RNA–Protein interactions for RNA: ENST00000570979.1

SPNS2-203, Transcript of sphingolipid transporter 2, humanhuman

TSL 1 (best)

Gene SPNS2, Length 1,768 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS2-203ENST00000570979 SND1-IT1Q9HBX3 110 aa13.38□□□□□ -0.27
SPNS2-203ENST00000570979 CSMD3Q7Z407 3707 aa13.38□□□□□ -0.27
SPNS2-203ENST00000570979 LST1O00453 97 aa13.37□□□□□ -0.27
SPNS2-203ENST00000570979 SACSQ9NZJ4 4579 aa13.36□□□□□ -0.27
SPNS2-203ENST00000570979 LYPD5Q6UWN5 251 aa13.35□□□□□ -0.27
SPNS2-203ENST00000570979 SDIM1Q6ZPB5 146 aa13.35□□□□□ -0.27
SPNS2-203ENST00000570979 LINC00643Q86TS7 51 aa13.35□□□□□ -0.27
SPNS2-203ENST00000570979 C9orf153Q5TBE3 101 aa13.35□□□□□ -0.27
SPNS2-203ENST00000570979 PRR34Q9NV39 138 aa13.35□□□□□ -0.27
SPNS2-203ENST00000570979 KLK5Q9Y337 293 aaPredicted RBP13.35□□□□□ -0.27
SPNS2-203ENST00000570979 RYR2Q92736 4967 aa13.34□□□□□ -0.27
SPNS2-203ENST00000570979 CLPSL2Q6UWE3 100 aa13.33□□□□□ -0.28
SPNS2-203ENST00000570979 RPL28P46779 137 aaKnown RBP13.32□□□□□ -0.28
SPNS2-203ENST00000570979 FAM236AA0A1B0GUQ0 79 aa13.31□□□□□ -0.28
SPNS2-203ENST00000570979 FAM236BA0A1B0GV22 79 aa13.31□□□□□ -0.28
SPNS2-203ENST00000570979 PFN2P35080 140 aa13.31□□□□□ -0.28
SPNS2-203ENST00000570979 CCL18P55774 89 aa13.31□□□□□ -0.28
SPNS2-203ENST00000570979 OR13C6PQ8NH95 151 aa13.31□□□□□ -0.28
SPNS2-203ENST00000570979 TRACP01848 142 aa13.3□□□□□ -0.28
SPNS2-203ENST00000570979 CRYGAP11844 174 aa13.3□□□□□ -0.28
SPNS2-203ENST00000570979 H0YGX0 51 aa13.29□□□□□ -0.28
SPNS2-203ENST00000570979 KIAA0087Q14695 138 aa13.29□□□□□ -0.28
SPNS2-203ENST00000570979 LYSTQ99698 3801 aa13.28□□□□□ -0.28
SPNS2-203ENST00000570979 NDUFC2O95298 119 aa13.27□□□□□ -0.28
SPNS2-203ENST00000570979 C11orf45Q8TAV5 145 aa13.27□□□□□ -0.28
SPNS2-203ENST00000570979 KLK12Q9UKR0 248 aa13.27□□□□□ -0.28
SPNS2-203ENST00000570979 COX7CP15954 63 aa13.27□□□□□ -0.29
SPNS2-203ENST00000570979 IGLV10-54A0A075B6I4 117 aa13.26□□□□□ -0.29
SPNS2-203ENST00000570979 CLEC2BQ92478 149 aa13.26□□□□□ -0.29
SPNS2-203ENST00000570979 Q6ZTC4 211 aa13.25□□□□□ -0.29
SPNS2-203ENST00000570979 LCE6AA0A183 80 aa13.25□□□□□ -0.29
SPNS2-203ENST00000570979 ATOX1O00244 68 aa13.25□□□□□ -0.29
SPNS2-203ENST00000570979 HIST1H4AP62805 103 aaKnown RBP13.25□□□□□ -0.29
SPNS2-203ENST00000570979 IGKV2-28A0A075B6P5 120 aa13.24□□□□□ -0.29
SPNS2-203ENST00000570979 IGKV2D-28P01615 120 aa13.24□□□□□ -0.29
SPNS2-203ENST00000570979 DEFB131BA0A096LNP1 70 aa13.23□□□□□ -0.29
SPNS2-203ENST00000570979 SPAG11BQ08648 103 aa13.23□□□□□ -0.29
SPNS2-203ENST00000570979 LINC00337Q8N6G1 96 aa13.23□□□□□ -0.29
SPNS2-203ENST00000570979 A0A0J9YWU9 116 aa13.22□□□□□ -0.29
SPNS2-203ENST00000570979 ENHOQ6UWT2 76 aa13.22□□□□□ -0.29
SPNS2-203ENST00000570979 GVQW2A0A096LPI5 108 aaPredicted RBP13.21□□□□□ -0.29
SPNS2-203ENST00000570979 TMEM258P61165 79 aa13.21□□□□□ -0.29
SPNS2-203ENST00000570979 FAM19A5Q7Z5A7 132 aaPredicted RBP13.21□□□□□ -0.29
SPNS2-203ENST00000570979 DNAH1Q9P2D7 4330 aa13.21□□□□□ -0.3
SPNS2-203ENST00000570979 F8WDY8 70 aa13.2□□□□□ -0.3
SPNS2-203ENST00000570979 HYDINQ4G0P3 5121 aa13.2□□□□□ -0.3
SPNS2-203ENST00000570979 Q8N3U1 123 aa13.2□□□□□ -0.3
SPNS2-203ENST00000570979 PLECQ15149 4684 aaKnown RBP13.19□□□□□ -0.3
SPNS2-203ENST00000570979 TRAV10A0A0B4J240 114 aa13.19□□□□□ -0.3
SPNS2-203ENST00000570979 GAGE2AQ6NT46 116 aa13.19□□□□□ -0.3
SPNS2-203ENST00000570979 INAFM2P0DMQ5 153 aa13.18□□□□□ -0.3
SPNS2-203ENST00000570979 SMIM11BQ8TCY0 68 aa13.18□□□□□ -0.3
SPNS2-203ENST00000570979 DNAL4O96015 105 aa13.17□□□□□ -0.3
SPNS2-203ENST00000570979 LINC01556Q5JQF7 62 aa13.17□□□□□ -0.3
SPNS2-203ENST00000570979 C2orf48Q96LS8 159 aa13.17□□□□□ -0.3
SPNS2-203ENST00000570979 NANOS2P60321 138 aaKnown RBP13.16□□□□□ -0.3
SPNS2-203ENST00000570979 ESRGQ1W209 222 aa13.15□□□□□ -0.3
SPNS2-203ENST00000570979 WFDC10BQ8IUB3 73 aa13.15□□□□□ -0.31
SPNS2-203ENST00000570979 ZNF561-AS1K7EIQ3 104 aa13.14□□□□□ -0.31
SPNS2-203ENST00000570979 BAALC-AS2P0C853 105 aa13.14□□□□□ -0.31
SPNS2-203ENST00000570979 ALMS1Q8TCU4 4167 aa13.14□□□□□ -0.31
SPNS2-203ENST00000570979 SMCR5Q8TEV8 140 aa13.12□□□□□ -0.31
SPNS2-203ENST00000570979 C1orf43Q9BWL3 253 aa13.12□□□□□ -0.31
SPNS2-203ENST00000570979 UNQ6190/PRO20217Q6UXQ8 127 aa13.11□□□□□ -0.31
SPNS2-203ENST00000570979 LOC107984640A0A0U1RRK4 108 aa13.1□□□□□ -0.31
SPNS2-203ENST00000570979 DNAH10OSP0CZ25 163 aa13.09□□□□□ -0.31
SPNS2-203ENST00000570979 RPL18AQ02543 176 aaKnown RBP13.08□□□□□ -0.32
SPNS2-203ENST00000570979 S100A7L2Q5SY68 101 aa13.08□□□□□ -0.32
SPNS2-203ENST00000570979 CAMK2N2Q96S95 79 aa13.07□□□□□ -0.32
SPNS2-203ENST00000570979 EPPK1P58107 5090 aaKnown RBP13.06□□□□□ -0.32
SPNS2-203ENST00000570979 NDUFC2-KCTD14E9PQ53 114 aa13.06□□□□□ -0.32
SPNS2-203ENST00000570979 C9orf116Q5BN46 136 aaPredicted RBP13.06□□□□□ -0.32
SPNS2-203ENST00000570979 C6orf223Q8N319 242 aa13.06□□□□□ -0.32
SPNS2-203ENST00000570979 SERP2Q8N6R1 65 aa13.06□□□□□ -0.32
SPNS2-203ENST00000570979 FAM218AQ96MZ4 157 aa13.06□□□□□ -0.32
SPNS2-203ENST00000570979 Q6JHZ5 121 aa13.05□□□□□ -0.32
SPNS2-203ENST00000570979 KRTAP26-1Q6PEX3 210 aa13.05□□□□□ -0.32
SPNS2-203ENST00000570979 RMI2Q96E14 147 aa13.05□□□□□ -0.32
SPNS2-203ENST00000570979 C10orf25Q5T742 122 aa13.04□□□□□ -0.32
SPNS2-203ENST00000570979 DPH3Q96FX2 82 aa13.04□□□□□ -0.32
SPNS2-203ENST00000570979 NUPR2A6NF83 97 aa13.04□□□□□ -0.32
SPNS2-203ENST00000570979 H3BQ85 93 aa13.03□□□□□ -0.32
SPNS2-203ENST00000570979 LINC00476Q8WZB0 136 aa13.03□□□□□ -0.32
SPNS2-203ENST00000570979 C6orf48Q9UBA6 75 aa13.03□□□□□ -0.32
SPNS2-203ENST00000570979 ORMDL1Q9P0S3 153 aa13.02□□□□□ -0.32
SPNS2-203ENST00000570979 IGKV2D-24A0A075B6R9 120 aa13.02□□□□□ -0.33
SPNS2-203ENST00000570979 UPK3BQ9BT76 320 aa13.02□□□□□ -0.33
SPNS2-203ENST00000570979 LECT2O14960 151 aa13.01□□□□□ -0.33
SPNS2-203ENST00000570979 A0A087WYN8 130 aa13□□□□□ -0.33
SPNS2-203ENST00000570979 LY6G6CO95867 125 aa12.99□□□□□ -0.33
SPNS2-203ENST00000570979 GHRHP01286 108 aa12.99□□□□□ -0.33
SPNS2-203ENST00000570979 LINC00167Q96N53 147 aa12.99□□□□□ -0.33
SPNS2-203ENST00000570979 Q9HAA7 133 aa12.99□□□□□ -0.33
SPNS2-203ENST00000570979 hADV29S1A0JD25 119 aa12.98□□□□□ -0.33
SPNS2-203ENST00000570979 IGLV6-57P01721 117 aa12.98□□□□□ -0.33
SPNS2-203ENST00000570979 NCR3O14931 201 aa12.97□□□□□ -0.33
SPNS2-203ENST00000570979 C15orf56Q8N910 161 aa12.97□□□□□ -0.33
SPNS2-203ENST00000570979 TMEM256-PLSCR3K7ERE1 68 aa12.97□□□□□ -0.33
SPNS2-203ENST00000570979 PRR3P79522 188 aaKnown RBP12.97□□□□□ -0.33
SPNS2-203ENST00000570979 Q8N814 137 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms