RNA–Protein interactions for RNA: ENST00000569243.5

UBR1-209, Transcript of ubiquitin protein ligase E3 component n-recognin 1, human

TSL 3

Gene UBR1, Length 702 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBR1-209	ENST00000569243	ATP5EP2	Q5VTU8	51 aa		0.52	□□□□□ -2.33
UBR1-209	ENST00000569243	GAFA1	Q96PS6	74 aa		0.52	□□□□□ -2.33
UBR1-209	ENST00000569243	DIP2A	Q14689	1571 aa		0.52	□□□□□ -2.33
UBR1-209	ENST00000569243	CDC42BPG	Q6DT37	1551 aa		0.52	□□□□□ -2.33
UBR1-209	ENST00000569243	LAMC1	P11047	1609 aa		0.52	□□□□□ -2.33
UBR1-209	ENST00000569243	NES	P48681	1621 aa		0.52	□□□□□ -2.33
UBR1-209	ENST00000569243	ABCA9	Q8IUA7	1624 aa		0.52	□□□□□ -2.33
UBR1-209	ENST00000569243	ALK	Q9UM73	1620 aa		0.52	□□□□□ -2.33
UBR1-209	ENST00000569243	LRRC37A2	A6NM11	1700 aa		0.52	□□□□□ -2.33
UBR1-209	ENST00000569243	PKD1L3	Q7Z443	1732 aa		0.52	□□□□□ -2.33
UBR1-209	ENST00000569243	XRN1	Q8IZH2	1706 aa	Known RBP	0.52	□□□□□ -2.33
UBR1-209	ENST00000569243		A0A087WWC5	75 aa		0.51	□□□□□ -2.33
UBR1-209	ENST00000569243		A0A0D9SFI3	127 aa		0.51	□□□□□ -2.33
UBR1-209	ENST00000569243	HMGA1	P17096	107 aa	Known RBP	0.51	□□□□□ -2.33
UBR1-209	ENST00000569243	NKTR	P30414	1462 aa	Known RBP	0.51	□□□□□ -2.33
UBR1-209	ENST00000569243	PRB3	Q04118	309 aa	Predicted RBP	0.51	□□□□□ -2.33
UBR1-209	ENST00000569243	URB2	Q14146	1524 aa	Known RBP	0.51	□□□□□ -2.33
UBR1-209	ENST00000569243	CACNA1E	Q15878	2313 aa		0.51	□□□□□ -2.33
UBR1-209	ENST00000569243	NREP	Q16612	68 aa		0.51	□□□□□ -2.33
UBR1-209	ENST00000569243	RALGAPB	Q86X10	1494 aa		0.51	□□□□□ -2.33
UBR1-209	ENST00000569243	LMTK2	Q8IWU2	1503 aa		0.51	□□□□□ -2.33
UBR1-209	ENST00000569243	THOC2	Q8NI27	1593 aa	Known RBP	0.51	□□□□□ -2.33
UBR1-209	ENST00000569243	ZNF462	Q96JM2	2506 aa		0.51	□□□□□ -2.33
UBR1-209	ENST00000569243	FAM103A1	Q9BTL3	118 aa	Known RBP	0.51	□□□□□ -2.33
UBR1-209	ENST00000569243	CD163L1	Q9NR16	1453 aa		0.51	□□□□□ -2.33
UBR1-209	ENST00000569243	FMN2	Q9NZ56	1722 aa		0.51	□□□□□ -2.33
UBR1-209	ENST00000569243	FAM208B	Q5VWN6	2430 aa		0.5	□□□□□ -2.33
UBR1-209	ENST00000569243	PLCE1	Q9P212	2302 aa		0.5	□□□□□ -2.33
UBR1-209	ENST00000569243	DOPEY2	Q9Y3R5	2298 aa		0.5	□□□□□ -2.33
UBR1-209	ENST00000569243	UBR3	Q6ZT12	1888 aa		0.5	□□□□□ -2.33
UBR1-209	ENST00000569243	KIAA0556	O60303	1618 aa		0.5	□□□□□ -2.33
UBR1-209	ENST00000569243	PIN1P1	O15428	100 aa		0.5	□□□□□ -2.33
UBR1-209	ENST00000569243	ATXN8	Q156A1	80 aa		0.5	□□□□□ -2.33
UBR1-209	ENST00000569243	C10orf95	Q9H7T3	257 aa		0.5	□□□□□ -2.33
UBR1-209	ENST00000569243	PLXNB2	O15031	1838 aa		0.5	□□□□□ -2.33
UBR1-209	ENST00000569243	TIAM2	Q8IVF5	1701 aa		0.5	□□□□□ -2.33
UBR1-209	ENST00000569243	PAPPA	Q13219	1627 aa		0.49	□□□□□ -2.33
UBR1-209	ENST00000569243	CCDC180	Q9P1Z9	1646 aa		0.49	□□□□□ -2.33
UBR1-209	ENST00000569243	PRPF8	Q6P2Q9	2335 aa	Known RBP eCLIP	0.49	□□□□□ -2.33
UBR1-209	ENST00000569243		I3L2K1	104 aa		0.49	□□□□□ -2.33
UBR1-209	ENST00000569243	COX7B	P24311	80 aa		0.49	□□□□□ -2.33
UBR1-209	ENST00000569243	ENHO	Q6UWT2	76 aa		0.49	□□□□□ -2.33
UBR1-209	ENST00000569243	CACNA1H	O95180	2353 aa		0.49	□□□□□ -2.33
UBR1-209	ENST00000569243	RICTOR	Q6R327	1708 aa		0.49	□□□□□ -2.33
UBR1-209	ENST00000569243	DOT1L	Q8TEK3	1739 aa		0.49	□□□□□ -2.33
UBR1-209	ENST00000569243	WIZ	O95785	1651 aa		0.49	□□□□□ -2.33
UBR1-209	ENST00000569243	MDN1	Q9NU22	5596 aa		0.49	□□□□□ -2.33
UBR1-209	ENST00000569243	GLI2	P10070	1586 aa		0.49	□□□□□ -2.33
UBR1-209	ENST00000569243	TULP4	Q9NRJ4	1543 aa		0.48	□□□□□ -2.33
UBR1-209	ENST00000569243	TNC	P24821	2201 aa		0.48	□□□□□ -2.33
UBR1-209	ENST00000569243		A0A0D9SG42	100 aa		0.48	□□□□□ -2.33
UBR1-209	ENST00000569243	LINC01549	A6NIU2	74 aa		0.48	□□□□□ -2.33
UBR1-209	ENST00000569243		K7EMI3	77 aa		0.48	□□□□□ -2.33
UBR1-209	ENST00000569243	NDUFA4	O00483	81 aa		0.48	□□□□□ -2.33
UBR1-209	ENST00000569243	NDUFB1	O75438	58 aa		0.48	□□□□□ -2.33
UBR1-209	ENST00000569243	TP53AIP1	Q9HCN2	124 aa		0.48	□□□□□ -2.33
UBR1-209	ENST00000569243	ASH1L	Q9NR48	2969 aa	Known RBP	0.48	□□□□□ -2.33
UBR1-209	ENST00000569243	PRO0255	Q9UI72	69 aa		0.48	□□□□□ -2.33
UBR1-209	ENST00000569243	PREX1	Q8TCU6	1659 aa		0.48	□□□□□ -2.33
UBR1-209	ENST00000569243	SPTBN2	O15020	2390 aa		0.48	□□□□□ -2.33
UBR1-209	ENST00000569243	C2CD3	Q4AC94	2353 aa		0.48	□□□□□ -2.33
UBR1-209	ENST00000569243	POLR1A	O95602	1720 aa	Predicted RBP	0.47	□□□□□ -2.33
UBR1-209	ENST00000569243	PARP4	Q9UKK3	1724 aa	Known RBP	0.47	□□□□□ -2.33
UBR1-209	ENST00000569243	CSMD3	Q7Z407	3707 aa		0.47	□□□□□ -2.33
UBR1-209	ENST00000569243	CFAP43	Q8NDM7	1665 aa		0.47	□□□□□ -2.33
UBR1-209	ENST00000569243	ABCA6	Q8N139	1617 aa		0.47	□□□□□ -2.33
UBR1-209	ENST00000569243	SPTY2D1-AS1	A0A0U1RR47	76 aa		0.47	□□□□□ -2.33
UBR1-209	ENST00000569243		K7EQZ3	153 aa		0.47	□□□□□ -2.33
UBR1-209	ENST00000569243	FXYD6P3	P58550	94 aa		0.47	□□□□□ -2.33
UBR1-209	ENST00000569243	SPINK9	Q5DT21	86 aa		0.47	□□□□□ -2.33
UBR1-209	ENST00000569243	LELP1	Q5T871	98 aa		0.47	□□□□□ -2.33
UBR1-209	ENST00000569243	SMIM5	Q71RC9	77 aa		0.47	□□□□□ -2.33
UBR1-209	ENST00000569243	TIAM1	Q13009	1591 aa		0.47	□□□□□ -2.33
UBR1-209	ENST00000569243	F8	P00451	2351 aa		0.47	□□□□□ -2.33
UBR1-209	ENST00000569243	SPTBN1	Q01082	2364 aa	Known RBP	0.47	□□□□□ -2.33
UBR1-209	ENST00000569243	BCOR	Q6W2J9	1755 aa		0.47	□□□□□ -2.33
UBR1-209	ENST00000569243	PRX	Q9BXM0	1461 aa		0.47	□□□□□ -2.33
UBR1-209	ENST00000569243		A0A0G2JMZ2	1700 aa		0.47	□□□□□ -2.33
UBR1-209	ENST00000569243	NRAP	Q86VF7	1730 aa		0.47	□□□□□ -2.33
UBR1-209	ENST00000569243	EEA1	Q15075	1411 aa		0.47	□□□□□ -2.33
UBR1-209	ENST00000569243	PLCH1	Q4KWH8	1693 aa		0.46	□□□□□ -2.34
UBR1-209	ENST00000569243	USF3	Q68DE3	2245 aa		0.46	□□□□□ -2.34
UBR1-209	ENST00000569243	PREX2	Q70Z35	1606 aa		0.46	□□□□□ -2.34
UBR1-209	ENST00000569243	CNOT1	A5YKK6	2376 aa	Known RBP	0.46	□□□□□ -2.34
UBR1-209	ENST00000569243	PLXNC1	O60486	1568 aa		0.46	□□□□□ -2.34
UBR1-209	ENST00000569243	LCE6A	A0A183	80 aa		0.46	□□□□□ -2.34
UBR1-209	ENST00000569243	FCER1G	P30273	86 aa		0.46	□□□□□ -2.34
UBR1-209	ENST00000569243	EIF2AK4	Q9P2K8	1649 aa	Known RBP	0.46	□□□□□ -2.34
UBR1-209	ENST00000569243	TTC28	Q96AY4	2481 aa		0.45	□□□□□ -2.34
UBR1-209	ENST00000569243	COL14A1	Q05707	1796 aa	Known RBP	0.45	□□□□□ -2.34
UBR1-209	ENST00000569243	BSN	Q9UPA5	3926 aa		0.45	□□□□□ -2.34
UBR1-209	ENST00000569243	ABCA10	Q8WWZ4	1543 aa		0.45	□□□□□ -2.34
UBR1-209	ENST00000569243	CPSF4L	A6NMK7	179 aa	Known RBP	0.45	□□□□□ -2.34
UBR1-209	ENST00000569243	COX6A2	Q02221	97 aa		0.45	□□□□□ -2.34
UBR1-209	ENST00000569243	PIGY	Q3MUY2	71 aa		0.45	□□□□□ -2.34
UBR1-209	ENST00000569243	CNFN	Q9BYD5	112 aa		0.45	□□□□□ -2.34
UBR1-209	ENST00000569243	FXYD6	Q9H0Q3	95 aa		0.45	□□□□□ -2.34
UBR1-209	ENST00000569243	PTPRZ1	P23471	2315 aa	Predicted RBP	0.45	□□□□□ -2.34
UBR1-209	ENST00000569243	PTPRQ	Q9UMZ3	2332 aa		0.45	□□□□□ -2.34
UBR1-209	ENST00000569243	KIF1A	Q12756	1690 aa		0.45	□□□□□ -2.34

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