RNA–Protein interactions for RNA: ENST00000571880.1

RAB40B-205, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40B, Length 1,020 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-205ENST00000571880 MUC2Q02817 5179 aa9.65□□□□□ -0.86
RAB40B-205ENST00000571880 LINC00158P58513 81 aa9.65□□□□□ -0.86
RAB40B-205ENST00000571880 RPL24P83731 157 aaKnown RBP9.65□□□□□ -0.86
RAB40B-205ENST00000571880 C3orf22Q8N5N4 141 aa9.65□□□□□ -0.86
RAB40B-205ENST00000571880 HIGD2AQ9BW72 106 aa9.65□□□□□ -0.86
RAB40B-205ENST00000571880 IGKV2D-26A0A0A0MRZ7 120 aa9.64□□□□□ -0.87
RAB40B-205ENST00000571880 FAM229BQ4G0N7 80 aa9.64□□□□□ -0.87
RAB40B-205ENST00000571880 A6NJY4 79 aa9.63□□□□□ -0.87
RAB40B-205ENST00000571880 NCR3O14931 201 aa9.62□□□□□ -0.87
RAB40B-205ENST00000571880 COX17Q14061 63 aa9.62□□□□□ -0.87
RAB40B-205ENST00000571880 LCE2DQ5TA82 110 aaPredicted RBP9.62□□□□□ -0.87
RAB40B-205ENST00000571880 CBLN2Q8IUK8 224 aa9.62□□□□□ -0.87
RAB40B-205ENST00000571880 TMEM223A0PJW6 202 aa9.61□□□□□ -0.87
RAB40B-205ENST00000571880 SMIM13P0DJ93 91 aa9.6□□□□□ -0.87
RAB40B-205ENST00000571880 IFI27L1Q96BM0 104 aa9.6□□□□□ -0.87
RAB40B-205ENST00000571880 H0Y8G0 127 aa9.59□□□□□ -0.87
RAB40B-205ENST00000571880 SNAPINO95295 136 aa9.59□□□□□ -0.87
RAB40B-205ENST00000571880 MEIG1Q5JSS6 88 aa9.59□□□□□ -0.87
RAB40B-205ENST00000571880 PLEKHB2Q96CS7 222 aa9.59□□□□□ -0.87
RAB40B-205ENST00000571880 KRTAP3-3Q9BYR6 98 aa9.59□□□□□ -0.87
RAB40B-205ENST00000571880 KRTAP3-2Q9BYR7 98 aa9.59□□□□□ -0.87
RAB40B-205ENST00000571880 NDUFA5Q16718 116 aa9.58□□□□□ -0.88
RAB40B-205ENST00000571880 SVBPQ8N300 66 aa9.58□□□□□ -0.88
RAB40B-205ENST00000571880 FAM19A2Q8N3H0 131 aa9.58□□□□□ -0.88
RAB40B-205ENST00000571880 SFTA2Q6UW10 78 aa9.57□□□□□ -0.88
RAB40B-205ENST00000571880 BOD1L2Q8IYS8 172 aa9.57□□□□□ -0.88
RAB40B-205ENST00000571880 ATP6V1G1O75348 118 aa9.56□□□□□ -0.88
RAB40B-205ENST00000571880 MIR7-3HGQ8N6C7 128 aa9.56□□□□□ -0.88
RAB40B-205ENST00000571880 YPEL4Q96NS1 127 aa9.56□□□□□ -0.88
RAB40B-205ENST00000571880 TRAV12-1A0A0B4J245 112 aa9.55□□□□□ -0.88
RAB40B-205ENST00000571880 CHCHD1Q96BP2 118 aaKnown RBP9.55□□□□□ -0.88
RAB40B-205ENST00000571880 SPRR4Q96PI1 79 aa9.55□□□□□ -0.88
RAB40B-205ENST00000571880 IGLV7-46A0A075B6I9 117 aa9.54□□□□□ -0.88
RAB40B-205ENST00000571880 PPDPFQ9H3Y8 114 aa9.54□□□□□ -0.88
RAB40B-205ENST00000571880 TSPEAR-AS2P59090 65 aa9.53□□□□□ -0.88
RAB40B-205ENST00000571880 DAND5Q8N907 189 aa9.53□□□□□ -0.88
RAB40B-205ENST00000571880 CDIP1Q9H305 208 aa9.53□□□□□ -0.88
RAB40B-205ENST00000571880 PRYO14603 147 aa9.52□□□□□ -0.89
RAB40B-205ENST00000571880 HSBP1O75506 76 aa9.52□□□□□ -0.89
RAB40B-205ENST00000571880 NDUFA12Q9UI09 145 aa9.52□□□□□ -0.89
RAB40B-205ENST00000571880 A0A0U1RQV1 116 aa9.51□□□□□ -0.89
RAB40B-205ENST00000571880 TRBV10-3A0A0K0K1G6 114 aa9.5□□□□□ -0.89
RAB40B-205ENST00000571880 MUC17Q685J3 4493 aa9.5□□□□□ -0.89
RAB40B-205ENST00000571880 ETDCA0A1B0GVM5 59 aa9.49□□□□□ -0.89
RAB40B-205ENST00000571880 TPRXLQ17RH7 258 aa9.49□□□□□ -0.89
RAB40B-205ENST00000571880 Q8NBF4 154 aa9.49□□□□□ -0.89
RAB40B-205ENST00000571880 PMCHL2Q9BQD1 86 aa9.49□□□□□ -0.89
RAB40B-205ENST00000571880 FAT4Q6V0I7 4981 aa9.48□□□□□ -0.89
RAB40B-205ENST00000571880 LINC00310P59036 64 aa9.48□□□□□ -0.89
RAB40B-205ENST00000571880 HERV-K104P63124 156 aa9.48□□□□□ -0.89
RAB40B-205ENST00000571880 SMCR5Q8TEV8 140 aa9.48□□□□□ -0.89
RAB40B-205ENST00000571880 ZNF706Q9Y5V0 76 aaPredicted RBP9.48□□□□□ -0.89
RAB40B-205ENST00000571880 SERF1AO75920 110 aa9.47□□□□□ -0.89
RAB40B-205ENST00000571880 MYMXA0A1B0GTQ4 84 aa9.46□□□□□ -0.9
RAB40B-205ENST00000571880 TRGC2P03986 189 aa9.46□□□□□ -0.9
RAB40B-205ENST00000571880 SPRR1AP35321 89 aa9.46□□□□□ -0.9
RAB40B-205ENST00000571880 KCNQ1DNQ9H478 68 aa9.46□□□□□ -0.9
RAB40B-205ENST00000571880 KRTAP4-16G5E9R7 235 aaPredicted RBP9.45□□□□□ -0.9
RAB40B-205ENST00000571880 LINC00337Q8N6G1 96 aa9.45□□□□□ -0.9
RAB40B-205ENST00000571880 ERC2-IT1O76042 136 aa9.44□□□□□ -0.9
RAB40B-205ENST00000571880 LEPROTL1O95214 131 aa9.44□□□□□ -0.9
RAB40B-205ENST00000571880 FABP4P15090 132 aa9.44□□□□□ -0.9
RAB40B-205ENST00000571880 GAGE2AQ6NT46 116 aa9.44□□□□□ -0.9
RAB40B-205ENST00000571880 IGLV9-49A0A0B4J1Y8 123 aa9.43□□□□□ -0.9
RAB40B-205ENST00000571880 LEPROTO15243 131 aa9.43□□□□□ -0.9
RAB40B-205ENST00000571880 NPC2P61916 151 aa9.43□□□□□ -0.9
RAB40B-205ENST00000571880 MAP1LC3CQ9BXW4 147 aa9.43□□□□□ -0.9
RAB40B-205ENST00000571880 DDTP30046 118 aa9.42□□□□□ -0.9
RAB40B-205ENST00000571880 MOBPQ13875 183 aa9.42□□□□□ -0.9
RAB40B-205ENST00000571880 B5MCH6 92 aa9.41□□□□□ -0.9
RAB40B-205ENST00000571880 J3QQQ9 107 aa9.41□□□□□ -0.9
RAB40B-205ENST00000571880 SPAG11AQ6PDA7 123 aa9.41□□□□□ -0.9
RAB40B-205ENST00000571880 LINC00587B1AMM8 73 aa9.39□□□□□ -0.91
RAB40B-205ENST00000571880 DPM2O94777 84 aa9.39□□□□□ -0.91
RAB40B-205ENST00000571880 LGALS3P17931 250 aaKnown RBP9.39□□□□□ -0.91
RAB40B-205ENST00000571880 PLNP26678 52 aa9.39□□□□□ -0.91
RAB40B-205ENST00000571880 LCE2AQ5TA79 106 aaPredicted RBP9.39□□□□□ -0.91
RAB40B-205ENST00000571880 Q9BRP9 147 aa9.39□□□□□ -0.91
RAB40B-205ENST00000571880 HERVK_113P61574 105 aa9.38□□□□□ -0.91
RAB40B-205ENST00000571880 S100A12P80511 92 aa9.38□□□□□ -0.91
RAB40B-205ENST00000571880 LINC00483Q53H64 154 aa9.38□□□□□ -0.91
RAB40B-205ENST00000571880 MIEN1Q9BRT3 115 aa9.38□□□□□ -0.91
RAB40B-205ENST00000571880 EIF4EBP3O60516 100 aaPredicted RBP9.37□□□□□ -0.91
RAB40B-205ENST00000571880 IGKCP01834 107 aa9.37□□□□□ -0.91
RAB40B-205ENST00000571880 SOSTDC1Q6X4U4 206 aa9.37□□□□□ -0.91
RAB40B-205ENST00000571880 SPANXB1Q9NS25 103 aaPredicted RBP9.37□□□□□ -0.91
RAB40B-205ENST00000571880 KRTAP13-3Q3SY46 172 aa9.36□□□□□ -0.91
RAB40B-205ENST00000571880 S100A7L2Q5SY68 101 aa9.36□□□□□ -0.91
RAB40B-205ENST00000571880 Q6ZRX8 168 aa9.36□□□□□ -0.91
RAB40B-205ENST00000571880 FP248Q71RG6 208 aaPredicted RBP9.36□□□□□ -0.91
RAB40B-205ENST00000571880 KRTAP9-2Q9BYQ4 174 aa9.36□□□□□ -0.91
RAB40B-205ENST00000571880 HSPB8Q9UJY1 196 aa9.36□□□□□ -0.91
RAB40B-205ENST00000571880 CTAG1AP78358 180 aa9.35□□□□□ -0.91
RAB40B-205ENST00000571880 TRBV10-2A0A0K0K1G8 114 aa9.34□□□□□ -0.91
RAB40B-205ENST00000571880 TRAV23DV6A0A075B6W5 121 aa9.33□□□□□ -0.92
RAB40B-205ENST00000571880 LOC107984156A0A0G2JMH3 177 aa9.33□□□□□ -0.92
RAB40B-205ENST00000571880 ADAMTSL4-AS1Q5T5F5 129 aa9.33□□□□□ -0.92
RAB40B-205ENST00000571880 C9orf153Q5TBE3 101 aa9.33□□□□□ -0.92
RAB40B-205ENST00000571880 ARL17AQ8IVW1 177 aa9.33□□□□□ -0.92
RAB40B-205ENST00000571880 SLC7A5P1Q8MH63 180 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms