RNA–Protein interactions for RNA: ENST00000573126.1

RPAIN-212, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 2,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-212ENST00000573126 IGKV3D-7A0A0C4DH55 119 aa7.58□□□□□ -1.2
RPAIN-212ENST00000573126 RETNQ9HD89 108 aa7.58□□□□□ -1.2
RPAIN-212ENST00000573126 RPL18AQ02543 176 aaKnown RBP7.57□□□□□ -1.2
RPAIN-212ENST00000573126 OXLD1Q5BKU9 147 aa7.57□□□□□ -1.2
RPAIN-212ENST00000573126 LYPD5Q6UWN5 251 aa7.57□□□□□ -1.2
RPAIN-212ENST00000573126 WFDC9Q8NEX5 89 aa7.57□□□□□ -1.2
RPAIN-212ENST00000573126 ANK2Q01484 3957 aa7.57□□□□□ -1.2
RPAIN-212ENST00000573126 MAST4O15021 2626 aa7.57□□□□□ -1.2
RPAIN-212ENST00000573126 LINC00167Q96N53 147 aa7.56□□□□□ -1.2
RPAIN-212ENST00000573126 XAGE1AQ9HD64 81 aa7.56□□□□□ -1.2
RPAIN-212ENST00000573126 A0A0J9YWU9 116 aa7.55□□□□□ -1.2
RPAIN-212ENST00000573126 WFDC10BQ8IUB3 73 aa7.55□□□□□ -1.2
RPAIN-212ENST00000573126 F8P00451 2351 aa7.55□□□□□ -1.2
RPAIN-212ENST00000573126 A0A1B0GX51 115 aa7.55□□□□□ -1.2
RPAIN-212ENST00000573126 TMEM256-PLSCR3K7ERE1 68 aa7.55□□□□□ -1.2
RPAIN-212ENST00000573126 TENM3Q9P273 2699 aa7.54□□□□□ -1.2
RPAIN-212ENST00000573126 HIGD2BQ4VC39 106 aa7.54□□□□□ -1.2
RPAIN-212ENST00000573126 C6orf48Q9UBA6 75 aa7.54□□□□□ -1.2
RPAIN-212ENST00000573126 CCKP06307 115 aa7.53□□□□□ -1.2
RPAIN-212ENST00000573126 LINC00575Q6W349 94 aa7.53□□□□□ -1.2
RPAIN-212ENST00000573126 A0A087WVE0 104 aa7.53□□□□□ -1.2
RPAIN-212ENST00000573126 JMJD7-PLA2G4BH0Y9G9 81 aa7.53□□□□□ -1.2
RPAIN-212ENST00000573126 WIPF1O43516 503 aa7.53□□□□□ -1.2
RPAIN-212ENST00000573126 KPRPQ5T749 579 aaPredicted RBP7.53□□□□□ -1.2
RPAIN-212ENST00000573126 STAB1Q9NY15 2570 aa7.53□□□□□ -1.2
RPAIN-212ENST00000573126 Q6ZTC4 211 aa7.52□□□□□ -1.21
RPAIN-212ENST00000573126 IGLV6-57P01721 117 aa7.51□□□□□ -1.21
RPAIN-212ENST00000573126 TRBV10-3A0A0K0K1G6 114 aa7.51□□□□□ -1.21
RPAIN-212ENST00000573126 hADV29S1A0JD25 119 aa7.51□□□□□ -1.21
RPAIN-212ENST00000573126 KRTAP10-11P60412 298 aa7.51□□□□□ -1.21
RPAIN-212ENST00000573126 Q6JHZ5 121 aa7.51□□□□□ -1.21
RPAIN-212ENST00000573126 ZNF561-AS1K7EIQ3 104 aa7.5□□□□□ -1.21
RPAIN-212ENST00000573126 GVQW2A0A096LPI5 108 aaPredicted RBP7.5□□□□□ -1.21
RPAIN-212ENST00000573126 MUC7Q8TAX7 377 aa7.5□□□□□ -1.21
RPAIN-212ENST00000573126 HIST1H4AP62805 103 aaKnown RBP7.49□□□□□ -1.21
RPAIN-212ENST00000573126 Q6ZQY7 126 aa7.49□□□□□ -1.21
RPAIN-212ENST00000573126 CAMK2N2Q96S95 79 aa7.49□□□□□ -1.21
RPAIN-212ENST00000573126 NOTCH1P46531 2555 aa7.49□□□□□ -1.21
RPAIN-212ENST00000573126 C9orf153Q5TBE3 101 aa7.49□□□□□ -1.21
RPAIN-212ENST00000573126 C3orf22Q8N5N4 141 aa7.49□□□□□ -1.21
RPAIN-212ENST00000573126 LAMTOR3Q9UHA4 124 aa7.49□□□□□ -1.21
RPAIN-212ENST00000573126 FBN1P35555 2871 aaKnown RBP7.48□□□□□ -1.21
RPAIN-212ENST00000573126 TRAV23DV6A0A075B6W5 121 aa7.48□□□□□ -1.21
RPAIN-212ENST00000573126 UQCRQO14949 82 aa7.47□□□□□ -1.21
RPAIN-212ENST00000573126 ESRGQ1W209 222 aa7.47□□□□□ -1.21
RPAIN-212ENST00000573126 RBM3P98179 157 aaKnown RBP7.47□□□□□ -1.21
RPAIN-212ENST00000573126 Q6ZRU5 148 aa7.47□□□□□ -1.21
RPAIN-212ENST00000573126 ATOX1O00244 68 aa7.46□□□□□ -1.21
RPAIN-212ENST00000573126 KRTAP26-1Q6PEX3 210 aa7.46□□□□□ -1.21
RPAIN-212ENST00000573126 DIRC1Q969H9 104 aa7.46□□□□□ -1.21
RPAIN-212ENST00000573126 ZNF73O43830 326 aaPredicted RBP7.46□□□□□ -1.22
RPAIN-212ENST00000573126 C15orf56Q8N910 161 aa7.46□□□□□ -1.22
RPAIN-212ENST00000573126 M0R2N4 97 aa7.45□□□□□ -1.22
RPAIN-212ENST00000573126 COX7CP15954 63 aa7.45□□□□□ -1.22
RPAIN-212ENST00000573126 C2orf48Q96LS8 159 aa7.45□□□□□ -1.22
RPAIN-212ENST00000573126 H3BNG1 76 aa7.45□□□□□ -1.22
RPAIN-212ENST00000573126 SMIM20Q8N5G0 67 aa7.45□□□□□ -1.22
RPAIN-212ENST00000573126 Q6ZQT0 140 aa7.44□□□□□ -1.22
RPAIN-212ENST00000573126 USP17L23D6RBM5 183 aa7.44□□□□□ -1.22
RPAIN-212ENST00000573126 C1orf43Q9BWL3 253 aa7.44□□□□□ -1.22
RPAIN-212ENST00000573126 UBL5Q9BZL1 73 aa7.44□□□□□ -1.22
RPAIN-212ENST00000573126 IGKV2D-24A0A075B6R9 120 aa7.43□□□□□ -1.22
RPAIN-212ENST00000573126 VPREB1P12018 145 aa7.43□□□□□ -1.22
RPAIN-212ENST00000573126 FAM19A1Q7Z5A9 133 aa7.43□□□□□ -1.22
RPAIN-212ENST00000573126 EGFEM1PQ0D2K5 195 aa7.43□□□□□ -1.22
RPAIN-212ENST00000573126 DEFB131BA0A096LNP1 70 aa7.43□□□□□ -1.22
RPAIN-212ENST00000573126 NDUFC2-KCTD14E9PQ53 114 aa7.42□□□□□ -1.22
RPAIN-212ENST00000573126 COX7BP24311 80 aa7.42□□□□□ -1.22
RPAIN-212ENST00000573126 DSCR8Q96T75 97 aa7.42□□□□□ -1.22
RPAIN-212ENST00000573126 KRTAP24-1Q3LI83 254 aa7.42□□□□□ -1.22
RPAIN-212ENST00000573126 Q6ZRP5 223 aa7.42□□□□□ -1.22
RPAIN-212ENST00000573126 ELOF1P60002 83 aaKnown RBP7.41□□□□□ -1.22
RPAIN-212ENST00000573126 C11orf45Q8TAV5 145 aa7.41□□□□□ -1.22
RPAIN-212ENST00000573126 LOC110117498A0A087WWA1 95 aa7.41□□□□□ -1.22
RPAIN-212ENST00000573126 CYSTM1Q9H1C7 97 aa7.41□□□□□ -1.22
RPAIN-212ENST00000573126 ATP5EP2Q5VTU8 51 aa7.4□□□□□ -1.23
RPAIN-212ENST00000573126 M0R378 163 aa7.39□□□□□ -1.23
RPAIN-212ENST00000573126 LINC01556Q5JQF7 62 aa7.39□□□□□ -1.23
RPAIN-212ENST00000573126 SERP2Q8N6R1 65 aa7.39□□□□□ -1.23
RPAIN-212ENST00000573126 CRYGAP11844 174 aa7.38□□□□□ -1.23
RPAIN-212ENST00000573126 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.38□□□□□ -1.23
RPAIN-212ENST00000573126 UPK3BQ9BT76 320 aa7.38□□□□□ -1.23
RPAIN-212ENST00000573126 HAMPP81172 84 aa7.38□□□□□ -1.23
RPAIN-212ENST00000573126 NBEAL1Q6ZS30 2694 aa7.38□□□□□ -1.23
RPAIN-212ENST00000573126 PRB2P02812 416 aaPredicted RBP7.37□□□□□ -1.23
RPAIN-212ENST00000573126 CMYA5Q8N3K9 4069 aa7.37□□□□□ -1.23
RPAIN-212ENST00000573126 COL6A5A8TX70 2615 aa7.37□□□□□ -1.23
RPAIN-212ENST00000573126 SYCNQ0VAF6 134 aa7.37□□□□□ -1.23
RPAIN-212ENST00000573126 Q6ZVQ6 151 aa7.37□□□□□ -1.23
RPAIN-212ENST00000573126 GHRHP01286 108 aa7.36□□□□□ -1.23
RPAIN-212ENST00000573126 LINC01547P58512 204 aaPredicted RBP7.36□□□□□ -1.23
RPAIN-212ENST00000573126 LINC00528Q8N1L1 170 aa7.36□□□□□ -1.23
RPAIN-212ENST00000573126 TRBV7-4A0A0J9YYF1 115 aa7.35□□□□□ -1.23
RPAIN-212ENST00000573126 TRBV7-6A0A0J9YX20 115 aa7.35□□□□□ -1.23
RPAIN-212ENST00000573126 SERTAD4-AS1Q5TG53 156 aa7.35□□□□□ -1.23
RPAIN-212ENST00000573126 H3BQ85 93 aa7.34□□□□□ -1.23
RPAIN-212ENST00000573126 PDE6GP18545 87 aa7.34□□□□□ -1.23
RPAIN-212ENST00000573126 DNAH10OSP0CZ25 163 aa7.33□□□□□ -1.24
RPAIN-212ENST00000573126 CASC10Q5T4H9 136 aa7.33□□□□□ -1.24
RPAIN-212ENST00000573126 SCXQ7RTU7 201 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms