RNA–Protein interactions for RNA: ENST00000568566.5

TSC2-223, Transcript of TSC complex subunit 2, human

TSL 3

Gene TSC2, Length 542 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TSC2-223	ENST00000568566	ZNF625	Q96I27	306 aa	Predicted RBP	5.25	□□□□□ -1.57
TSC2-223	ENST00000568566	TRAV16	A0A0A6YYK6	109 aa	Predicted RBP	5.24	□□□□□ -1.57
TSC2-223	ENST00000568566	NDUFA1	O15239	70 aa		5.24	□□□□□ -1.57
TSC2-223	ENST00000568566	DDT	P30046	118 aa		5.24	□□□□□ -1.57
TSC2-223	ENST00000568566	NMU	P48645	174 aa		5.24	□□□□□ -1.57
TSC2-223	ENST00000568566	PTTG1IP	P53801	180 aa		5.24	□□□□□ -1.57
TSC2-223	ENST00000568566	RPL18A	Q02543	176 aa	Known RBP	5.24	□□□□□ -1.57
TSC2-223	ENST00000568566	GAGE2E	Q4V326	116 aa		5.24	□□□□□ -1.57
TSC2-223	ENST00000568566	KRTAP11-1	Q8IUC1	163 aa		5.24	□□□□□ -1.57
TSC2-223	ENST00000568566		Q8IZM0	81 aa		5.24	□□□□□ -1.57
TSC2-223	ENST00000568566	DPH3	Q96FX2	82 aa		5.24	□□□□□ -1.57
TSC2-223	ENST00000568566	GAGE2D	Q9UEU5	116 aa		5.24	□□□□□ -1.57
TSC2-223	ENST00000568566	C9orf129	Q5T035	196 aa	Known RBP	5.23	□□□□□ -1.57
TSC2-223	ENST00000568566	STPG4	Q8N801	248 aa		5.23	□□□□□ -1.57
TSC2-223	ENST00000568566	XAGE1A	Q9HD64	81 aa		5.23	□□□□□ -1.57
TSC2-223	ENST00000568566	LOC107984640	A0A0U1RRK4	108 aa		5.22	□□□□□ -1.57
TSC2-223	ENST00000568566	LEPROT	O15243	131 aa		5.22	□□□□□ -1.57
TSC2-223	ENST00000568566	PRSS2	P07478	247 aa		5.22	□□□□□ -1.57
TSC2-223	ENST00000568566	CKS1B	P61024	79 aa		5.22	□□□□□ -1.57
TSC2-223	ENST00000568566	RNF151	Q2KHN1	245 aa		5.22	□□□□□ -1.57
TSC2-223	ENST00000568566	ANKRD39	Q53RE8	183 aa		5.22	□□□□□ -1.57
TSC2-223	ENST00000568566		Q8NDZ9	215 aa		5.22	□□□□□ -1.57
TSC2-223	ENST00000568566	TTTY13	Q9BZ97	58 aa		5.22	□□□□□ -1.57
TSC2-223	ENST00000568566	HIGD1B	Q9P298	99 aa		5.22	□□□□□ -1.57
TSC2-223	ENST00000568566	IGKV2D-26	A0A0A0MRZ7	120 aa		5.21	□□□□□ -1.58
TSC2-223	ENST00000568566		A0A0U1RRA0	63 aa		5.21	□□□□□ -1.58
TSC2-223	ENST00000568566	LINC00587	B1AMM8	73 aa		5.21	□□□□□ -1.58
TSC2-223	ENST00000568566		J3QQQ9	107 aa		5.21	□□□□□ -1.58
TSC2-223	ENST00000568566	LGALS3	P17931	250 aa	Known RBP	5.21	□□□□□ -1.58
TSC2-223	ENST00000568566	PHF5A	Q7RTV0	110 aa	Known RBP	5.21	□□□□□ -1.58
TSC2-223	ENST00000568566	PRO1933	Q9H354	126 aa		5.21	□□□□□ -1.58
TSC2-223	ENST00000568566	PLAC8	Q9NZF1	115 aa		5.21	□□□□□ -1.58
TSC2-223	ENST00000568566	TRBV30	A0A0K0K1B3	111 aa		5.2	□□□□□ -1.58
TSC2-223	ENST00000568566	MYMX	A0A1B0GTQ4	84 aa		5.2	□□□□□ -1.58
TSC2-223	ENST00000568566	PFN2	P35080	140 aa		5.2	□□□□□ -1.58
TSC2-223	ENST00000568566	C14orf144	Q96I85	54 aa		5.2	□□□□□ -1.58
TSC2-223	ENST00000568566	PCP4L1	A6NKN8	68 aa		5.19	□□□□□ -1.58
TSC2-223	ENST00000568566		F8WDY8	70 aa		5.19	□□□□□ -1.58
TSC2-223	ENST00000568566		M0R143	59 aa		5.19	□□□□□ -1.58
TSC2-223	ENST00000568566	TLX1NB	P0CAT3	122 aa		5.19	□□□□□ -1.58
TSC2-223	ENST00000568566	CXCL5	P42830	114 aa		5.19	□□□□□ -1.58
TSC2-223	ENST00000568566	HERV-K104	P63124	156 aa		5.19	□□□□□ -1.58
TSC2-223	ENST00000568566	TAL2	Q16559	108 aa		5.19	□□□□□ -1.58
TSC2-223	ENST00000568566	LBH	Q53QV2	105 aa	Predicted RBP	5.19	□□□□□ -1.58
TSC2-223	ENST00000568566	FAM19A5	Q7Z5A7	132 aa	Predicted RBP	5.19	□□□□□ -1.58
TSC2-223	ENST00000568566	COPS9	Q8WXC6	57 aa		5.19	□□□□□ -1.58
TSC2-223	ENST00000568566	ZNF815P	A8K554	130 aa		5.18	□□□□□ -1.58
TSC2-223	ENST00000568566	NDUFC2-KCTD14	E9PQ53	114 aa		5.18	□□□□□ -1.58
TSC2-223	ENST00000568566	EIF4EBP3	O60516	100 aa	Predicted RBP	5.18	□□□□□ -1.58
TSC2-223	ENST00000568566	SMIM13	P0DJ93	91 aa		5.18	□□□□□ -1.58
TSC2-223	ENST00000568566	SCGB1D4	Q6XE38	83 aa		5.18	□□□□□ -1.58
TSC2-223	ENST00000568566		Q6ZVH6	145 aa		5.18	□□□□□ -1.58
TSC2-223	ENST00000568566	TP73-AS1	Q9UF72	201 aa		5.18	□□□□□ -1.58
TSC2-223	ENST00000568566	TMEM238	C9JI98	176 aa		5.17	□□□□□ -1.58
TSC2-223	ENST00000568566	TIMM17B	O60830	172 aa		5.17	□□□□□ -1.58
TSC2-223	ENST00000568566	HSD52	Q0P140	79 aa		5.17	□□□□□ -1.58
TSC2-223	ENST00000568566	PCP2	Q8IVA1	136 aa		5.17	□□□□□ -1.58
TSC2-223	ENST00000568566	DAND5	Q8N907	189 aa		5.17	□□□□□ -1.58
TSC2-223	ENST00000568566	SPANXB1	Q9NS25	103 aa	Predicted RBP	5.17	□□□□□ -1.58
TSC2-223	ENST00000568566	NDUFA12	Q9UI09	145 aa		5.17	□□□□□ -1.58
TSC2-223	ENST00000568566	ERG28	Q9UKR5	140 aa		5.17	□□□□□ -1.58
TSC2-223	ENST00000568566		A0A0J9YXY3	114 aa		5.16	□□□□□ -1.58
TSC2-223	ENST00000568566	PRR3	P79522	188 aa	Known RBP	5.16	□□□□□ -1.58
TSC2-223	ENST00000568566	ADAMTSL4-AS1	Q5T5F5	129 aa		5.16	□□□□□ -1.58
TSC2-223	ENST00000568566	LINC01600	Q96MT4	127 aa		5.16	□□□□□ -1.58
TSC2-223	ENST00000568566	PPDPF	Q9H3Y8	114 aa		5.16	□□□□□ -1.58
TSC2-223	ENST00000568566	SND1-IT1	Q9HBX3	110 aa		5.16	□□□□□ -1.58
TSC2-223	ENST00000568566	TMEM238L	A0A1B0GVL6	79 aa		5.15	□□□□□ -1.59
TSC2-223	ENST00000568566	LINC00158	P58513	81 aa		5.15	□□□□□ -1.59
TSC2-223	ENST00000568566	GAGE10	A6NGK3	116 aa		5.14	□□□□□ -1.59
TSC2-223	ENST00000568566	IFITM1	P13164	125 aa		5.14	□□□□□ -1.59
TSC2-223	ENST00000568566	CTAG1A	P78358	180 aa		5.14	□□□□□ -1.59
TSC2-223	ENST00000568566	COX17	Q14061	63 aa		5.14	□□□□□ -1.59
TSC2-223	ENST00000568566	SOSTDC1	Q6X4U4	206 aa		5.14	□□□□□ -1.59
TSC2-223	ENST00000568566	C2orf91	Q6ZV80	131 aa		5.14	□□□□□ -1.59
TSC2-223	ENST00000568566	MIR7-3HG	Q8N6C7	128 aa		5.14	□□□□□ -1.59
TSC2-223	ENST00000568566	C7orf33	Q8WU49	177 aa		5.14	□□□□□ -1.59
TSC2-223	ENST00000568566	C22orf24	Q9Y442	160 aa		5.14	□□□□□ -1.59
TSC2-223	ENST00000568566	LPA	P08519	4548 aa		5.14	□□□□□ -1.59
TSC2-223	ENST00000568566		A6NDN8	102 aa		5.13	□□□□□ -1.59
TSC2-223	ENST00000568566	RPL37AP8	A6NKH3	93 aa		5.13	□□□□□ -1.59
TSC2-223	ENST00000568566		M0QXV9	152 aa		5.13	□□□□□ -1.59
TSC2-223	ENST00000568566	NPC2	P61916	151 aa		5.13	□□□□□ -1.59
TSC2-223	ENST00000568566	SRSF9	Q13242	221 aa	Known RBP eCLIP	5.13	□□□□□ -1.59
TSC2-223	ENST00000568566	HIST1H4G	Q99525	98 aa		5.13	□□□□□ -1.59
TSC2-223	ENST00000568566	LITAF	Q99732	161 aa		5.13	□□□□□ -1.59
TSC2-223	ENST00000568566	VPREB1	P12018	145 aa		5.12	□□□□□ -1.59
TSC2-223	ENST00000568566	RPL24	P83731	157 aa	Known RBP	5.12	□□□□□ -1.59
TSC2-223	ENST00000568566	MEIG1	Q5JSS6	88 aa		5.12	□□□□□ -1.59
TSC2-223	ENST00000568566	LINC00167	Q96N53	147 aa		5.12	□□□□□ -1.59
TSC2-223	ENST00000568566	SPANXD	Q9BXN6	97 aa		5.12	□□□□□ -1.59
TSC2-223	ENST00000568566	SPANXC	Q9NY87	97 aa		5.12	□□□□□ -1.59
TSC2-223	ENST00000568566	LINC00474	Q9P2X8	69 aa		5.12	□□□□□ -1.59
TSC2-223	ENST00000568566	PSORS1C2	Q9UIG4	136 aa		5.12	□□□□□ -1.59
TSC2-223	ENST00000568566	COL5A1-AS1	Q5SY13	56 aa		5.11	□□□□□ -1.59
TSC2-223	ENST00000568566	BVES-AS1	Q5T3Y7	98 aa		5.11	□□□□□ -1.59
TSC2-223	ENST00000568566	CEND1	Q8N111	149 aa		5.11	□□□□□ -1.59
TSC2-223	ENST00000568566	MUC2	Q02817	5179 aa		5.1	□□□□□ -1.59
TSC2-223	ENST00000568566	KRTAP10-8	P60410	259 aa		5.1	□□□□□ -1.59
TSC2-223	ENST00000568566	PKIG	Q9Y2B9	76 aa		5.1	□□□□□ -1.59

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