RNA–Protein interactions for RNA: ENST00000570451.5

RPA1-202, Transcript of replication protein A1, humanhuman

TSL 3

Gene RPA1, Length 630 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-202ENST00000570451 UBE2AP49459 152 aa12.47□□□□□ -0.41
RPA1-202ENST00000570451 IGKV2-28A0A075B6P5 120 aa12.46□□□□□ -0.41
RPA1-202ENST00000570451 A0A087X002 238 aa12.46□□□□□ -0.41
RPA1-202ENST00000570451 IGKV2D-28P01615 120 aa12.46□□□□□ -0.41
RPA1-202ENST00000570451 TMA7Q9Y2S6 64 aaKnown RBP12.46□□□□□ -0.41
RPA1-202ENST00000570451 IGLV5-39A0A0G2JS06 123 aa12.45□□□□□ -0.42
RPA1-202ENST00000570451 LEPROTL1O95214 131 aa12.45□□□□□ -0.42
RPA1-202ENST00000570451 CRYGAP11844 174 aa12.45□□□□□ -0.42
RPA1-202ENST00000570451 ZNF22P17026 224 aaPredicted RBP12.45□□□□□ -0.42
RPA1-202ENST00000570451 FABP4P15090 132 aa12.44□□□□□ -0.42
RPA1-202ENST00000570451 TYMSOSQ8TAI1 123 aa12.44□□□□□ -0.42
RPA1-202ENST00000570451 HSPB8Q9UJY1 196 aa12.44□□□□□ -0.42
RPA1-202ENST00000570451 IFI27L1Q96BM0 104 aa12.43□□□□□ -0.42
RPA1-202ENST00000570451 ANAPC11Q9NYG5 84 aa12.43□□□□□ -0.42
RPA1-202ENST00000570451 ZNF625Q96I27 306 aaPredicted RBP12.42□□□□□ -0.42
RPA1-202ENST00000570451 ERG28Q9UKR5 140 aa12.42□□□□□ -0.42
RPA1-202ENST00000570451 S100A2P29034 98 aa12.41□□□□□ -0.42
RPA1-202ENST00000570451 SNRPEP62304 92 aaKnown RBP12.41□□□□□ -0.42
RPA1-202ENST00000570451 SND1-IT1Q9HBX3 110 aa12.41□□□□□ -0.42
RPA1-202ENST00000570451 TMEM170BQ5T4T1 132 aa12.4□□□□□ -0.42
RPA1-202ENST00000570451 HIST3H2BBQ8N257 126 aa12.4□□□□□ -0.42
RPA1-202ENST00000570451 KRTAP13-1Q8IUC0 172 aa12.39□□□□□ -0.43
RPA1-202ENST00000570451 C11orf86A6NJI1 115 aa12.38□□□□□ -0.43
RPA1-202ENST00000570451 VPREB1P12018 145 aa12.38□□□□□ -0.43
RPA1-202ENST00000570451 C5orf52A6NGY3 159 aa12.37□□□□□ -0.43
RPA1-202ENST00000570451 H0Y8G0 127 aa12.37□□□□□ -0.43
RPA1-202ENST00000570451 RPL24P83731 157 aaKnown RBP12.37□□□□□ -0.43
RPA1-202ENST00000570451 COX17Q14061 63 aa12.37□□□□□ -0.43
RPA1-202ENST00000570451 MAP1LC3CQ9BXW4 147 aa12.37□□□□□ -0.43
RPA1-202ENST00000570451 TMEM238C9JI98 176 aa12.36□□□□□ -0.43
RPA1-202ENST00000570451 PRLHP81277 87 aa12.36□□□□□ -0.43
RPA1-202ENST00000570451 FAM19A1Q7Z5A9 133 aa12.36□□□□□ -0.43
RPA1-202ENST00000570451 MUC2Q02817 5179 aa12.35□□□□□ -0.43
RPA1-202ENST00000570451 HIST1H2BLQ99880 126 aa12.35□□□□□ -0.43
RPA1-202ENST00000570451 TMEM126AQ9H061 195 aa12.35□□□□□ -0.43
RPA1-202ENST00000570451 KRTAP13-2Q52LG2 175 aa12.34□□□□□ -0.43
RPA1-202ENST00000570451 CHTOPQ9Y3Y2 248 aaKnown RBP12.34□□□□□ -0.43
RPA1-202ENST00000570451 TRAV12-1A0A0B4J245 112 aa12.33□□□□□ -0.44
RPA1-202ENST00000570451 SFTA2Q6UW10 78 aa12.33□□□□□ -0.44
RPA1-202ENST00000570451 KRTDAPP60985 99 aa12.32□□□□□ -0.44
RPA1-202ENST00000570451 FAM229BQ4G0N7 80 aa12.32□□□□□ -0.44
RPA1-202ENST00000570451 Q8NDZ9 215 aa12.32□□□□□ -0.44
RPA1-202ENST00000570451 SYS1-DBNDD2H3BUS1 97 aa12.31□□□□□ -0.44
RPA1-202ENST00000570451 LINC00158P58513 81 aa12.31□□□□□ -0.44
RPA1-202ENST00000570451 IGKV2D-26A0A0A0MRZ7 120 aa12.3□□□□□ -0.44
RPA1-202ENST00000570451 A0A0U1RRA0 63 aa12.3□□□□□ -0.44
RPA1-202ENST00000570451 M0R378 163 aa12.3□□□□□ -0.44
RPA1-202ENST00000570451 C3orf79P0CE67 100 aa12.29□□□□□ -0.44
RPA1-202ENST00000570451 LINC00304Q8N9R0 145 aa12.29□□□□□ -0.44
RPA1-202ENST00000570451 PET117Q6UWS5 81 aa12.28□□□□□ -0.44
RPA1-202ENST00000570451 RETNLBQ9BQ08 111 aa12.27□□□□□ -0.45
RPA1-202ENST00000570451 TMEM223A0PJW6 202 aa12.26□□□□□ -0.45
RPA1-202ENST00000570451 C20orf202A1L168 122 aa12.26□□□□□ -0.45
RPA1-202ENST00000570451 PMCHL2Q9BQD1 86 aa12.26□□□□□ -0.45
RPA1-202ENST00000570451 HIGD2AQ9BW72 106 aa12.25□□□□□ -0.45
RPA1-202ENST00000570451 DPM2O94777 84 aa12.24□□□□□ -0.45
RPA1-202ENST00000570451 PLNP26678 52 aa12.24□□□□□ -0.45
RPA1-202ENST00000570451 LINC01545Q5VT33 79 aa12.24□□□□□ -0.45
RPA1-202ENST00000570451 SMIM13P0DJ93 91 aa12.23□□□□□ -0.45
RPA1-202ENST00000570451 MEIG1Q5JSS6 88 aa12.23□□□□□ -0.45
RPA1-202ENST00000570451 PLEKHB2Q96CS7 222 aa12.23□□□□□ -0.45
RPA1-202ENST00000570451 IGKCP01834 107 aa12.21□□□□□ -0.45
RPA1-202ENST00000570451 BOD1L2Q8IYS8 172 aa12.2□□□□□ -0.46
RPA1-202ENST00000570451 C3orf22Q8N5N4 141 aa12.2□□□□□ -0.46
RPA1-202ENST00000570451 NCR3O14931 201 aa12.19□□□□□ -0.46
RPA1-202ENST00000570451 AKR1D1P51857 326 aa12.17□□□□□ -0.46
RPA1-202ENST00000570451 MIR7-3HGQ8N6C7 128 aa12.17□□□□□ -0.46
RPA1-202ENST00000570451 SCGB1D1O95968 90 aa12.16□□□□□ -0.46
RPA1-202ENST00000570451 HERV-K104P63124 156 aa12.16□□□□□ -0.46
RPA1-202ENST00000570451 PRYO14603 147 aa12.15□□□□□ -0.46
RPA1-202ENST00000570451 SPRR4Q96PI1 79 aa12.15□□□□□ -0.46
RPA1-202ENST00000570451 NDUFA12Q9UI09 145 aa12.15□□□□□ -0.46
RPA1-202ENST00000570451 A0A0U1RQV1 116 aa12.14□□□□□ -0.47
RPA1-202ENST00000570451 HERVK_113P61574 105 aa12.14□□□□□ -0.47
RPA1-202ENST00000570451 ZNF706Q9Y5V0 76 aaPredicted RBP12.14□□□□□ -0.47
RPA1-202ENST00000570451 MYMXA0A1B0GTQ4 84 aa12.13□□□□□ -0.47
RPA1-202ENST00000570451 ATOH7Q8N100 152 aa12.13□□□□□ -0.47
RPA1-202ENST00000570451 IGLV7-46A0A075B6I9 117 aa12.12□□□□□ -0.47
RPA1-202ENST00000570451 ETDCA0A1B0GVM5 59 aa12.11□□□□□ -0.47
RPA1-202ENST00000570451 LINC00587B1AMM8 73 aa12.11□□□□□ -0.47
RPA1-202ENST00000570451 CDIP1Q9H305 208 aa12.11□□□□□ -0.47
RPA1-202ENST00000570451 TRBV10-3A0A0K0K1G6 114 aa12.09□□□□□ -0.47
RPA1-202ENST00000570451 CTAG1AP78358 180 aa12.09□□□□□ -0.47
RPA1-202ENST00000570451 LINC00337Q8N6G1 96 aa12.09□□□□□ -0.47
RPA1-202ENST00000570451 PPDPFQ9H3Y8 114 aa12.09□□□□□ -0.47
RPA1-202ENST00000570451 KCNQ1DNQ9H478 68 aa12.09□□□□□ -0.47
RPA1-202ENST00000570451 TSPEAR-AS2P59090 65 aa12.08□□□□□ -0.48
RPA1-202ENST00000570451 JOSD1Q15040 202 aaPredicted RBP12.08□□□□□ -0.48
RPA1-202ENST00000570451 TPRXLQ17RH7 258 aa12.08□□□□□ -0.48
RPA1-202ENST00000570451 DAND5Q8N907 189 aa12.08□□□□□ -0.48
RPA1-202ENST00000570451 SMCR5Q8TEV8 140 aa12.08□□□□□ -0.48
RPA1-202ENST00000570451 SPRR1AP35321 89 aa12.07□□□□□ -0.48
RPA1-202ENST00000570451 S100A12P80511 92 aa12.07□□□□□ -0.48
RPA1-202ENST00000570451 C4orf48Q5BLP8 95 aa12.07□□□□□ -0.48
RPA1-202ENST00000570451 SPAG11AQ6PDA7 123 aa12.07□□□□□ -0.48
RPA1-202ENST00000570451 MUC17Q685J3 4493 aa12.07□□□□□ -0.48
RPA1-202ENST00000570451 HSBP1L1C9JCN9 74 aa12.06□□□□□ -0.48
RPA1-202ENST00000570451 LEPROTO15243 131 aa12.06□□□□□ -0.48
RPA1-202ENST00000570451 E9PLD3 99 aa12.05□□□□□ -0.48
RPA1-202ENST00000570451 KRTAP4-16G5E9R7 235 aaPredicted RBP12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms