573153 HIGD2AQ9BW72 106 aa10.06□□□□□ -0.8
SMG6-212ENST00000573153 SPANXB1Q9NS25 103 aaPredicted RBP10.06□□□□□ -0.8
SMG6-212ENST00000573153 A0A0J9YXY3 114 aa10.05□□□□□ -0.8
SMG6-212ENST00000573153 TSPAN13O95857 204 aa10.05□□□□□ -0.8
SMG6-212ENST00000573153 SPRR4Q96PI1 79 aa10.05□□□□□ -0.8
SMG6-212ENST00000573153 PRR4Q16378 134 aa10.04□□□□□ -0.8
SMG6-212ENST00000573153 MIEN1Q9BRT3 115 aa10.04□□□□□ -0.8
SMG6-212ENST00000573153 ZNF706Q9Y5V0 76 aaPredicted RBP10.04□□□□□ -0.8
SMG6-212ENST00000573153 MUC17Q685J3 4493 aa10.04□□□□□ -0.8
SMG6-212ENST00000573153 S100A12P80511 92 aa10.03□□□□□ -0.8
SMG6-212ENST00000573153 ADAMTSL4-AS1Q5T5F5 129 aa10.03□□□□□ -0.8
SMG6-212ENST00000573153 LINC00304Q8N9R0 145 aa10.03□□□□□ -0.8
SMG6-212ENST00000573153 ETDCA0A1B0GVM5 59 aa10.02□□□□□ -0.81
SMG6-212ENST00000573153 IGLV6-57P01721 117 aa10.02□□□□□ -0.81
SMG6-212ENST00000573153 C3orf79P0CE67 100 aa10.02□□□□□ -0.81
SMG6-212ENST00000573153 DDTP30046 118 aa10.02□□□□□ -0.81
SMG6-212ENST00000573153 SOSTDC1Q6X4U4 206 aa10.02□□□□□ -0.81
SMG6-212ENST00000573153 TIMM17BO60830 172 aa10.01□□□□□ -0.81
SMG6-212ENST00000573153 C3orf22Q8N5N4 141 aa10.01□□□□□ -0.81
SMG6-212ENST00000573153 SMCR5Q8TEV8 140 aa10.01□□□□□ -0.81
SMG6-212ENST00000573153 LITAFQ99732 161 aa10.01□□□□□ -0.81
SMG6-212ENST00000573153 B5MCH6 92 aa10□□□□□ -0.81
SMG6-212ENST00000573153 EIF4EBP3O60516 100 aaPredicted RBP10□□□□□ -0.81
SMG6-212ENST00000573153 LINC00483Q53H64 154 aa9.98□□□□□ -0.81
SMG6-212ENST00000573153 Q6ZRX8 168 aa9.97□□□□□ -0.81
SMG6-212ENST00000573153 S100A7L2Q5SY68 101 aa9.96□□□□□ -0.82
SMG6-212ENST00000573153 LINC00308Q8TCZ7 52 aa9.96□□□□□ -0.82
SMG6-212ENST00000573153 RETNLBQ9BQ08 111 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms