RNA–Protein interactions for RNA: ENST00000570758.1

CHD3-212, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 174 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-212ENST00000570758 TMEM238C9JI98 176 aa3.2□□□□□ -1.9
CHD3-212ENST00000570758 H0Y8G0 127 aa3.2□□□□□ -1.9
CHD3-212ENST00000570758 SMIM13P0DJ93 91 aa3.2□□□□□ -1.9
CHD3-212ENST00000570758 RPL13AP40429 203 aaKnown RBP3.2□□□□□ -1.9
CHD3-212ENST00000570758 UBE2AP49459 152 aa3.2□□□□□ -1.9
CHD3-212ENST00000570758 LINC00158P58513 81 aa3.2□□□□□ -1.9
CHD3-212ENST00000570758 RPL24P83731 157 aaKnown RBP3.2□□□□□ -1.9
CHD3-212ENST00000570758 SFTA2Q6UW10 78 aa3.2□□□□□ -1.9
CHD3-212ENST00000570758 LPAP08519 4548 aa3.19□□□□□ -1.9
CHD3-212ENST00000570758 M0R378 163 aa3.19□□□□□ -1.9
CHD3-212ENST00000570758 LEPROTL1O95214 131 aa3.19□□□□□ -1.9
CHD3-212ENST00000570758 TSPEAR-AS2P59090 65 aa3.19□□□□□ -1.9
CHD3-212ENST00000570758 PRLHP81277 87 aa3.19□□□□□ -1.9
CHD3-212ENST00000570758 KRTAP13-2Q52LG2 175 aa3.19□□□□□ -1.9
CHD3-212ENST00000570758 PMCHL2Q9BQD1 86 aa3.19□□□□□ -1.9
CHD3-212ENST00000570758 TMEM126AQ9H061 195 aa3.19□□□□□ -1.9
CHD3-212ENST00000570758 TSPAN13O95857 204 aa3.18□□□□□ -1.9
CHD3-212ENST00000570758 FABP4P15090 132 aa3.18□□□□□ -1.9
CHD3-212ENST00000570758 HERV-K104P63124 156 aa3.18□□□□□ -1.9
CHD3-212ENST00000570758 FAM19A1Q7Z5A9 133 aa3.18□□□□□ -1.9
CHD3-212ENST00000570758 MIR7-3HGQ8N6C7 128 aa3.18□□□□□ -1.9
CHD3-212ENST00000570758 NDUFA12Q9UI09 145 aa3.18□□□□□ -1.9
CHD3-212ENST00000570758 RNF213Q63HN8 5207 aa3.17□□□□□ -1.9
CHD3-212ENST00000570758 MYMXA0A1B0GTQ4 84 aa3.17□□□□□ -1.9
CHD3-212ENST00000570758 NCR3O14931 201 aa3.17□□□□□ -1.9
CHD3-212ENST00000570758 LEPROTO15243 131 aa3.17□□□□□ -1.9
CHD3-212ENST00000570758 CRYGAP11844 174 aa3.17□□□□□ -1.9
CHD3-212ENST00000570758 MEIG1Q5JSS6 88 aa3.17□□□□□ -1.9
CHD3-212ENST00000570758 BOD1L2Q8IYS8 172 aa3.17□□□□□ -1.9
CHD3-212ENST00000570758 TYMSOSQ8TAI1 123 aa3.17□□□□□ -1.9
CHD3-212ENST00000570758 HSPB8Q9UJY1 196 aa3.17□□□□□ -1.9
CHD3-212ENST00000570758 ATP6V1G1O75348 118 aa3.16□□□□□ -1.9
CHD3-212ENST00000570758 DPM2O94777 84 aa3.16□□□□□ -1.9
CHD3-212ENST00000570758 PLNP26678 52 aa3.16□□□□□ -1.9
CHD3-212ENST00000570758 PRR4Q16378 134 aa3.16□□□□□ -1.9
CHD3-212ENST00000570758 FAM229BQ4G0N7 80 aa3.16□□□□□ -1.9
CHD3-212ENST00000570758 DAND5Q8N907 189 aa3.16□□□□□ -1.9
CHD3-212ENST00000570758 PLEKHB2Q96CS7 222 aa3.16□□□□□ -1.9
CHD3-212ENST00000570758 TRBV10-3A0A0K0K1G6 114 aa3.15□□□□□ -1.91
CHD3-212ENST00000570758 LINC00587B1AMM8 73 aa3.15□□□□□ -1.91
CHD3-212ENST00000570758 J3QQQ9 107 aa3.15□□□□□ -1.91
CHD3-212ENST00000570758 PRYO14603 147 aa3.15□□□□□ -1.91
CHD3-212ENST00000570758 HIST1H2BKO60814 126 aa3.15□□□□□ -1.91
CHD3-212ENST00000570758 IGKCP01834 107 aa3.15□□□□□ -1.91
CHD3-212ENST00000570758 HIST1H2BJP06899 126 aa3.15□□□□□ -1.91
CHD3-212ENST00000570758 HIST1H2BOP23527 126 aa3.15□□□□□ -1.91
CHD3-212ENST00000570758 HIST1H2BBP33778 126 aa3.15□□□□□ -1.91
CHD3-212ENST00000570758 SPRR1AP35321 89 aa3.15□□□□□ -1.91
CHD3-212ENST00000570758 HIST1H2BDP58876 126 aa3.15□□□□□ -1.91
CHD3-212ENST00000570758 HERVK_113P61574 105 aa3.15□□□□□ -1.91
CHD3-212ENST00000570758 HIST1H2BCP62807 126 aa3.15□□□□□ -1.91
CHD3-212ENST00000570758 HIST2H2BEQ16778 126 aa3.15□□□□□ -1.91
CHD3-212ENST00000570758 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.15□□□□□ -1.91
CHD3-212ENST00000570758 C3orf22Q8N5N4 141 aa3.15□□□□□ -1.91
CHD3-212ENST00000570758 HIST1H2BHQ93079 126 aa3.15□□□□□ -1.91
CHD3-212ENST00000570758 HIST1H2BNQ99877 126 aa3.15□□□□□ -1.91
CHD3-212ENST00000570758 HIST1H2BMQ99879 126 aa3.15□□□□□ -1.91
CHD3-212ENST00000570758 HIGD2AQ9BW72 106 aa3.15□□□□□ -1.91
CHD3-212ENST00000570758 IGKV2D-26A0A0A0MRZ7 120 aa3.14□□□□□ -1.91
CHD3-212ENST00000570758 LOC107984156A0A0G2JMH3 177 aa3.14□□□□□ -1.91
CHD3-212ENST00000570758 KRTAP4-16G5E9R7 235 aaPredicted RBP3.14□□□□□ -1.91
CHD3-212ENST00000570758 EIF4EBP3O60516 100 aaPredicted RBP3.14□□□□□ -1.91
CHD3-212ENST00000570758 LGALS3P17931 250 aaKnown RBP3.14□□□□□ -1.91
CHD3-212ENST00000570758 SOSTDC1Q6X4U4 206 aa3.14□□□□□ -1.91
CHD3-212ENST00000570758 ARL17AQ8IVW1 177 aa3.14□□□□□ -1.91
CHD3-212ENST00000570758 LINC00337Q8N6G1 96 aa3.14□□□□□ -1.91
CHD3-212ENST00000570758 LINC00304Q8N9R0 145 aa3.14□□□□□ -1.91
CHD3-212ENST00000570758 SMCR5Q8TEV8 140 aa3.14□□□□□ -1.91
CHD3-212ENST00000570758 SPRR4Q96PI1 79 aa3.14□□□□□ -1.91
CHD3-212ENST00000570758 MAP1LC3CQ9BXW4 147 aa3.14□□□□□ -1.91
CHD3-212ENST00000570758 KCNQ1DNQ9H478 68 aa3.14□□□□□ -1.91
CHD3-212ENST00000570758 A0A0J9YXY3 114 aa3.13□□□□□ -1.91
CHD3-212ENST00000570758 E9PLD3 99 aa3.13□□□□□ -1.91
CHD3-212ENST00000570758 SYS1-DBNDD2H3BUS1 97 aa3.13□□□□□ -1.91
CHD3-212ENST00000570758 NMUP48645 174 aa3.13□□□□□ -1.91
CHD3-212ENST00000570758 ADAMTSL4-AS1Q5T5F5 129 aa3.13□□□□□ -1.91
CHD3-212ENST00000570758 RETNLBQ9BQ08 111 aa3.13□□□□□ -1.91
CHD3-212ENST00000570758 TRBV10-2A0A0K0K1G8 114 aa3.12□□□□□ -1.91
CHD3-212ENST00000570758 ETDCA0A1B0GVM5 59 aa3.12□□□□□ -1.91
CHD3-212ENST00000570758 B5MCH6 92 aa3.12□□□□□ -1.91
CHD3-212ENST00000570758 ERC2-IT1O76042 136 aa3.12□□□□□ -1.91
CHD3-212ENST00000570758 DDTP30046 118 aa3.12□□□□□ -1.91
CHD3-212ENST00000570758 NPC2P61916 151 aa3.12□□□□□ -1.91
CHD3-212ENST00000570758 LINC01545Q5VT33 79 aa3.12□□□□□ -1.91
CHD3-212ENST00000570758 PPDPFQ9H3Y8 114 aa3.12□□□□□ -1.91
CHD3-212ENST00000570758 SPANXB1Q9NS25 103 aaPredicted RBP3.12□□□□□ -1.91
CHD3-212ENST00000570758 MUC17Q685J3 4493 aa3.11□□□□□ -1.91
CHD3-212ENST00000570758 NDUFC2O95298 119 aa3.11□□□□□ -1.91
CHD3-212ENST00000570758 IGLV6-57P01721 117 aa3.11□□□□□ -1.91
CHD3-212ENST00000570758 C3orf79P0CE67 100 aa3.11□□□□□ -1.91
CHD3-212ENST00000570758 COA6Q5JTJ3 125 aaKnown RBP3.11□□□□□ -1.91
CHD3-212ENST00000570758 PET117Q6UWS5 81 aa3.11□□□□□ -1.91
CHD3-212ENST00000570758 LITAFQ99732 161 aa3.11□□□□□ -1.91
CHD3-212ENST00000570758 Q9BRP9 147 aa3.11□□□□□ -1.91
CHD3-212ENST00000570758 MIEN1Q9BRT3 115 aa3.11□□□□□ -1.91
CHD3-212ENST00000570758 TTTY13Q9BZ97 58 aa3.11□□□□□ -1.91
CHD3-212ENST00000570758 ZNF706Q9Y5V0 76 aaPredicted RBP3.11□□□□□ -1.91
CHD3-212ENST00000570758 TRAV23DV6A0A075B6W5 121 aa3.1□□□□□ -1.91
CHD3-212ENST00000570758 TIMM17BO60830 172 aa3.1□□□□□ -1.91
CHD3-212ENST00000570758 LINC00483Q53H64 154 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms