RNA–Protein interactions for RNA: ENST00000572756.5

NDE1-205, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 5

Gene NDE1, Length 915 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-205ENST00000572756 IGKV2-28A0A075B6P5 120 aa9.65□□□□□ -0.86
NDE1-205ENST00000572756 HIST1H2BKO60814 126 aa9.65□□□□□ -0.86
NDE1-205ENST00000572756 IGKV2D-28P01615 120 aa9.65□□□□□ -0.86
NDE1-205ENST00000572756 HIST1H2BJP06899 126 aa9.65□□□□□ -0.86
NDE1-205ENST00000572756 HIST1H2BOP23527 126 aa9.65□□□□□ -0.86
NDE1-205ENST00000572756 PLNP26678 52 aa9.65□□□□□ -0.86
NDE1-205ENST00000572756 HIST1H2BBP33778 126 aa9.65□□□□□ -0.86
NDE1-205ENST00000572756 HIST1H2BDP58876 126 aa9.65□□□□□ -0.86
NDE1-205ENST00000572756 HIST1H2BCP62807 126 aa9.65□□□□□ -0.86
NDE1-205ENST00000572756 HERV-K104P63124 156 aa9.65□□□□□ -0.86
NDE1-205ENST00000572756 HIST2H2BEQ16778 126 aa9.65□□□□□ -0.86
NDE1-205ENST00000572756 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.65□□□□□ -0.86
NDE1-205ENST00000572756 HIST1H2BHQ93079 126 aa9.65□□□□□ -0.86
NDE1-205ENST00000572756 HIST1H2BNQ99877 126 aa9.65□□□□□ -0.86
NDE1-205ENST00000572756 HIST1H2BMQ99879 126 aa9.65□□□□□ -0.86
NDE1-205ENST00000572756 NDUFA12Q9UI09 145 aa9.65□□□□□ -0.86
NDE1-205ENST00000572756 SMIM13P0DJ93 91 aa9.64□□□□□ -0.87
NDE1-205ENST00000572756 TSPEAR-AS2P59090 65 aa9.64□□□□□ -0.87
NDE1-205ENST00000572756 A0A0U1RRA0 63 aa9.63□□□□□ -0.87
NDE1-205ENST00000572756 LEPROTO15243 131 aa9.63□□□□□ -0.87
NDE1-205ENST00000572756 DPM2O94777 84 aa9.63□□□□□ -0.87
NDE1-205ENST00000572756 PMCHL2Q9BQD1 86 aa9.63□□□□□ -0.87
NDE1-205ENST00000572756 MYMXA0A1B0GTQ4 84 aa9.61□□□□□ -0.87
NDE1-205ENST00000572756 IGKCP01834 107 aa9.61□□□□□ -0.87
NDE1-205ENST00000572756 MEIG1Q5JSS6 88 aa9.61□□□□□ -0.87
NDE1-205ENST00000572756 PLEKHB2Q96CS7 222 aa9.61□□□□□ -0.87
NDE1-205ENST00000572756 UBR4Q5T4S7 5183 aa9.6□□□□□ -0.87
NDE1-205ENST00000572756 TMEM238C9JI98 176 aa9.6□□□□□ -0.87
NDE1-205ENST00000572756 RPL13AP40429 203 aaKnown RBP9.6□□□□□ -0.87
NDE1-205ENST00000572756 MIR7-3HGQ8N6C7 128 aa9.6□□□□□ -0.87
NDE1-205ENST00000572756 MAP1LC3CQ9BXW4 147 aa9.6□□□□□ -0.87
NDE1-205ENST00000572756 TMEM126AQ9H061 195 aa9.6□□□□□ -0.87
NDE1-205ENST00000572756 LINC00587B1AMM8 73 aa9.59□□□□□ -0.87
NDE1-205ENST00000572756 J3QQQ9 107 aa9.59□□□□□ -0.87
NDE1-205ENST00000572756 M0R378 163 aa9.59□□□□□ -0.87
NDE1-205ENST00000572756 UBE2AP49459 152 aa9.59□□□□□ -0.87
NDE1-205ENST00000572756 LRP2P98164 4655 aa9.58□□□□□ -0.88
NDE1-205ENST00000572756 HERVK_113P61574 105 aa9.58□□□□□ -0.88
NDE1-205ENST00000572756 A0A087X002 238 aa9.57□□□□□ -0.88
NDE1-205ENST00000572756 ATP6V1G1O75348 118 aa9.57□□□□□ -0.88
NDE1-205ENST00000572756 BOD1L2Q8IYS8 172 aa9.57□□□□□ -0.88
NDE1-205ENST00000572756 LOC107984156A0A0G2JMH3 177 aa9.56□□□□□ -0.88
NDE1-205ENST00000572756 SYS1-DBNDD2H3BUS1 97 aa9.56□□□□□ -0.88
NDE1-205ENST00000572756 NMUP48645 174 aa9.56□□□□□ -0.88
NDE1-205ENST00000572756 PRLHP81277 87 aa9.56□□□□□ -0.88
NDE1-205ENST00000572756 ARL17AQ8IVW1 177 aa9.56□□□□□ -0.88
NDE1-205ENST00000572756 COA6Q5JTJ3 125 aaKnown RBP9.55□□□□□ -0.88
NDE1-205ENST00000572756 FAM19A1Q7Z5A9 133 aa9.55□□□□□ -0.88
NDE1-205ENST00000572756 IGKV2D-26A0A0A0MRZ7 120 aa9.54□□□□□ -0.88
NDE1-205ENST00000572756 E9PLD3 99 aa9.54□□□□□ -0.88
NDE1-205ENST00000572756 NCR3O14931 201 aa9.53□□□□□ -0.88
NDE1-205ENST00000572756 LGALS3P17931 250 aaKnown RBP9.53□□□□□ -0.88
NDE1-205ENST00000572756 LINC01545Q5VT33 79 aa9.53□□□□□ -0.88
NDE1-205ENST00000572756 DAND5Q8N907 189 aa9.53□□□□□ -0.88
NDE1-205ENST00000572756 ANAPC11Q9NYG5 84 aa9.53□□□□□ -0.88
NDE1-205ENST00000572756 CRYGAP11844 174 aa9.52□□□□□ -0.89
NDE1-205ENST00000572756 PRYO14603 147 aa9.51□□□□□ -0.89
NDE1-205ENST00000572756 SPRR1AP35321 89 aa9.51□□□□□ -0.89
NDE1-205ENST00000572756 FAM229BQ4G0N7 80 aa9.51□□□□□ -0.89
NDE1-205ENST00000572756 KRTAP13-2Q52LG2 175 aa9.51□□□□□ -0.89
NDE1-205ENST00000572756 PET117Q6UWS5 81 aa9.51□□□□□ -0.89
NDE1-205ENST00000572756 KCNQ1DNQ9H478 68 aa9.51□□□□□ -0.89
NDE1-205ENST00000572756 A0A0J9YXY3 114 aa9.49□□□□□ -0.89
NDE1-205ENST00000572756 TRBV10-3A0A0K0K1G6 114 aa9.49□□□□□ -0.89
NDE1-205ENST00000572756 KRTAP4-16G5E9R7 235 aaPredicted RBP9.49□□□□□ -0.89
NDE1-205ENST00000572756 C3orf79P0CE67 100 aa9.49□□□□□ -0.89
NDE1-205ENST00000572756 LINC00337Q8N6G1 96 aa9.48□□□□□ -0.89
NDE1-205ENST00000572756 TYMSOSQ8TAI1 123 aa9.48□□□□□ -0.89
NDE1-205ENST00000572756 TRBV10-2A0A0K0K1G8 114 aa9.47□□□□□ -0.89
NDE1-205ENST00000572756 ADAMTSL4-AS1Q5T5F5 129 aa9.47□□□□□ -0.89
NDE1-205ENST00000572756 EIF4EBP3O60516 100 aaPredicted RBP9.46□□□□□ -0.9
NDE1-205ENST00000572756 NDUFC2O95298 119 aa9.46□□□□□ -0.9
NDE1-205ENST00000572756 SOSTDC1Q6X4U4 206 aa9.46□□□□□ -0.9
NDE1-205ENST00000572756 HIGD2AQ9BW72 106 aa9.46□□□□□ -0.9
NDE1-205ENST00000572756 MIEN1Q9BRT3 115 aa9.45□□□□□ -0.9
NDE1-205ENST00000572756 SPANXB1Q9NS25 103 aaPredicted RBP9.45□□□□□ -0.9
NDE1-205ENST00000572756 LPAP08519 4548 aa9.45□□□□□ -0.9
NDE1-205ENST00000572756 LITAFQ99732 161 aa9.44□□□□□ -0.9
NDE1-205ENST00000572756 DDTP30046 118 aa9.43□□□□□ -0.9
NDE1-205ENST00000572756 KRTDAPP60985 99 aa9.43□□□□□ -0.9
NDE1-205ENST00000572756 SPRR4Q96PI1 79 aa9.43□□□□□ -0.9
NDE1-205ENST00000572756 ETDCA0A1B0GVM5 59 aa9.42□□□□□ -0.9
NDE1-205ENST00000572756 TIMM17BO60830 172 aa9.42□□□□□ -0.9
NDE1-205ENST00000572756 IGLV6-57P01721 117 aa9.42□□□□□ -0.9
NDE1-205ENST00000572756 TSPAN13O95857 204 aa9.41□□□□□ -0.9
NDE1-205ENST00000572756 NPC2P61916 151 aa9.41□□□□□ -0.9
NDE1-205ENST00000572756 SMCR5Q8TEV8 140 aa9.41□□□□□ -0.9
NDE1-205ENST00000572756 TTTY13Q9BZ97 58 aa9.41□□□□□ -0.9
NDE1-205ENST00000572756 B5MCH6 92 aa9.4□□□□□ -0.9
NDE1-205ENST00000572756 S100A12P80511 92 aa9.4□□□□□ -0.9
NDE1-205ENST00000572756 ZNF815PA8K554 130 aa9.39□□□□□ -0.91
NDE1-205ENST00000572756 S100A1P23297 94 aa9.39□□□□□ -0.91
NDE1-205ENST00000572756 C3orf22Q8N5N4 141 aa9.39□□□□□ -0.91
NDE1-205ENST00000572756 LINC00308Q8TCZ7 52 aa9.39□□□□□ -0.91
NDE1-205ENST00000572756 ZNF706Q9Y5V0 76 aaPredicted RBP9.39□□□□□ -0.91
NDE1-205ENST00000572756 LINC00304Q8N9R0 145 aa9.38□□□□□ -0.91
NDE1-205ENST00000572756 C20orf202A1L168 122 aa9.37□□□□□ -0.91
NDE1-205ENST00000572756 PRR4Q16378 134 aa9.37□□□□□ -0.91
NDE1-205ENST00000572756 S100A7L2Q5SY68 101 aa9.37□□□□□ -0.91
NDE1-205ENST00000572756 ANKRD39Q53RE8 183 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 124.4 ms