RNA–Protein interactions for RNA: ENST00000569773.1

GDE1-204, Transcript of glycerophosphodiester phosphodiesterase 1, humanhuman

TSL 3

Gene GDE1, Length 739 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDE1-204ENST00000569773 NUP35Q8NFH5 326 aa3.36□□□□□ -1.87
GDE1-204ENST00000569773 TMEM126AQ9H061 195 aa3.36□□□□□ -1.87
GDE1-204ENST00000569773 HSPB8Q9UJY1 196 aa3.36□□□□□ -1.87
GDE1-204ENST00000569773 NEBP20929 6669 aa3.36□□□□□ -1.87
GDE1-204ENST00000569773 IGLV4-69A0A075B6H9 119 aa3.35□□□□□ -1.87
GDE1-204ENST00000569773 A0A1B0GUT8 65 aa3.35□□□□□ -1.87
GDE1-204ENST00000569773 HIGD1CA8MV81 97 aa3.35□□□□□ -1.87
GDE1-204ENST00000569773 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.35□□□□□ -1.87
GDE1-204ENST00000569773 KRTAP5-9P26371 169 aa3.35□□□□□ -1.87
GDE1-204ENST00000569773 PSMB2P49721 201 aa3.35□□□□□ -1.87
GDE1-204ENST00000569773 LINC01551Q86U37 167 aa3.35□□□□□ -1.87
GDE1-204ENST00000569773 KRTAP11-1Q8IUC1 163 aa3.35□□□□□ -1.87
GDE1-204ENST00000569773 TSKUQ8WUA8 353 aa3.35□□□□□ -1.87
GDE1-204ENST00000569773 ST20Q9HBF5 79 aa3.35□□□□□ -1.87
GDE1-204ENST00000569773 PSORS1C2Q9UIG4 136 aa3.35□□□□□ -1.87
GDE1-204ENST00000569773 UBE2D4Q9Y2X8 147 aa3.35□□□□□ -1.87
GDE1-204ENST00000569773 LOC107984640A0A0U1RRK4 108 aa3.34□□□□□ -1.87
GDE1-204ENST00000569773 C7orf77A4D0Y5 90 aa3.34□□□□□ -1.87
GDE1-204ENST00000569773 NDUFS5O43920 106 aa3.34□□□□□ -1.87
GDE1-204ENST00000569773 SS18Q15532 418 aa3.34□□□□□ -1.87
GDE1-204ENST00000569773 AMN1Q8IY45 258 aa3.34□□□□□ -1.87
GDE1-204ENST00000569773 TMEM101Q96IK0 257 aa3.34□□□□□ -1.87
GDE1-204ENST00000569773 TIMM21Q9BVV7 248 aa3.34□□□□□ -1.87
GDE1-204ENST00000569773 OSTCQ9NRP0 149 aa3.34□□□□□ -1.87
GDE1-204ENST00000569773 V9GYV3 84 aa3.34□□□□□ -1.87
GDE1-204ENST00000569773 TRBV24-1A0A075B6N3 115 aa3.33□□□□□ -1.88
GDE1-204ENST00000569773 IGHV3OR16-9A0A0B4J2B5 98 aa3.33□□□□□ -1.88
GDE1-204ENST00000569773 C1orf196B1AJZ1 125 aa3.33□□□□□ -1.88
GDE1-204ENST00000569773 COX7A2LO14548 114 aa3.33□□□□□ -1.88
GDE1-204ENST00000569773 NDUFC2O95298 119 aa3.33□□□□□ -1.88
GDE1-204ENST00000569773 APOMO95445 188 aa3.33□□□□□ -1.88
GDE1-204ENST00000569773 KRTAP1-4P0C5Y4 121 aa3.33□□□□□ -1.88
GDE1-204ENST00000569773 DDTP30046 118 aa3.33□□□□□ -1.88
GDE1-204ENST00000569773 C9orf116Q5BN46 136 aaPredicted RBP3.33□□□□□ -1.88
GDE1-204ENST00000569773 RNASE13Q5GAN3 156 aaKnown RBP3.33□□□□□ -1.88
GDE1-204ENST00000569773 ALKAL2Q6UX46 152 aa3.33□□□□□ -1.88
GDE1-204ENST00000569773 SCGB1D4Q6XE38 83 aa3.33□□□□□ -1.88
GDE1-204ENST00000569773 Q6ZUT4 128 aa3.33□□□□□ -1.88
GDE1-204ENST00000569773 HIST1H4GQ99525 98 aa3.33□□□□□ -1.88
GDE1-204ENST00000569773 GNB1LQ9BYB4 327 aa3.33□□□□□ -1.88
GDE1-204ENST00000569773 A0A1B0GXF2 115 aa3.32□□□□□ -1.88
GDE1-204ENST00000569773 J3KT08 172 aa3.32□□□□□ -1.88
GDE1-204ENST00000569773 SRP19P09132 144 aaKnown RBP3.32□□□□□ -1.88
GDE1-204ENST00000569773 TLX1NBP0CAT3 122 aa3.32□□□□□ -1.88
GDE1-204ENST00000569773 RPL39P62891 51 aaKnown RBP3.32□□□□□ -1.88
GDE1-204ENST00000569773 MRPL51Q4U2R6 128 aaKnown RBP3.32□□□□□ -1.88
GDE1-204ENST00000569773 FAM104BQ5XKR9 115 aa3.32□□□□□ -1.88
GDE1-204ENST00000569773 PHF5AQ7RTV0 110 aaKnown RBP3.32□□□□□ -1.88
GDE1-204ENST00000569773 C5orf38Q86SI9 138 aa3.32□□□□□ -1.88
GDE1-204ENST00000569773 CAMK2N2Q96S95 79 aa3.32□□□□□ -1.88
GDE1-204ENST00000569773 SMIM7Q9BQ49 75 aa3.32□□□□□ -1.88
GDE1-204ENST00000569773 GPR98Q8WXG9 6306 aa3.31□□□□□ -1.88
GDE1-204ENST00000569773 TRAV13-1A0A0B4J241 112 aa3.31□□□□□ -1.88
GDE1-204ENST00000569773 SMIM27A0A1W2PRY6 76 aa3.31□□□□□ -1.88
GDE1-204ENST00000569773 C20orf202A1L168 122 aa3.31□□□□□ -1.88
GDE1-204ENST00000569773 C9JQL5 133 aa3.31□□□□□ -1.88
GDE1-204ENST00000569773 C8orf87E5RJ46 101 aa3.31□□□□□ -1.88
GDE1-204ENST00000569773 H0Y9J4 135 aa3.31□□□□□ -1.88
GDE1-204ENST00000569773 IGLV7-43P04211 117 aa3.31□□□□□ -1.88
GDE1-204ENST00000569773 MRPS36P82909 103 aaKnown RBP3.31□□□□□ -1.88
GDE1-204ENST00000569773 KIAA0087Q14695 138 aa3.31□□□□□ -1.88
GDE1-204ENST00000569773 JOSD1Q15040 202 aaPredicted RBP3.31□□□□□ -1.88
GDE1-204ENST00000569773 RHEBQ15382 184 aa3.31□□□□□ -1.88
GDE1-204ENST00000569773 ANKRD29Q8N6D5 301 aa3.31□□□□□ -1.88
GDE1-204ENST00000569773 OR10D4PQ8NGN7 298 aa3.31□□□□□ -1.88
GDE1-204ENST00000569773 KRTAP4-4Q9BYR3 166 aa3.31□□□□□ -1.88
GDE1-204ENST00000569773 MRPL35Q9NZE8 188 aaKnown RBP3.31□□□□□ -1.88
GDE1-204ENST00000569773 LINC00862A6NCI5 91 aa3.3□□□□□ -1.88
GDE1-204ENST00000569773 ZNF727A8MUV8 499 aa3.3□□□□□ -1.88
GDE1-204ENST00000569773 PPP1R17O96001 155 aa3.3□□□□□ -1.88
GDE1-204ENST00000569773 MT-ND6P03923 174 aa3.3□□□□□ -1.88
GDE1-204ENST00000569773 FCER1GP30273 86 aa3.3□□□□□ -1.88
GDE1-204ENST00000569773 RPL23P62829 140 aaKnown RBP3.3□□□□□ -1.88
GDE1-204ENST00000569773 RPS28P62857 69 aaKnown RBP3.3□□□□□ -1.88
GDE1-204ENST00000569773 SPAG11BQ08648 103 aa3.3□□□□□ -1.88
GDE1-204ENST00000569773 C1orf137Q5JT78 98 aa3.3□□□□□ -1.88
GDE1-204ENST00000569773 C20orf78Q9BR46 151 aa3.3□□□□□ -1.88
GDE1-204ENST00000569773 C6orf48Q9UBA6 75 aa3.3□□□□□ -1.88
GDE1-204ENST00000569773 MACF1Q9UPN3 7388 aaKnown RBP3.3□□□□□ -1.88
GDE1-204ENST00000569773 SSPOA2VEC9 5147 aa3.29□□□□□ -1.88
GDE1-204ENST00000569773 IGLV8-61A0A075B6I0 122 aa3.29□□□□□ -1.88
GDE1-204ENST00000569773 SMIM26A0A096LP01 95 aa3.29□□□□□ -1.88
GDE1-204ENST00000569773 A0A1B0GX51 115 aa3.29□□□□□ -1.88
GDE1-204ENST00000569773 A8MU10 97 aa3.29□□□□□ -1.88
GDE1-204ENST00000569773 NPYP01303 97 aa3.29□□□□□ -1.88
GDE1-204ENST00000569773 C9orf129Q5T035 196 aaKnown RBP3.29□□□□□ -1.88
GDE1-204ENST00000569773 UNQ6190/PRO20217Q6UXQ8 127 aa3.29□□□□□ -1.88
GDE1-204ENST00000569773 ATP5L2Q7Z4Y8 100 aa3.29□□□□□ -1.88
GDE1-204ENST00000569773 ORAOV1Q8WV07 137 aa3.29□□□□□ -1.88
GDE1-204ENST00000569773 DIRC1Q969H9 104 aa3.29□□□□□ -1.88
GDE1-204ENST00000569773 SMIM2Q9BVW6 85 aa3.29□□□□□ -1.88
GDE1-204ENST00000569773 EIF5A2Q9GZV4 153 aaKnown RBP3.29□□□□□ -1.88
GDE1-204ENST00000569773 SMDT1Q9H4I9 107 aa3.29□□□□□ -1.88
GDE1-204ENST00000569773 NAT8BQ9UHF3 227 aa3.29□□□□□ -1.88
GDE1-204ENST00000569773 IGLV1-50A0A075B6I6 118 aa3.28□□□□□ -1.88
GDE1-204ENST00000569773 KRTAP9-6A8MVA2 160 aa3.28□□□□□ -1.88
GDE1-204ENST00000569773 D6R8Y8 96 aa3.28□□□□□ -1.88
GDE1-204ENST00000569773 NDUFA1O15239 70 aa3.28□□□□□ -1.88
GDE1-204ENST00000569773 CKS2P33552 79 aa3.28□□□□□ -1.88
GDE1-204ENST00000569773 TMEM241Q24JQ0 296 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms