RNA–Protein interactions for RNA: ENST00000570273.5

HERPUD1-219, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 1,425 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-219ENST00000570273 EIF4EBP3O60516 100 aaPredicted RBP9.89□□□□□ -0.83
HERPUD1-219ENST00000570273 SDIM1Q6ZPB5 146 aa9.89□□□□□ -0.83
HERPUD1-219ENST00000570273 CEND1Q8N111 149 aa9.89□□□□□ -0.83
HERPUD1-219ENST00000570273 PKD1P98161 4303 aa9.88□□□□□ -0.83
HERPUD1-219ENST00000570273 A0A1B0GVY2 172 aa9.88□□□□□ -0.83
HERPUD1-219ENST00000570273 C9orf129Q5T035 196 aaKnown RBP9.88□□□□□ -0.83
HERPUD1-219ENST00000570273 DNAH11Q96DT5 4516 aa9.87□□□□□ -0.83
HERPUD1-219ENST00000570273 CHTF8P0CG12 524 aa9.87□□□□□ -0.83
HERPUD1-219ENST00000570273 RPL24P83731 157 aaKnown RBP9.87□□□□□ -0.83
HERPUD1-219ENST00000570273 M0R143 59 aa9.86□□□□□ -0.83
HERPUD1-219ENST00000570273 HINT1P49773 126 aaPredicted RBP9.86□□□□□ -0.83
HERPUD1-219ENST00000570273 LOC107984156A0A0G2JMH3 177 aa9.85□□□□□ -0.83
HERPUD1-219ENST00000570273 FXYD2P54710 66 aa9.85□□□□□ -0.83
HERPUD1-219ENST00000570273 ARL17AQ8IVW1 177 aa9.85□□□□□ -0.83
HERPUD1-219ENST00000570273 PPDPFQ9H3Y8 114 aa9.85□□□□□ -0.83
HERPUD1-219ENST00000570273 A4D1N5 150 aa9.84□□□□□ -0.83
HERPUD1-219ENST00000570273 LINC00474Q9P2X8 69 aa9.84□□□□□ -0.83
HERPUD1-219ENST00000570273 TMEM238LA0A1B0GVL6 79 aa9.83□□□□□ -0.84
HERPUD1-219ENST00000570273 A6NJY4 79 aa9.83□□□□□ -0.84
HERPUD1-219ENST00000570273 BVES-AS1Q5T3Y7 98 aa9.83□□□□□ -0.84
HERPUD1-219ENST00000570273 FAM19A5Q7Z5A7 132 aaPredicted RBP9.82□□□□□ -0.84
HERPUD1-219ENST00000570273 Q8NDZ9 215 aa9.82□□□□□ -0.84
HERPUD1-219ENST00000570273 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.82□□□□□ -0.84
HERPUD1-219ENST00000570273 FAM168BA1KXE4 195 aa9.82□□□□□ -0.84
HERPUD1-219ENST00000570273 PANO1I0J062 215 aa9.82□□□□□ -0.84
HERPUD1-219ENST00000570273 KRTAP10-1P60331 282 aa9.82□□□□□ -0.84
HERPUD1-219ENST00000570273 BATFQ16520 125 aa9.82□□□□□ -0.84
HERPUD1-219ENST00000570273 SERTAD4-AS1Q5TG53 156 aa9.82□□□□□ -0.84
HERPUD1-219ENST00000570273 SPACA4Q8TDM5 124 aa9.82□□□□□ -0.84
HERPUD1-219ENST00000570273 PKHD1P08F94 4074 aa9.81□□□□□ -0.84
HERPUD1-219ENST00000570273 NCR3O14931 201 aa9.81□□□□□ -0.84
HERPUD1-219ENST00000570273 NDUFC2O95298 119 aa9.81□□□□□ -0.84
HERPUD1-219ENST00000570273 VPREB1P12018 145 aa9.81□□□□□ -0.84
HERPUD1-219ENST00000570273 DPH3Q96FX2 82 aa9.81□□□□□ -0.84
HERPUD1-219ENST00000570273 PLA2G2DQ9UNK4 145 aa9.81□□□□□ -0.84
HERPUD1-219ENST00000570273 NKAPP1Q8N9T2 125 aa9.8□□□□□ -0.84
HERPUD1-219ENST00000570273 NHP2Q9NX24 153 aaKnown RBP9.8□□□□□ -0.84
HERPUD1-219ENST00000570273 PRR3P79522 188 aaKnown RBP9.79□□□□□ -0.84
HERPUD1-219ENST00000570273 DNAH5Q8TE73 4624 aa9.78□□□□□ -0.84
HERPUD1-219ENST00000570273 A0A1W2PNN7 141 aa9.78□□□□□ -0.84
HERPUD1-219ENST00000570273 IGLV5-37A0A075B6J1 123 aa9.77□□□□□ -0.85
HERPUD1-219ENST00000570273 IGKV2-28A0A075B6P5 120 aa9.77□□□□□ -0.85
HERPUD1-219ENST00000570273 IGKV2D-28P01615 120 aa9.77□□□□□ -0.85
HERPUD1-219ENST00000570273 RAB37Q96AX2 223 aa9.77□□□□□ -0.85
HERPUD1-219ENST00000570273 A0A0B4J2C4 111 aa9.76□□□□□ -0.85
HERPUD1-219ENST00000570273 A6NDN8 102 aa9.76□□□□□ -0.85
HERPUD1-219ENST00000570273 K7ERJ3 54 aa9.76□□□□□ -0.85
HERPUD1-219ENST00000570273 M0QXV9 152 aa9.76□□□□□ -0.85
HERPUD1-219ENST00000570273 CFC1BP0CG36 223 aa9.76□□□□□ -0.85
HERPUD1-219ENST00000570273 CFC1P0CG37 223 aa9.76□□□□□ -0.85
HERPUD1-219ENST00000570273 KRTAP7-1Q8IUC3 87 aa9.76□□□□□ -0.85
HERPUD1-219ENST00000570273 BIRC6Q9NR09 4857 aa9.76□□□□□ -0.85
HERPUD1-219ENST00000570273 A0A087WYN8 130 aa9.75□□□□□ -0.85
HERPUD1-219ENST00000570273 TRBV10-2A0A0K0K1G8 114 aa9.75□□□□□ -0.85
HERPUD1-219ENST00000570273 M0R378 163 aa9.75□□□□□ -0.85
HERPUD1-219ENST00000570273 LINC00337Q8N6G1 96 aa9.75□□□□□ -0.85
HERPUD1-219ENST00000570273 SNHG12Q9BXW3 62 aa9.75□□□□□ -0.85
HERPUD1-219ENST00000570273 FAM30AQ9NZY2 134 aa9.75□□□□□ -0.85
HERPUD1-219ENST00000570273 C22orf24Q9Y442 160 aa9.75□□□□□ -0.85
HERPUD1-219ENST00000570273 TRAV13-2A0A0B4J235 113 aa9.74□□□□□ -0.85
HERPUD1-219ENST00000570273 GAGE10A6NGK3 116 aa9.74□□□□□ -0.85
HERPUD1-219ENST00000570273 OR13C6PQ8NH95 151 aa9.74□□□□□ -0.85
HERPUD1-219ENST00000570273 A0A1B0GWB2 263 aa9.73□□□□□ -0.85
HERPUD1-219ENST00000570273 S100A7L2Q5SY68 101 aa9.73□□□□□ -0.85
HERPUD1-219ENST00000570273 Q6ZSA8 131 aa9.73□□□□□ -0.85
HERPUD1-219ENST00000570273 C7orf33Q8WU49 177 aa9.73□□□□□ -0.85
HERPUD1-219ENST00000570273 RPL13AP40429 203 aaKnown RBP9.73□□□□□ -0.85
HERPUD1-219ENST00000570273 MRPL55Q7Z7F7 128 aaKnown RBP9.73□□□□□ -0.85
HERPUD1-219ENST00000570273 PLAC8Q9NZF1 115 aa9.73□□□□□ -0.85
HERPUD1-219ENST00000570273 DYNC1H1Q14204 4646 aaKnown RBP9.72□□□□□ -0.85
HERPUD1-219ENST00000570273 TRBV10-3A0A0K0K1G6 114 aa9.72□□□□□ -0.85
HERPUD1-219ENST00000570273 LBHQ53QV2 105 aaPredicted RBP9.72□□□□□ -0.85
HERPUD1-219ENST00000570273 PHF5AQ7RTV0 110 aaKnown RBP9.71□□□□□ -0.86
HERPUD1-219ENST00000570273 PRO1854Q9UHT4 67 aa9.71□□□□□ -0.86
HERPUD1-219ENST00000570273 H7C2G1 150 aa9.7□□□□□ -0.86
HERPUD1-219ENST00000570273 HAMPP81172 84 aa9.7□□□□□ -0.86
HERPUD1-219ENST00000570273 SCXQ7RTU7 201 aa9.7□□□□□ -0.86
HERPUD1-219ENST00000570273 LINC00167Q96N53 147 aa9.7□□□□□ -0.86
HERPUD1-219ENST00000570273 EPM2AB3EWF7 344 aa9.69□□□□□ -0.86
HERPUD1-219ENST00000570273 IGLV6-57P01721 117 aa9.69□□□□□ -0.86
HERPUD1-219ENST00000570273 Q1RN00 199 aa9.69□□□□□ -0.86
HERPUD1-219ENST00000570273 CIRBP-AS1Q8TBR5 109 aa9.69□□□□□ -0.86
HERPUD1-219ENST00000570273 TMEM126AQ9H061 195 aa9.69□□□□□ -0.86
HERPUD1-219ENST00000570273 DNAH8Q96JB1 4490 aa9.69□□□□□ -0.86
HERPUD1-219ENST00000570273 RPL37AP8A6NKH3 93 aa9.68□□□□□ -0.86
HERPUD1-219ENST00000570273 UBE2BP63146 152 aa9.68□□□□□ -0.86
HERPUD1-219ENST00000570273 COL5A1-AS1Q5SY13 56 aa9.67□□□□□ -0.86
HERPUD1-219ENST00000570273 IGLV1-50A0A075B6I6 118 aa9.65□□□□□ -0.86
HERPUD1-219ENST00000570273 TRAV23DV6A0A075B6W5 121 aa9.65□□□□□ -0.86
HERPUD1-219ENST00000570273 TSPAN13O95857 204 aa9.65□□□□□ -0.86
HERPUD1-219ENST00000570273 CBY1Q9Y3M2 126 aa9.65□□□□□ -0.86
HERPUD1-219ENST00000570273 LRP1BQ9NZR2 4599 aa9.65□□□□□ -0.86
HERPUD1-219ENST00000570273 PRYO14603 147 aa9.64□□□□□ -0.87
HERPUD1-219ENST00000570273 SMIM11BQ8TCY0 68 aa9.64□□□□□ -0.87
HERPUD1-219ENST00000570273 TAX1BP3O14907 124 aa9.63□□□□□ -0.87
HERPUD1-219ENST00000570273 KCNQ1DNQ9H478 68 aa9.62□□□□□ -0.87
HERPUD1-219ENST00000570273 ZNF73O43830 326 aaPredicted RBP9.61□□□□□ -0.87
HERPUD1-219ENST00000570273 PSMB2P49721 201 aa9.61□□□□□ -0.87
HERPUD1-219ENST00000570273 KRTAP11-1Q8IUC1 163 aa9.61□□□□□ -0.87
HERPUD1-219ENST00000570273 NAA38Q9BRA0 125 aaKnown RBP9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 134.7 ms