RNA–Protein interactions for RNA: ENST00000570280.5

RHOT2-226, Transcript of ras homolog family member T2, human

TSL 3

Gene RHOT2, Length 708 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RHOT2-226	ENST00000570280	SMCO4	Q9NRQ5	59 aa		11.67	□□□□□ -0.54
RHOT2-226	ENST00000570280	C4orf48	Q5BLP8	95 aa		11.66	□□□□□ -0.54
RHOT2-226	ENST00000570280	LCE2D	Q5TA82	110 aa	Predicted RBP	11.66	□□□□□ -0.54
RHOT2-226	ENST00000570280	SFTA2	Q6UW10	78 aa		11.65	□□□□□ -0.54
RHOT2-226	ENST00000570280	DAND5	Q8N907	189 aa		11.65	□□□□□ -0.54
RHOT2-226	ENST00000570280		Q8NBF4	154 aa		11.65	□□□□□ -0.54
RHOT2-226	ENST00000570280	ZNF706	Q9Y5V0	76 aa	Predicted RBP	11.65	□□□□□ -0.54
RHOT2-226	ENST00000570280	NDUFA6	P56556	154 aa		11.64	□□□□□ -0.55
RHOT2-226	ENST00000570280	LINC01547	P58512	204 aa	Predicted RBP	11.64	□□□□□ -0.55
RHOT2-226	ENST00000570280	C11orf86	A6NJI1	115 aa		11.62	□□□□□ -0.55
RHOT2-226	ENST00000570280	URB1-AS1	Q96HZ7	61 aa		11.62	□□□□□ -0.55
RHOT2-226	ENST00000570280	SPINK1	P00995	79 aa		11.61	□□□□□ -0.55
RHOT2-226	ENST00000570280	COX19	Q49B96	90 aa		11.61	□□□□□ -0.55
RHOT2-226	ENST00000570280	S100P	P25815	95 aa		11.6	□□□□□ -0.55
RHOT2-226	ENST00000570280	SPRR1A	P35321	89 aa		11.6	□□□□□ -0.55
RHOT2-226	ENST00000570280	FABP9	Q0Z7S8	132 aa		11.6	□□□□□ -0.55
RHOT2-226	ENST00000570280	TMEM218	A2RU14	115 aa		11.59	□□□□□ -0.55
RHOT2-226	ENST00000570280	PRY	O14603	147 aa		11.59	□□□□□ -0.55
RHOT2-226	ENST00000570280	LINC00158	P58513	81 aa		11.59	□□□□□ -0.55
RHOT2-226	ENST00000570280	SEC61B	P60468	96 aa	Known RBP	11.59	□□□□□ -0.55
RHOT2-226	ENST00000570280	KRTAP4-16	G5E9R7	235 aa	Predicted RBP	11.58	□□□□□ -0.56
RHOT2-226	ENST00000570280	LINC00483	Q53H64	154 aa		11.58	□□□□□ -0.56
RHOT2-226	ENST00000570280	CLLU1	Q5K131	121 aa		11.58	□□□□□ -0.56
RHOT2-226	ENST00000570280	TMEM170B	Q5T4T1	132 aa		11.58	□□□□□ -0.56
RHOT2-226	ENST00000570280	SMCR5	Q8TEV8	140 aa		11.58	□□□□□ -0.56
RHOT2-226	ENST00000570280	HBD	P02042	147 aa		11.57	□□□□□ -0.56
RHOT2-226	ENST00000570280	KCNQ1DN	Q9H478	68 aa		11.57	□□□□□ -0.56
RHOT2-226	ENST00000570280	FSIP2	Q5CZC0	6907 aa		11.56	□□□□□ -0.56
RHOT2-226	ENST00000570280	LINC00614	P0C842	121 aa		11.56	□□□□□ -0.56
RHOT2-226	ENST00000570280	UQCC3	Q6UW78	93 aa		11.56	□□□□□ -0.56
RHOT2-226	ENST00000570280	BAGE3	Q86Y29	109 aa		11.56	□□□□□ -0.56
RHOT2-226	ENST00000570280		A0A0U1RRA0	63 aa		11.55	□□□□□ -0.56
RHOT2-226	ENST00000570280	PMCHL1	Q16048	86 aa		11.54	□□□□□ -0.56
RHOT2-226	ENST00000570280	C18orf32	Q8TCD1	76 aa		11.54	□□□□□ -0.56
RHOT2-226	ENST00000570280	RPS29	P62273	56 aa	Known RBP	11.53	□□□□□ -0.56
RHOT2-226	ENST00000570280	BOD1L2	Q8IYS8	172 aa		11.52	□□□□□ -0.57
RHOT2-226	ENST00000570280		Q8N377	158 aa		11.52	□□□□□ -0.57
RHOT2-226	ENST00000570280	SEC11C	Q9BY50	192 aa		11.52	□□□□□ -0.57
RHOT2-226	ENST00000570280	TMEM223	A0PJW6	202 aa		11.51	□□□□□ -0.57
RHOT2-226	ENST00000570280	NCR3	O14931	201 aa		11.51	□□□□□ -0.57
RHOT2-226	ENST00000570280	SMIM13	P0DJ93	91 aa		11.51	□□□□□ -0.57
RHOT2-226	ENST00000570280	CRCT1	Q9UGL9	99 aa		11.51	□□□□□ -0.57
RHOT2-226	ENST00000570280	ETDC	A0A1B0GVM5	59 aa		11.5	□□□□□ -0.57
RHOT2-226	ENST00000570280	CHTOP	Q9Y3Y2	248 aa	Known RBP	11.5	□□□□□ -0.57
RHOT2-226	ENST00000570280	XP32	Q5T750	250 aa		11.49	□□□□□ -0.57
RHOT2-226	ENST00000570280	NDUFA12	Q9UI09	145 aa		11.49	□□□□□ -0.57
RHOT2-226	ENST00000570280	TRBV10-3	A0A0K0K1G6	114 aa		11.48	□□□□□ -0.57
RHOT2-226	ENST00000570280	MOBP	Q13875	183 aa		11.48	□□□□□ -0.57
RHOT2-226	ENST00000570280	LCE2C	Q5TA81	110 aa		11.48	□□□□□ -0.57
RHOT2-226	ENST00000570280	GAGE2A	Q6NT46	116 aa		11.48	□□□□□ -0.57
RHOT2-226	ENST00000570280	SSBP3-AS1	Q7Z2R9	100 aa		11.48	□□□□□ -0.57
RHOT2-226	ENST00000570280	FAM19A2	Q8N3H0	131 aa		11.48	□□□□□ -0.57
RHOT2-226	ENST00000570280	MIR7-3HG	Q8N6C7	128 aa		11.48	□□□□□ -0.57
RHOT2-226	ENST00000570280		B5MCH6	92 aa		11.46	□□□□□ -0.57
RHOT2-226	ENST00000570280	ATP6V1G1	O75348	118 aa		11.46	□□□□□ -0.57
RHOT2-226	ENST00000570280	ERC2-IT1	O76042	136 aa		11.46	□□□□□ -0.57
RHOT2-226	ENST00000570280	MEIG1	Q5JSS6	88 aa		11.45	□□□□□ -0.58
RHOT2-226	ENST00000570280	TRAPPC1	Q9Y5R8	145 aa		11.45	□□□□□ -0.58
RHOT2-226	ENST00000570280	IGLV9-49	A0A0B4J1Y8	123 aa		11.44	□□□□□ -0.58
RHOT2-226	ENST00000570280	TRAV12-1	A0A0B4J245	112 aa		11.44	□□□□□ -0.58
RHOT2-226	ENST00000570280	SLC25A20	O43772	301 aa		11.44	□□□□□ -0.58
RHOT2-226	ENST00000570280	HERV-K104	P63124	156 aa		11.43	□□□□□ -0.58
RHOT2-226	ENST00000570280	RHEB	Q15382	184 aa		11.42	□□□□□ -0.58
RHOT2-226	ENST00000570280	C10orf91	Q5T1B1	145 aa		11.42	□□□□□ -0.58
RHOT2-226	ENST00000570280		Q9BRP9	147 aa		11.42	□□□□□ -0.58
RHOT2-226	ENST00000570280	KRTAP19-2	Q3LHN2	52 aa		11.41	□□□□□ -0.58
RHOT2-226	ENST00000570280	RPS10P5	Q9NQ39	176 aa		11.41	□□□□□ -0.58
RHOT2-226	ENST00000570280	LINC00587	B1AMM8	73 aa		11.4	□□□□□ -0.58
RHOT2-226	ENST00000570280	LOC107984156	A0A0G2JMH3	177 aa		11.39	□□□□□ -0.59
RHOT2-226	ENST00000570280	ARL17A	Q8IVW1	177 aa		11.39	□□□□□ -0.59
RHOT2-226	ENST00000570280	S100A12	P80511	92 aa		11.38	□□□□□ -0.59
RHOT2-226	ENST00000570280	IFITM2	Q01629	132 aa		11.38	□□□□□ -0.59
RHOT2-226	ENST00000570280	IFI27L1	Q96BM0	104 aa		11.38	□□□□□ -0.59
RHOT2-226	ENST00000570280		Q6ZRX8	168 aa		11.37	□□□□□ -0.59
RHOT2-226	ENST00000570280	TRBV10-2	A0A0K0K1G8	114 aa		11.36	□□□□□ -0.59
RHOT2-226	ENST00000570280	DDT	P30046	118 aa		11.36	□□□□□ -0.59
RHOT2-226	ENST00000570280	MAP1LC3C	Q9BXW4	147 aa		11.36	□□□□□ -0.59
RHOT2-226	ENST00000570280	MYMX	A0A1B0GTQ4	84 aa		11.35	□□□□□ -0.59
RHOT2-226	ENST00000570280	MT1H	P80294	61 aa		11.34	□□□□□ -0.59
RHOT2-226	ENST00000570280	COMMD7	Q86VX2	200 aa		11.33	□□□□□ -0.6
RHOT2-226	ENST00000570280	CHCHD1	Q96BP2	118 aa	Known RBP	11.33	□□□□□ -0.6
RHOT2-226	ENST00000570280	TSPEAR-AS2	P59090	65 aa		11.32	□□□□□ -0.6
RHOT2-226	ENST00000570280	IGLV6-57	P01721	117 aa		11.3	□□□□□ -0.6
RHOT2-226	ENST00000570280	C9orf153	Q5TBE3	101 aa		11.3	□□□□□ -0.6
RHOT2-226	ENST00000570280	SPANXB1	Q9NS25	103 aa	Predicted RBP	11.3	□□□□□ -0.6
RHOT2-226	ENST00000570280	JOSD1	Q15040	202 aa	Predicted RBP	11.27	□□□□□ -0.61
RHOT2-226	ENST00000570280	LEPROT	O15243	131 aa		11.26	□□□□□ -0.61
RHOT2-226	ENST00000570280	NDUFC2	O95298	119 aa		11.26	□□□□□ -0.61
RHOT2-226	ENST00000570280	PCOTH	Q58A44	107 aa		11.26	□□□□□ -0.61
RHOT2-226	ENST00000570280	ST20-AS1	Q8NBB2	130 aa		11.26	□□□□□ -0.61
RHOT2-226	ENST00000570280	TRAV23DV6	A0A075B6W5	121 aa		11.25	□□□□□ -0.61
RHOT2-226	ENST00000570280	CFC1B	P0CG36	223 aa		11.25	□□□□□ -0.61
RHOT2-226	ENST00000570280	S100A7L2	Q5SY68	101 aa		11.24	□□□□□ -0.61
RHOT2-226	ENST00000570280	IGLV8-61	A0A075B6I0	122 aa		11.23	□□□□□ -0.61
RHOT2-226	ENST00000570280	C5orf52	A6NGY3	159 aa		11.23	□□□□□ -0.61
RHOT2-226	ENST00000570280	ZNF73	O43830	326 aa	Predicted RBP	11.22	□□□□□ -0.61
RHOT2-226	ENST00000570280	LOR	P23490	312 aa	Predicted RBP	11.22	□□□□□ -0.61
RHOT2-226	ENST00000570280	YPEL4	Q96NS1	127 aa		11.22	□□□□□ -0.61
RHOT2-226	ENST00000570280	MIEN1	Q9BRT3	115 aa		11.22	□□□□□ -0.61
RHOT2-226	ENST00000570280		J3QQQ9	107 aa		11.21	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms