RNA–Protein interactions for RNA: ENST00000571186.5

CIITA-205, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5

Gene CIITA, Length 1,041 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-205ENST00000571186 ERG28Q9UKR5 140 aa8.57□□□□□ -1.04
CIITA-205ENST00000571186 RPL13AP40429 203 aaKnown RBP8.56□□□□□ -1.04
CIITA-205ENST00000571186 ATP6V1G1O75348 118 aa8.55□□□□□ -1.04
CIITA-205ENST00000571186 A0A0U1RRA0 63 aa8.54□□□□□ -1.04
CIITA-205ENST00000571186 GAGE10A6NGK3 116 aa8.53□□□□□ -1.04
CIITA-205ENST00000571186 TSPAN13O95857 204 aa8.53□□□□□ -1.04
CIITA-205ENST00000571186 S100A1P23297 94 aa8.53□□□□□ -1.04
CIITA-205ENST00000571186 TSPEAR-AS2P59090 65 aa8.53□□□□□ -1.04
CIITA-205ENST00000571186 MRPL55Q7Z7F7 128 aaKnown RBP8.53□□□□□ -1.04
CIITA-205ENST00000571186 SND1-IT1Q9HBX3 110 aa8.53□□□□□ -1.04
CIITA-205ENST00000571186 RPL37AP8A6NKH3 93 aa8.52□□□□□ -1.05
CIITA-205ENST00000571186 DPM2O94777 84 aa8.52□□□□□ -1.05
CIITA-205ENST00000571186 LBHQ53QV2 105 aaPredicted RBP8.52□□□□□ -1.05
CIITA-205ENST00000571186 Q8NDZ9 215 aa8.52□□□□□ -1.05
CIITA-205ENST00000571186 LINC00167Q96N53 147 aa8.52□□□□□ -1.05
CIITA-205ENST00000571186 MAP1LC3CQ9BXW4 147 aa8.52□□□□□ -1.05
CIITA-205ENST00000571186 IGKCP01834 107 aa8.51□□□□□ -1.05
CIITA-205ENST00000571186 PLNP26678 52 aa8.51□□□□□ -1.05
CIITA-205ENST00000571186 LINC00158P58513 81 aa8.51□□□□□ -1.05
CIITA-205ENST00000571186 COX17Q14061 63 aa8.51□□□□□ -1.05
CIITA-205ENST00000571186 TP73-AS1Q9UF72 201 aa8.51□□□□□ -1.05
CIITA-205ENST00000571186 IGLV5-37A0A075B6J1 123 aa8.5□□□□□ -1.05
CIITA-205ENST00000571186 SMIM13P0DJ93 91 aa8.5□□□□□ -1.05
CIITA-205ENST00000571186 SFTA2Q6UW10 78 aa8.5□□□□□ -1.05
CIITA-205ENST00000571186 NDUFA12Q9UI09 145 aa8.5□□□□□ -1.05
CIITA-205ENST00000571186 SYS1-DBNDD2H3BUS1 97 aa8.49□□□□□ -1.05
CIITA-205ENST00000571186 LEPROTO15243 131 aa8.49□□□□□ -1.05
CIITA-205ENST00000571186 VPREB1P12018 145 aa8.49□□□□□ -1.05
CIITA-205ENST00000571186 NKAPP1Q8N9T2 125 aa8.49□□□□□ -1.05
CIITA-205ENST00000571186 ZNF861PO60384 105 aa8.48□□□□□ -1.05
CIITA-205ENST00000571186 MEIG1Q5JSS6 88 aa8.48□□□□□ -1.05
CIITA-205ENST00000571186 COA6Q5JTJ3 125 aaKnown RBP8.47□□□□□ -1.05
CIITA-205ENST00000571186 IGKV2-28A0A075B6P5 120 aa8.46□□□□□ -1.06
CIITA-205ENST00000571186 MYMXA0A1B0GTQ4 84 aa8.46□□□□□ -1.06
CIITA-205ENST00000571186 J3QQQ9 107 aa8.46□□□□□ -1.06
CIITA-205ENST00000571186 IGKV2D-28P01615 120 aa8.46□□□□□ -1.06
CIITA-205ENST00000571186 C3orf79P0CE67 100 aa8.46□□□□□ -1.06
CIITA-205ENST00000571186 HERV-K104P63124 156 aa8.46□□□□□ -1.06
CIITA-205ENST00000571186 PLEKHB2Q96CS7 222 aa8.46□□□□□ -1.06
CIITA-205ENST00000571186 HERVK_113P61574 105 aa8.45□□□□□ -1.06
CIITA-205ENST00000571186 MIR7-3HGQ8N6C7 128 aa8.45□□□□□ -1.06
CIITA-205ENST00000571186 BCE1O60756 84 aa8.44□□□□□ -1.06
CIITA-205ENST00000571186 RPL24P83731 157 aaKnown RBP8.44□□□□□ -1.06
CIITA-205ENST00000571186 LINC01545Q5VT33 79 aa8.44□□□□□ -1.06
CIITA-205ENST00000571186 DAND5Q8N907 189 aa8.44□□□□□ -1.06
CIITA-205ENST00000571186 LGALS3P17931 250 aaKnown RBP8.43□□□□□ -1.06
CIITA-205ENST00000571186 KRTDAPP60985 99 aa8.43□□□□□ -1.06
CIITA-205ENST00000571186 LCE2AQ5TA79 106 aaPredicted RBP8.43□□□□□ -1.06
CIITA-205ENST00000571186 PET117Q6UWS5 81 aa8.43□□□□□ -1.06
CIITA-205ENST00000571186 TYMSOSQ8TAI1 123 aa8.43□□□□□ -1.06
CIITA-205ENST00000571186 A0A087X002 238 aa8.42□□□□□ -1.06
CIITA-205ENST00000571186 TMEM238C9JI98 176 aa8.42□□□□□ -1.06
CIITA-205ENST00000571186 E9PLD3 99 aa8.42□□□□□ -1.06
CIITA-205ENST00000571186 NCR3O14931 201 aa8.41□□□□□ -1.06
CIITA-205ENST00000571186 CRYGAP11844 174 aa8.41□□□□□ -1.06
CIITA-205ENST00000571186 BOD1L2Q8IYS8 172 aa8.41□□□□□ -1.06
CIITA-205ENST00000571186 FAT4Q6V0I7 4981 aa8.4□□□□□ -1.06
CIITA-205ENST00000571186 KRTAP9-6A0A140TA67 174 aa8.4□□□□□ -1.06
CIITA-205ENST00000571186 RPL28P46779 137 aaKnown RBP8.4□□□□□ -1.06
CIITA-205ENST00000571186 LINC00587B1AMM8 73 aa8.39□□□□□ -1.07
CIITA-205ENST00000571186 NMUP48645 174 aa8.39□□□□□ -1.07
CIITA-205ENST00000571186 TMEM126AQ9H061 195 aa8.39□□□□□ -1.07
CIITA-205ENST00000571186 IGKV2D-26A0A0A0MRZ7 120 aa8.38□□□□□ -1.07
CIITA-205ENST00000571186 A0A0J9YXY3 114 aa8.38□□□□□ -1.07
CIITA-205ENST00000571186 M0R378 163 aa8.38□□□□□ -1.07
CIITA-205ENST00000571186 UBE2AP49459 152 aa8.38□□□□□ -1.07
CIITA-205ENST00000571186 KRTAP13-1Q8IUC0 172 aa8.38□□□□□ -1.07
CIITA-205ENST00000571186 TTTY13Q9BZ97 58 aa8.38□□□□□ -1.07
CIITA-205ENST00000571186 ANAPC11Q9NYG5 84 aa8.38□□□□□ -1.07
CIITA-205ENST00000571186 NPC2P61916 151 aa8.37□□□□□ -1.07
CIITA-205ENST00000571186 PRLHP81277 87 aa8.37□□□□□ -1.07
CIITA-205ENST00000571186 ADAMTSL4-AS1Q5T5F5 129 aa8.37□□□□□ -1.07
CIITA-205ENST00000571186 ATOH7Q8N100 152 aa8.37□□□□□ -1.07
CIITA-205ENST00000571186 RETNLBQ9BQ08 111 aa8.37□□□□□ -1.07
CIITA-205ENST00000571186 EIF4EBP3O60516 100 aaPredicted RBP8.36□□□□□ -1.07
CIITA-205ENST00000571186 FAM19A1Q7Z5A9 133 aa8.36□□□□□ -1.07
CIITA-205ENST00000571186 HIST3H2BBQ8N257 126 aa8.36□□□□□ -1.07
CIITA-205ENST00000571186 SOSTDC1Q6X4U4 206 aa8.35□□□□□ -1.07
CIITA-205ENST00000571186 CDIP1Q9H305 208 aa8.35□□□□□ -1.07
CIITA-205ENST00000571186 LOC107984156A0A0G2JMH3 177 aa8.34□□□□□ -1.07
CIITA-205ENST00000571186 ARL17AQ8IVW1 177 aa8.34□□□□□ -1.07
CIITA-205ENST00000571186 ZNF815PA8K554 130 aa8.33□□□□□ -1.08
CIITA-205ENST00000571186 ANKRD39Q53RE8 183 aa8.33□□□□□ -1.08
CIITA-205ENST00000571186 LITAFQ99732 161 aa8.33□□□□□ -1.08
CIITA-205ENST00000571186 HIST1H2BLQ99880 126 aa8.33□□□□□ -1.08
CIITA-205ENST00000571186 TRBV10-3A0A0K0K1G6 114 aa8.32□□□□□ -1.08
CIITA-205ENST00000571186 C20orf202A1L168 122 aa8.32□□□□□ -1.08
CIITA-205ENST00000571186 KRTAP13-2Q52LG2 175 aa8.32□□□□□ -1.08
CIITA-205ENST00000571186 S100A2P29034 98 aa8.31□□□□□ -1.08
CIITA-205ENST00000571186 LINC00304Q8N9R0 145 aa8.31□□□□□ -1.08
CIITA-205ENST00000571186 MIEN1Q9BRT3 115 aa8.31□□□□□ -1.08
CIITA-205ENST00000571186 IGLV7-46A0A075B6I9 117 aa8.3□□□□□ -1.08
CIITA-205ENST00000571186 PRYO14603 147 aa8.3□□□□□ -1.08
CIITA-205ENST00000571186 S100A6P06703 90 aa8.3□□□□□ -1.08
CIITA-205ENST00000571186 SNRPEP62304 92 aaKnown RBP8.29□□□□□ -1.08
CIITA-205ENST00000571186 TPRXLQ17RH7 258 aa8.29□□□□□ -1.08
CIITA-205ENST00000571186 KCNQ1DNQ9H478 68 aa8.29□□□□□ -1.08
CIITA-205ENST00000571186 TRBV10-2A0A0K0K1G8 114 aa8.28□□□□□ -1.08
CIITA-205ENST00000571186 NDUFC2O95298 119 aa8.28□□□□□ -1.08
CIITA-205ENST00000571186 DDTP30046 118 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms