RNA–Protein interactions for RNA: ENST00000569784.1

SCAPER-223, Transcript of S-phase cyclin A associated protein in the ER, human

TSL 4

Gene SCAPER, Length 580 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCAPER-223	ENST00000569784	ADCYAP1	P18509	176 aa		5.09	□□□□□ -1.59
SCAPER-223	ENST00000569784	RPL24	P83731	157 aa	Known RBP	5.09	□□□□□ -1.59
SCAPER-223	ENST00000569784	IGKV2D-26	A0A0A0MRZ7	120 aa		5.08	□□□□□ -1.6
SCAPER-223	ENST00000569784	TMEM218	A2RU14	115 aa		5.08	□□□□□ -1.6
SCAPER-223	ENST00000569784	ATP6V1G1	O75348	118 aa		5.08	□□□□□ -1.6
SCAPER-223	ENST00000569784	FAM19A1	Q7Z5A9	133 aa		5.08	□□□□□ -1.6
SCAPER-223	ENST00000569784	RPS10P5	Q9NQ39	176 aa		5.08	□□□□□ -1.6
SCAPER-223	ENST00000569784	TMEM170B	Q5T4T1	132 aa		5.07	□□□□□ -1.6
SCAPER-223	ENST00000569784	ZNF625	Q96I27	306 aa	Predicted RBP	5.07	□□□□□ -1.6
SCAPER-223	ENST00000569784	SEC11C	Q9BY50	192 aa		5.07	□□□□□ -1.6
SCAPER-223	ENST00000569784	TRIAP1	O43715	76 aa		5.06	□□□□□ -1.6
SCAPER-223	ENST00000569784	ERG28	Q9UKR5	140 aa		5.06	□□□□□ -1.6
SCAPER-223	ENST00000569784	TRAPPC1	Q9Y5R8	145 aa		5.06	□□□□□ -1.6
SCAPER-223	ENST00000569784	IGLV5-45	A0A087WSX0	123 aa		5.05	□□□□□ -1.6
SCAPER-223	ENST00000569784		A0A087X002	238 aa		5.05	□□□□□ -1.6
SCAPER-223	ENST00000569784	HBD	P02042	147 aa		5.05	□□□□□ -1.6
SCAPER-223	ENST00000569784	LINC00158	P58513	81 aa		5.05	□□□□□ -1.6
SCAPER-223	ENST00000569784	SFTA2	Q6UW10	78 aa		5.05	□□□□□ -1.6
SCAPER-223	ENST00000569784	COMMD7	Q86VX2	200 aa		5.05	□□□□□ -1.6
SCAPER-223	ENST00000569784	BAGE3	Q86Y29	109 aa		5.05	□□□□□ -1.6
SCAPER-223	ENST00000569784	ANAPC11	Q9NYG5	84 aa		5.05	□□□□□ -1.6
SCAPER-223	ENST00000569784	IGLV5-37	A0A075B6J1	123 aa		5.04	□□□□□ -1.6
SCAPER-223	ENST00000569784	SCO1	O75880	301 aa		5.04	□□□□□ -1.6
SCAPER-223	ENST00000569784	LINC00614	P0C842	121 aa		5.04	□□□□□ -1.6
SCAPER-223	ENST00000569784	IGLC3	P0DOY3	106 aa		5.04	□□□□□ -1.6
SCAPER-223	ENST00000569784	PRLH	P81277	87 aa		5.04	□□□□□ -1.6
SCAPER-223	ENST00000569784	COX17	Q14061	63 aa		5.04	□□□□□ -1.6
SCAPER-223	ENST00000569784	RHEB	Q15382	184 aa		5.04	□□□□□ -1.6
SCAPER-223	ENST00000569784	LINC00304	Q8N9R0	145 aa		5.04	□□□□□ -1.6
SCAPER-223	ENST00000569784	TNXB	P22105	4242 aa		5.04	□□□□□ -1.6
SCAPER-223	ENST00000569784	LINC01546	A6NGU7	62 aa		5.03	□□□□□ -1.6
SCAPER-223	ENST00000569784	ZNF22	P17026	224 aa	Predicted RBP	5.03	□□□□□ -1.6
SCAPER-223	ENST00000569784	S100A12	P80511	92 aa		5.03	□□□□□ -1.6
SCAPER-223	ENST00000569784	PMCHL1	Q16048	86 aa		5.03	□□□□□ -1.6
SCAPER-223	ENST00000569784	NDUFA5	Q16718	116 aa		5.03	□□□□□ -1.6
SCAPER-223	ENST00000569784	CBLN2	Q8IUK8	224 aa		5.03	□□□□□ -1.6
SCAPER-223	ENST00000569784	HIGD2A	Q9BW72	106 aa		5.03	□□□□□ -1.6
SCAPER-223	ENST00000569784	TMEM126A	Q9H061	195 aa		5.03	□□□□□ -1.6
SCAPER-223	ENST00000569784	SND1-IT1	Q9HBX3	110 aa		5.03	□□□□□ -1.6
SCAPER-223	ENST00000569784	LRP2	P98164	4655 aa		5.03	□□□□□ -1.6
SCAPER-223	ENST00000569784		A0A0U1RRA0	63 aa		5.02	□□□□□ -1.61
SCAPER-223	ENST00000569784	FAM229B	Q4G0N7	80 aa		5.02	□□□□□ -1.61
SCAPER-223	ENST00000569784	MEIG1	Q5JSS6	88 aa		5.02	□□□□□ -1.61
SCAPER-223	ENST00000569784	RETNLB	Q9BQ08	111 aa		5.02	□□□□□ -1.61
SCAPER-223	ENST00000569784	CHTOP	Q9Y3Y2	248 aa	Known RBP	5.02	□□□□□ -1.61
SCAPER-223	ENST00000569784	TMEM238	C9JI98	176 aa		5.01	□□□□□ -1.61
SCAPER-223	ENST00000569784	ZNF706	Q9Y5V0	76 aa	Predicted RBP	5.01	□□□□□ -1.61
SCAPER-223	ENST00000569784	VPREB1	P12018	145 aa		5	□□□□□ -1.61
SCAPER-223	ENST00000569784	C18orf32	Q8TCD1	76 aa		5	□□□□□ -1.61
SCAPER-223	ENST00000569784	RNF213	Q63HN8	5207 aa		5	□□□□□ -1.61
SCAPER-223	ENST00000569784	IGLV5-39	A0A0G2JS06	123 aa		4.99	□□□□□ -1.61
SCAPER-223	ENST00000569784	C11orf86	A6NJI1	115 aa		4.99	□□□□□ -1.61
SCAPER-223	ENST00000569784		H0Y8G0	127 aa		4.99	□□□□□ -1.61
SCAPER-223	ENST00000569784	SNAPIN	O95295	136 aa		4.99	□□□□□ -1.61
SCAPER-223	ENST00000569784	APOC3	P02656	99 aa		4.99	□□□□□ -1.61
SCAPER-223	ENST00000569784	KRTAP13-2	Q52LG2	175 aa		4.99	□□□□□ -1.61
SCAPER-223	ENST00000569784	MAP1LC3C	Q9BXW4	147 aa		4.99	□□□□□ -1.61
SCAPER-223	ENST00000569784	IGLV7-46	A0A075B6I9	117 aa		4.98	□□□□□ -1.61
SCAPER-223	ENST00000569784	ETDC	A0A1B0GVM5	59 aa		4.98	□□□□□ -1.61
SCAPER-223	ENST00000569784	LINC00587	B1AMM8	73 aa		4.98	□□□□□ -1.61
SCAPER-223	ENST00000569784		M0R378	163 aa		4.98	□□□□□ -1.61
SCAPER-223	ENST00000569784	NCR3	O14931	201 aa		4.98	□□□□□ -1.61
SCAPER-223	ENST00000569784	SPAG11A	Q6PDA7	123 aa		4.98	□□□□□ -1.61
SCAPER-223	ENST00000569784	BOD1L2	Q8IYS8	172 aa		4.98	□□□□□ -1.61
SCAPER-223	ENST00000569784	IFI27L1	Q96BM0	104 aa		4.98	□□□□□ -1.61
SCAPER-223	ENST00000569784	HSBP1	O75506	76 aa		4.97	□□□□□ -1.61
SCAPER-223	ENST00000569784	IFITM2	Q01629	132 aa		4.97	□□□□□ -1.61
SCAPER-223	ENST00000569784	KRTAP13-1	Q8IUC0	172 aa		4.97	□□□□□ -1.61
SCAPER-223	ENST00000569784	SVBP	Q8N300	66 aa		4.97	□□□□□ -1.61
SCAPER-223	ENST00000569784	LINC00337	Q8N6G1	96 aa		4.97	□□□□□ -1.61
SCAPER-223	ENST00000569784		A0A096LNJ9	63 aa		4.96	□□□□□ -1.62
SCAPER-223	ENST00000569784	PRY	O14603	147 aa		4.96	□□□□□ -1.62
SCAPER-223	ENST00000569784	SMIM13	P0DJ93	91 aa		4.96	□□□□□ -1.62
SCAPER-223	ENST00000569784	HERV-K104	P63124	156 aa		4.96	□□□□□ -1.62
SCAPER-223	ENST00000569784	C3orf22	Q8N5N4	141 aa		4.96	□□□□□ -1.62
SCAPER-223	ENST00000569784	CHCHD1	Q96BP2	118 aa	Known RBP	4.96	□□□□□ -1.62
SCAPER-223	ENST00000569784	PLEKHB2	Q96CS7	222 aa		4.96	□□□□□ -1.62
SCAPER-223	ENST00000569784	MIEN1	Q9BRT3	115 aa		4.96	□□□□□ -1.62
SCAPER-223	ENST00000569784	TRAV12-1	A0A0B4J245	112 aa		4.95	□□□□□ -1.62
SCAPER-223	ENST00000569784	MYMX	A0A1B0GTQ4	84 aa		4.95	□□□□□ -1.62
SCAPER-223	ENST00000569784	TMEM223	A0PJW6	202 aa		4.95	□□□□□ -1.62
SCAPER-223	ENST00000569784	CTAG1A	P78358	180 aa		4.95	□□□□□ -1.62
SCAPER-223	ENST00000569784	C10orf91	Q5T1B1	145 aa		4.95	□□□□□ -1.62
SCAPER-223	ENST00000569784	URB1-AS1	Q96HZ7	61 aa		4.95	□□□□□ -1.62
SCAPER-223	ENST00000569784	KRTAP9-8	Q9BYQ0	159 aa		4.95	□□□□□ -1.62
SCAPER-223	ENST00000569784	PPDPF	Q9H3Y8	114 aa		4.95	□□□□□ -1.62
SCAPER-223	ENST00000569784	NDUFA12	Q9UI09	145 aa		4.95	□□□□□ -1.62
SCAPER-223	ENST00000569784	LPA	P08519	4548 aa		4.95	□□□□□ -1.62
SCAPER-223	ENST00000569784	HERVK_113	P61574	105 aa		4.94	□□□□□ -1.62
SCAPER-223	ENST00000569784	MIR7-3HG	Q8N6C7	128 aa		4.94	□□□□□ -1.62
SCAPER-223	ENST00000569784	SPRR4	Q96PI1	79 aa		4.94	□□□□□ -1.62
SCAPER-223	ENST00000569784	TPRXL	Q17RH7	258 aa		4.93	□□□□□ -1.62
SCAPER-223	ENST00000569784	S100A7L2	Q5SY68	101 aa		4.93	□□□□□ -1.62
SCAPER-223	ENST00000569784	DAND5	Q8N907	189 aa		4.93	□□□□□ -1.62
SCAPER-223	ENST00000569784	SMCR5	Q8TEV8	140 aa		4.93	□□□□□ -1.62
SCAPER-223	ENST00000569784	IGLV9-49	A0A0B4J1Y8	123 aa		4.92	□□□□□ -1.62
SCAPER-223	ENST00000569784	GAGE2A	Q6NT46	116 aa		4.92	□□□□□ -1.62
SCAPER-223	ENST00000569784		Q8NBF4	154 aa		4.92	□□□□□ -1.62
SCAPER-223	ENST00000569784	LEPROTL1	O95214	131 aa		4.91	□□□□□ -1.62
SCAPER-223	ENST00000569784	LGALS3	P17931	250 aa	Known RBP	4.91	□□□□□ -1.62

Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms