RNA–Protein interactions for RNA: ENST00000569080.1

CDH3-209, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 291 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-209ENST00000569080 FAM19A2Q8N3H0 131 aa4.61□□□□□ -1.67
CDH3-209ENST00000569080 TMEM238C9JI98 176 aa4.6□□□□□ -1.67
CDH3-209ENST00000569080 M0R378 163 aa4.6□□□□□ -1.67
CDH3-209ENST00000569080 HSBP1O75506 76 aa4.6□□□□□ -1.67
CDH3-209ENST00000569080 TRGC2P03986 189 aa4.6□□□□□ -1.67
CDH3-209ENST00000569080 PRLHP81277 87 aa4.6□□□□□ -1.67
CDH3-209ENST00000569080 KRTAP13-2Q52LG2 175 aa4.6□□□□□ -1.67
CDH3-209ENST00000569080 TMEM126AQ9H061 195 aa4.6□□□□□ -1.67
CDH3-209ENST00000569080 ANAPC11Q9NYG5 84 aa4.6□□□□□ -1.67
CDH3-209ENST00000569080 SERF1AO75920 110 aa4.59□□□□□ -1.67
CDH3-209ENST00000569080 TSPEAR-AS2P59090 65 aa4.59□□□□□ -1.67
CDH3-209ENST00000569080 UBE2AP49459 152 aa4.58□□□□□ -1.68
CDH3-209ENST00000569080 RPL24P83731 157 aaKnown RBP4.58□□□□□ -1.68
CDH3-209ENST00000569080 SLC7A5P1Q8MH63 180 aa4.58□□□□□ -1.68
CDH3-209ENST00000569080 A0A0U1RRA0 63 aa4.57□□□□□ -1.68
CDH3-209ENST00000569080 COLCA2A8K830 154 aa4.57□□□□□ -1.68
CDH3-209ENST00000569080 SMIM13P0DJ93 91 aa4.57□□□□□ -1.68
CDH3-209ENST00000569080 CRYGAP11844 174 aa4.57□□□□□ -1.68
CDH3-209ENST00000569080 LINC00158P58513 81 aa4.57□□□□□ -1.68
CDH3-209ENST00000569080 FAM229BQ4G0N7 80 aa4.57□□□□□ -1.68
CDH3-209ENST00000569080 LEPROTL1O95214 131 aa4.56□□□□□ -1.68
CDH3-209ENST00000569080 HERV-K104P63124 156 aa4.56□□□□□ -1.68
CDH3-209ENST00000569080 FAM19A1Q7Z5A9 133 aa4.56□□□□□ -1.68
CDH3-209ENST00000569080 MIR7-3HGQ8N6C7 128 aa4.56□□□□□ -1.68
CDH3-209ENST00000569080 TYMSOSQ8TAI1 123 aa4.56□□□□□ -1.68
CDH3-209ENST00000569080 NDUFA12Q9UI09 145 aa4.56□□□□□ -1.68
CDH3-209ENST00000569080 KRTAP4-16G5E9R7 235 aaPredicted RBP4.55□□□□□ -1.68
CDH3-209ENST00000569080 H0Y8G0 127 aa4.55□□□□□ -1.68
CDH3-209ENST00000569080 PLNP26678 52 aa4.55□□□□□ -1.68
CDH3-209ENST00000569080 SPRR1AP35321 89 aa4.55□□□□□ -1.68
CDH3-209ENST00000569080 PRR4Q16378 134 aa4.55□□□□□ -1.68
CDH3-209ENST00000569080 C4orf48Q5BLP8 95 aa4.55□□□□□ -1.68
CDH3-209ENST00000569080 PLEKHB2Q96CS7 222 aa4.55□□□□□ -1.68
CDH3-209ENST00000569080 IGKV2D-26A0A0A0MRZ7 120 aa4.54□□□□□ -1.68
CDH3-209ENST00000569080 LOC107984156A0A0G2JMH3 177 aa4.54□□□□□ -1.68
CDH3-209ENST00000569080 PRYO14603 147 aa4.54□□□□□ -1.68
CDH3-209ENST00000569080 NCR3O14931 201 aa4.54□□□□□ -1.68
CDH3-209ENST00000569080 LEPROTO15243 131 aa4.54□□□□□ -1.68
CDH3-209ENST00000569080 TSPAN13O95857 204 aa4.54□□□□□ -1.68
CDH3-209ENST00000569080 MEIG1Q5JSS6 88 aa4.54□□□□□ -1.68
CDH3-209ENST00000569080 ARL17AQ8IVW1 177 aa4.54□□□□□ -1.68
CDH3-209ENST00000569080 BOD1L2Q8IYS8 172 aa4.54□□□□□ -1.68
CDH3-209ENST00000569080 PMCHL2Q9BQD1 86 aa4.54□□□□□ -1.68
CDH3-209ENST00000569080 KCNQ1DNQ9H478 68 aa4.54□□□□□ -1.68
CDH3-209ENST00000569080 HSPB8Q9UJY1 196 aa4.54□□□□□ -1.68
CDH3-209ENST00000569080 MYMXA0A1B0GTQ4 84 aa4.53□□□□□ -1.68
CDH3-209ENST00000569080 J3QQQ9 107 aa4.53□□□□□ -1.68
CDH3-209ENST00000569080 DPM2O94777 84 aa4.53□□□□□ -1.68
CDH3-209ENST00000569080 LINC00337Q8N6G1 96 aa4.53□□□□□ -1.68
CDH3-209ENST00000569080 DAND5Q8N907 189 aa4.53□□□□□ -1.68
CDH3-209ENST00000569080 LINC00304Q8N9R0 145 aa4.53□□□□□ -1.68
CDH3-209ENST00000569080 SPRR4Q96PI1 79 aa4.53□□□□□ -1.68
CDH3-209ENST00000569080 MUC17Q685J3 4493 aa4.52□□□□□ -1.69
CDH3-209ENST00000569080 TRBV10-3A0A0K0K1G6 114 aa4.52□□□□□ -1.69
CDH3-209ENST00000569080 LINC00587B1AMM8 73 aa4.52□□□□□ -1.69
CDH3-209ENST00000569080 IGKCP01834 107 aa4.52□□□□□ -1.69
CDH3-209ENST00000569080 FABP4P15090 132 aa4.52□□□□□ -1.69
CDH3-209ENST00000569080 SMCPP49901 116 aaPredicted RBP4.52□□□□□ -1.69
CDH3-209ENST00000569080 C3orf22Q8N5N4 141 aa4.52□□□□□ -1.69
CDH3-209ENST00000569080 HIGD2AQ9BW72 106 aa4.52□□□□□ -1.69
CDH3-209ENST00000569080 FAT4Q6V0I7 4981 aa4.52□□□□□ -1.69
CDH3-209ENST00000569080 EIF4EBP3O60516 100 aaPredicted RBP4.51□□□□□ -1.69
CDH3-209ENST00000569080 HIST1H2BKO60814 126 aa4.51□□□□□ -1.69
CDH3-209ENST00000569080 HIST1H2BJP06899 126 aa4.51□□□□□ -1.69
CDH3-209ENST00000569080 HIST1H2BOP23527 126 aa4.51□□□□□ -1.69
CDH3-209ENST00000569080 HIST1H2BBP33778 126 aa4.51□□□□□ -1.69
CDH3-209ENST00000569080 NMUP48645 174 aa4.51□□□□□ -1.69
CDH3-209ENST00000569080 HIST1H2BDP58876 126 aa4.51□□□□□ -1.69
CDH3-209ENST00000569080 HIST1H2BCP62807 126 aa4.51□□□□□ -1.69
CDH3-209ENST00000569080 HIST2H2BEQ16778 126 aa4.51□□□□□ -1.69
CDH3-209ENST00000569080 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.51□□□□□ -1.69
CDH3-209ENST00000569080 SOSTDC1Q6X4U4 206 aa4.51□□□□□ -1.69
CDH3-209ENST00000569080 SMCR5Q8TEV8 140 aa4.51□□□□□ -1.69
CDH3-209ENST00000569080 HIST1H2BHQ93079 126 aa4.51□□□□□ -1.69
CDH3-209ENST00000569080 HIST1H2BNQ99877 126 aa4.51□□□□□ -1.69
CDH3-209ENST00000569080 HIST1H2BMQ99879 126 aa4.51□□□□□ -1.69
CDH3-209ENST00000569080 MAP1LC3CQ9BXW4 147 aa4.51□□□□□ -1.69
CDH3-209ENST00000569080 TRBV10-2A0A0K0K1G8 114 aa4.5□□□□□ -1.69
CDH3-209ENST00000569080 E9PLD3 99 aa4.5□□□□□ -1.69
CDH3-209ENST00000569080 ATP6V1G1O75348 118 aa4.5□□□□□ -1.69
CDH3-209ENST00000569080 HERVK_113P61574 105 aa4.5□□□□□ -1.69
CDH3-209ENST00000569080 RETNLBQ9BQ08 111 aa4.5□□□□□ -1.69
CDH3-209ENST00000569080 A0A0J9YXY3 114 aa4.49□□□□□ -1.69
CDH3-209ENST00000569080 B5MCH6 92 aa4.49□□□□□ -1.69
CDH3-209ENST00000569080 SYS1-DBNDD2H3BUS1 97 aa4.49□□□□□ -1.69
CDH3-209ENST00000569080 LGALS3P17931 250 aaKnown RBP4.49□□□□□ -1.69
CDH3-209ENST00000569080 CTAG1AP78358 180 aa4.49□□□□□ -1.69
CDH3-209ENST00000569080 LINC00483Q53H64 154 aa4.49□□□□□ -1.69
CDH3-209ENST00000569080 ADAMTSL4-AS1Q5T5F5 129 aa4.49□□□□□ -1.69
CDH3-209ENST00000569080 LITAFQ99732 161 aa4.49□□□□□ -1.69
CDH3-209ENST00000569080 SPANXB1Q9NS25 103 aaPredicted RBP4.49□□□□□ -1.69
CDH3-209ENST00000569080 ETDCA0A1B0GVM5 59 aa4.48□□□□□ -1.69
CDH3-209ENST00000569080 ERC2-IT1O76042 136 aa4.48□□□□□ -1.69
CDH3-209ENST00000569080 NDUFC2O95298 119 aa4.48□□□□□ -1.69
CDH3-209ENST00000569080 IGLV6-57P01721 117 aa4.48□□□□□ -1.69
CDH3-209ENST00000569080 DDTP30046 118 aa4.48□□□□□ -1.69
CDH3-209ENST00000569080 TPRXLQ17RH7 258 aa4.48□□□□□ -1.69
CDH3-209ENST00000569080 LINC01545Q5VT33 79 aa4.48□□□□□ -1.69
CDH3-209ENST00000569080 Q9BRP9 147 aa4.48□□□□□ -1.69
CDH3-209ENST00000569080 ZNF706Q9Y5V0 76 aaPredicted RBP4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms