RNA–Protein interactions for RNA: ENST00000568291.2

SF3B3-211, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,067 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-211ENST00000568291 TMEM223A0PJW6 202 aa5.76□□□□□ -1.49
SF3B3-211ENST00000568291 ATP6V1G1O75348 118 aa5.76□□□□□ -1.49
SF3B3-211ENST00000568291 MRPL55Q7Z7F7 128 aaKnown RBP5.76□□□□□ -1.49
SF3B3-211ENST00000568291 Q8NDZ9 215 aa5.76□□□□□ -1.49
SF3B3-211ENST00000568291 LINC00167Q96N53 147 aa5.76□□□□□ -1.49
SF3B3-211ENST00000568291 ERG28Q9UKR5 140 aa5.76□□□□□ -1.49
SF3B3-211ENST00000568291 TRAV12-1A0A0B4J245 112 aa5.75□□□□□ -1.49
SF3B3-211ENST00000568291 LEPROTL1O95214 131 aa5.75□□□□□ -1.49
SF3B3-211ENST00000568291 KRTAP10-8P60410 259 aa5.75□□□□□ -1.49
SF3B3-211ENST00000568291 PRR26Q8N8Z3 221 aa5.75□□□□□ -1.49
SF3B3-211ENST00000568291 SND1-IT1Q9HBX3 110 aa5.75□□□□□ -1.49
SF3B3-211ENST00000568291 LINC00158P58513 81 aa5.74□□□□□ -1.49
SF3B3-211ENST00000568291 LBHQ53QV2 105 aaPredicted RBP5.74□□□□□ -1.49
SF3B3-211ENST00000568291 ANKRD39Q53RE8 183 aa5.74□□□□□ -1.49
SF3B3-211ENST00000568291 IGKV2-28A0A075B6P5 120 aa5.73□□□□□ -1.49
SF3B3-211ENST00000568291 H0Y9J4 135 aa5.73□□□□□ -1.49
SF3B3-211ENST00000568291 HIST1H2BKO60814 126 aa5.73□□□□□ -1.49
SF3B3-211ENST00000568291 IGKV2D-28P01615 120 aa5.73□□□□□ -1.49
SF3B3-211ENST00000568291 HIST1H2BJP06899 126 aa5.73□□□□□ -1.49
SF3B3-211ENST00000568291 SMIM13P0DJ93 91 aa5.73□□□□□ -1.49
SF3B3-211ENST00000568291 HIST1H2BOP23527 126 aa5.73□□□□□ -1.49
SF3B3-211ENST00000568291 HIST1H2BBP33778 126 aa5.73□□□□□ -1.49
SF3B3-211ENST00000568291 HIST1H2BDP58876 126 aa5.73□□□□□ -1.49
SF3B3-211ENST00000568291 TSPEAR-AS2P59090 65 aa5.73□□□□□ -1.49
SF3B3-211ENST00000568291 HIST1H2BCP62807 126 aa5.73□□□□□ -1.49
SF3B3-211ENST00000568291 HIST2H2BEQ16778 126 aa5.73□□□□□ -1.49
SF3B3-211ENST00000568291 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.73□□□□□ -1.49
SF3B3-211ENST00000568291 HIST1H2BHQ93079 126 aa5.73□□□□□ -1.49
SF3B3-211ENST00000568291 DIRC1Q969H9 104 aa5.73□□□□□ -1.49
SF3B3-211ENST00000568291 HIST1H2BNQ99877 126 aa5.73□□□□□ -1.49
SF3B3-211ENST00000568291 HIST1H2BMQ99879 126 aa5.73□□□□□ -1.49
SF3B3-211ENST00000568291 S100A1P23297 94 aa5.72□□□□□ -1.49
SF3B3-211ENST00000568291 NKAPP1Q8N9T2 125 aa5.72□□□□□ -1.49
SF3B3-211ENST00000568291 TMEM238C9JI98 176 aa5.71□□□□□ -1.5
SF3B3-211ENST00000568291 VPREB1P12018 145 aa5.71□□□□□ -1.5
SF3B3-211ENST00000568291 ANAPC11Q9NYG5 84 aa5.71□□□□□ -1.5
SF3B3-211ENST00000568291 TP73-AS1Q9UF72 201 aa5.71□□□□□ -1.5
SF3B3-211ENST00000568291 IGLV5-37A0A075B6J1 123 aa5.7□□□□□ -1.5
SF3B3-211ENST00000568291 ZNF861PO60384 105 aa5.7□□□□□ -1.5
SF3B3-211ENST00000568291 KRTAP1-4P0C5Y4 121 aa5.7□□□□□ -1.5
SF3B3-211ENST00000568291 MEIG1Q5JSS6 88 aa5.7□□□□□ -1.5
SF3B3-211ENST00000568291 DAND5Q8N907 189 aa5.7□□□□□ -1.5
SF3B3-211ENST00000568291 NDUFA12Q9UI09 145 aa5.7□□□□□ -1.5
SF3B3-211ENST00000568291 HSPB8Q9UJY1 196 aa5.7□□□□□ -1.5
SF3B3-211ENST00000568291 BCE1O60756 84 aa5.69□□□□□ -1.5
SF3B3-211ENST00000568291 DPM2O94777 84 aa5.69□□□□□ -1.5
SF3B3-211ENST00000568291 COX17Q14061 63 aa5.69□□□□□ -1.5
SF3B3-211ENST00000568291 MIR7-3HGQ8N6C7 128 aa5.69□□□□□ -1.5
SF3B3-211ENST00000568291 IGLV1-50A0A075B6I6 118 aa5.68□□□□□ -1.5
SF3B3-211ENST00000568291 IGKCP01834 107 aa5.68□□□□□ -1.5
SF3B3-211ENST00000568291 PRLHP81277 87 aa5.68□□□□□ -1.5
SF3B3-211ENST00000568291 MAP1LC3CQ9BXW4 147 aa5.68□□□□□ -1.5
SF3B3-211ENST00000568291 KRTAP9-9Q9BYP9 154 aa5.68□□□□□ -1.5
SF3B3-211ENST00000568291 KRTAP9-4Q9BYQ2 154 aa5.68□□□□□ -1.5
SF3B3-211ENST00000568291 H3BS24 57 aa5.67□□□□□ -1.5
SF3B3-211ENST00000568291 J3QQQ9 107 aa5.67□□□□□ -1.5
SF3B3-211ENST00000568291 NCR3O14931 201 aa5.67□□□□□ -1.5
SF3B3-211ENST00000568291 LEPROTO15243 131 aa5.67□□□□□ -1.5
SF3B3-211ENST00000568291 PLNP26678 52 aa5.67□□□□□ -1.5
SF3B3-211ENST00000568291 UBE2AP49459 152 aa5.67□□□□□ -1.5
SF3B3-211ENST00000568291 BOD1L2Q8IYS8 172 aa5.67□□□□□ -1.5
SF3B3-211ENST00000568291 MYMXA0A1B0GTQ4 84 aa5.66□□□□□ -1.5
SF3B3-211ENST00000568291 SYS1-DBNDD2H3BUS1 97 aa5.66□□□□□ -1.5
SF3B3-211ENST00000568291 M0R378 163 aa5.66□□□□□ -1.5
SF3B3-211ENST00000568291 RPL28P46779 137 aaKnown RBP5.66□□□□□ -1.5
SF3B3-211ENST00000568291 RPL24P83731 157 aaKnown RBP5.66□□□□□ -1.5
SF3B3-211ENST00000568291 FAM19A1Q7Z5A9 133 aa5.66□□□□□ -1.5
SF3B3-211ENST00000568291 TMEM126AQ9H061 195 aa5.66□□□□□ -1.5
SF3B3-211ENST00000568291 LGALS3P17931 250 aaKnown RBP5.65□□□□□ -1.5
SF3B3-211ENST00000568291 NPC2P61916 151 aa5.65□□□□□ -1.5
SF3B3-211ENST00000568291 SFTA2Q6UW10 78 aa5.65□□□□□ -1.5
SF3B3-211ENST00000568291 PLEKHB2Q96CS7 222 aa5.65□□□□□ -1.5
SF3B3-211ENST00000568291 A0A087X002 238 aa5.64□□□□□ -1.51
SF3B3-211ENST00000568291 C3orf79P0CE67 100 aa5.64□□□□□ -1.51
SF3B3-211ENST00000568291 HERVK_113P61574 105 aa5.64□□□□□ -1.51
SF3B3-211ENST00000568291 HERV-K104P63124 156 aa5.64□□□□□ -1.51
SF3B3-211ENST00000568291 KRTAP13-1Q8IUC0 172 aa5.64□□□□□ -1.51
SF3B3-211ENST00000568291 TTTY13Q9BZ97 58 aa5.64□□□□□ -1.51
SF3B3-211ENST00000568291 KRTDAPP60985 99 aa5.63□□□□□ -1.51
SF3B3-211ENST00000568291 ADAMTSL4-AS1Q5T5F5 129 aa5.63□□□□□ -1.51
SF3B3-211ENST00000568291 IGKV2D-26A0A0A0MRZ7 120 aa5.62□□□□□ -1.51
SF3B3-211ENST00000568291 TSPAN13O95857 204 aa5.62□□□□□ -1.51
SF3B3-211ENST00000568291 LINC01545Q5VT33 79 aa5.62□□□□□ -1.51
SF3B3-211ENST00000568291 A0A0J9YXY3 114 aa5.61□□□□□ -1.51
SF3B3-211ENST00000568291 TRBV10-3A0A0K0K1G6 114 aa5.61□□□□□ -1.51
SF3B3-211ENST00000568291 E9PLD3 99 aa5.61□□□□□ -1.51
SF3B3-211ENST00000568291 PET117Q6UWS5 81 aa5.61□□□□□ -1.51
SF3B3-211ENST00000568291 SOSTDC1Q6X4U4 206 aa5.61□□□□□ -1.51
SF3B3-211ENST00000568291 ATOH7Q8N100 152 aa5.61□□□□□ -1.51
SF3B3-211ENST00000568291 HIGD2AQ9BW72 106 aa5.61□□□□□ -1.51
SF3B3-211ENST00000568291 KRTAP13-2Q52LG2 175 aa5.6□□□□□ -1.51
SF3B3-211ENST00000568291 COA6Q5JTJ3 125 aaKnown RBP5.6□□□□□ -1.51
SF3B3-211ENST00000568291 KRTAP4-8A0A0G2JLE6 195 aa5.59□□□□□ -1.51
SF3B3-211ENST00000568291 LINC00587B1AMM8 73 aa5.59□□□□□ -1.51
SF3B3-211ENST00000568291 CRYGAP11844 174 aa5.59□□□□□ -1.51
SF3B3-211ENST00000568291 NMUP48645 174 aa5.59□□□□□ -1.51
SF3B3-211ENST00000568291 LPAP08519 4548 aa5.58□□□□□ -1.52
SF3B3-211ENST00000568291 RPL13AP40429 203 aaKnown RBP5.58□□□□□ -1.52
SF3B3-211ENST00000568291 TYMSOSQ8TAI1 123 aa5.58□□□□□ -1.52
SF3B3-211ENST00000568291 ZNF815PA8K554 130 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 120.3 ms