RNA–Protein interactions for RNA: ENST00000567817.5

CAPN3-217, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-217ENST00000567817 CSNK1G2-AS1Q8NCQ2 148 aa3.66□□□□□ -1.82
CAPN3-217ENST00000567817 LINC00308Q8TCZ7 52 aa3.66□□□□□ -1.82
CAPN3-217ENST00000567817 UBE2WQ96B02 151 aa3.66□□□□□ -1.82
CAPN3-217ENST00000567817 ZNF625Q96I27 306 aaPredicted RBP3.66□□□□□ -1.82
CAPN3-217ENST00000567817 TRAV13-1A0A0B4J241 112 aa3.65□□□□□ -1.83
CAPN3-217ENST00000567817 PLAC8L1A1L4L8 177 aa3.65□□□□□ -1.83
CAPN3-217ENST00000567817 IBA57-AS1B1ANH7 110 aa3.65□□□□□ -1.83
CAPN3-217ENST00000567817 F5H768 121 aa3.65□□□□□ -1.83
CAPN3-217ENST00000567817 H7C2G1 150 aa3.65□□□□□ -1.83
CAPN3-217ENST00000567817 COX7A2LO14548 114 aa3.65□□□□□ -1.83
CAPN3-217ENST00000567817 GIG44P09565 113 aaPredicted RBP3.65□□□□□ -1.83
CAPN3-217ENST00000567817 C14orf177Q52M58 125 aa3.65□□□□□ -1.83
CAPN3-217ENST00000567817 RNASE13Q5GAN3 156 aaKnown RBP3.65□□□□□ -1.83
CAPN3-217ENST00000567817 ADAMTSL4-AS1Q5T5F5 129 aa3.65□□□□□ -1.83
CAPN3-217ENST00000567817 Q6Q795 121 aa3.65□□□□□ -1.83
CAPN3-217ENST00000567817 NTM-AS1Q6ZSK4 140 aa3.65□□□□□ -1.83
CAPN3-217ENST00000567817 A0A087WZ39 114 aa3.64□□□□□ -1.83
CAPN3-217ENST00000567817 TRAV8-4A0A0B4J246 113 aa3.64□□□□□ -1.83
CAPN3-217ENST00000567817 LYRM9A8MSI8 78 aa3.64□□□□□ -1.83
CAPN3-217ENST00000567817 SNCGO76070 127 aa3.64□□□□□ -1.83
CAPN3-217ENST00000567817 CRPP02741 224 aa3.64□□□□□ -1.83
CAPN3-217ENST00000567817 PRM2P04554 102 aa3.64□□□□□ -1.83
CAPN3-217ENST00000567817 INAFM2P0DMQ5 153 aa3.64□□□□□ -1.83
CAPN3-217ENST00000567817 CXCL5P42830 114 aa3.64□□□□□ -1.83
CAPN3-217ENST00000567817 APOC4P55056 127 aa3.64□□□□□ -1.83
CAPN3-217ENST00000567817 LCE1FQ5T754 118 aa3.64□□□□□ -1.83
CAPN3-217ENST00000567817 C9orf66Q5T8R8 295 aa3.64□□□□□ -1.83
CAPN3-217ENST00000567817 NOTCH2NLQ7Z3S9 236 aa3.64□□□□□ -1.83
CAPN3-217ENST00000567817 COX7B2Q8TF08 81 aa3.64□□□□□ -1.83
CAPN3-217ENST00000567817 Q9UF83 564 aa3.64□□□□□ -1.83
CAPN3-217ENST00000567817 AGRNO00468 2067 aa3.64□□□□□ -1.83
CAPN3-217ENST00000567817 IGHV3OR16-9A0A0B4J2B5 98 aa3.63□□□□□ -1.83
CAPN3-217ENST00000567817 H0YGX0 51 aa3.63□□□□□ -1.83
CAPN3-217ENST00000567817 RPL35AP18077 110 aaKnown RBP3.63□□□□□ -1.83
CAPN3-217ENST00000567817 RPL28P46779 137 aaKnown RBP3.63□□□□□ -1.83
CAPN3-217ENST00000567817 COX6A2Q02221 97 aa3.63□□□□□ -1.83
CAPN3-217ENST00000567817 SS18Q15532 418 aa3.63□□□□□ -1.83
CAPN3-217ENST00000567817 CHCHD5Q9BSY4 110 aa3.63□□□□□ -1.83
CAPN3-217ENST00000567817 PRO0255Q9UI72 69 aa3.63□□□□□ -1.83
CAPN3-217ENST00000567817 KIAA1109Q2LD37 5005 aa3.63□□□□□ -1.83
CAPN3-217ENST00000567817 KRTAP10-5P60370 271 aa3.62□□□□□ -1.83
CAPN3-217ENST00000567817 COX17Q14061 63 aa3.62□□□□□ -1.83
CAPN3-217ENST00000567817 KRTAP7-1Q8IUC3 87 aa3.62□□□□□ -1.83
CAPN3-217ENST00000567817 IMUPQ9GZP8 106 aa3.62□□□□□ -1.83
CAPN3-217ENST00000567817 CSMD3Q7Z407 3707 aa3.62□□□□□ -1.83
CAPN3-217ENST00000567817 STARD9Q9P2P6 4700 aa3.61□□□□□ -1.83
CAPN3-217ENST00000567817 A0A1B0GX51 115 aa3.61□□□□□ -1.83
CAPN3-217ENST00000567817 DNAL4O96015 105 aa3.61□□□□□ -1.83
CAPN3-217ENST00000567817 XGP55808 180 aa3.61□□□□□ -1.83
CAPN3-217ENST00000567817 CKS1BP61024 79 aa3.61□□□□□ -1.83
CAPN3-217ENST00000567817 Q8IZM0 81 aa3.61□□□□□ -1.83
CAPN3-217ENST00000567817 SND1-IT1Q9HBX3 110 aa3.61□□□□□ -1.83
CAPN3-217ENST00000567817 HUWE1Q7Z6Z7 4374 aaKnown RBP3.6□□□□□ -1.83
CAPN3-217ENST00000567817 TEX49A0A1B0GTD5 131 aa3.6□□□□□ -1.83
CAPN3-217ENST00000567817 LINC00959A0A1B0GUT2 108 aa3.6□□□□□ -1.83
CAPN3-217ENST00000567817 MT-ATP8P03928 68 aa3.6□□□□□ -1.83
CAPN3-217ENST00000567817 MIFP14174 115 aa3.6□□□□□ -1.83
CAPN3-217ENST00000567817 LINC00158P58513 81 aa3.6□□□□□ -1.83
CAPN3-217ENST00000567817 NPC2P61916 151 aa3.6□□□□□ -1.83
CAPN3-217ENST00000567817 CD164L2Q6UWJ8 174 aa3.6□□□□□ -1.83
CAPN3-217ENST00000567817 MIR7-3HGQ8N6C7 128 aa3.6□□□□□ -1.83
CAPN3-217ENST00000567817 DAND5Q8N907 189 aa3.6□□□□□ -1.83
CAPN3-217ENST00000567817 FRAS1Q86XX4 4008 aa3.59□□□□□ -1.83
CAPN3-217ENST00000567817 H3BQ85 93 aa3.59□□□□□ -1.83
CAPN3-217ENST00000567817 NDUFC2O95298 119 aa3.59□□□□□ -1.83
CAPN3-217ENST00000567817 ATP5G1P05496 136 aa3.59□□□□□ -1.83
CAPN3-217ENST00000567817 DEFB130BP0DP73 79 aa3.59□□□□□ -1.83
CAPN3-217ENST00000567817 DEFB130AP0DP74 79 aa3.59□□□□□ -1.83
CAPN3-217ENST00000567817 KRTAP10-12P60413 245 aa3.59□□□□□ -1.83
CAPN3-217ENST00000567817 C6orf226Q5I0X4 101 aa3.59□□□□□ -1.83
CAPN3-217ENST00000567817 TTC32Q5I0X7 151 aa3.59□□□□□ -1.83
CAPN3-217ENST00000567817 SOSTDC1Q6X4U4 206 aa3.59□□□□□ -1.83
CAPN3-217ENST00000567817 LINC00643Q86TS7 51 aa3.59□□□□□ -1.83
CAPN3-217ENST00000567817 CLEC2BQ92478 149 aa3.59□□□□□ -1.83
CAPN3-217ENST00000567817 TM2D3Q9BRN9 247 aa3.59□□□□□ -1.83
CAPN3-217ENST00000567817 WFDC10AQ9H1F0 79 aa3.59□□□□□ -1.83
CAPN3-217ENST00000567817 TOMM7Q9P0U1 55 aa3.59□□□□□ -1.83
CAPN3-217ENST00000567817 ALMS1Q8TCU4 4167 aa3.59□□□□□ -1.84
CAPN3-217ENST00000567817 IGLV4-60A0A075B6I1 120 aa3.58□□□□□ -1.84
CAPN3-217ENST00000567817 TRBV7-7A0A0K0K1E9 115 aa3.58□□□□□ -1.84
CAPN3-217ENST00000567817 LOC100131303A0A0U1RQF7 123 aa3.58□□□□□ -1.84
CAPN3-217ENST00000567817 BAALC-AS2P0C853 105 aa3.58□□□□□ -1.84
CAPN3-217ENST00000567817 SPART-AS1P0CW21 52 aa3.58□□□□□ -1.84
CAPN3-217ENST00000567817 CFAP161Q6P656 301 aa3.58□□□□□ -1.84
CAPN3-217ENST00000567817 ANAPC13Q9BS18 74 aa3.58□□□□□ -1.84
CAPN3-217ENST00000567817 HECTD4Q9Y4D8 3996 aa3.58□□□□□ -1.84
CAPN3-217ENST00000567817 A0A087X002 238 aa3.57□□□□□ -1.84
CAPN3-217ENST00000567817 A0A0U1RRA0 63 aa3.57□□□□□ -1.84
CAPN3-217ENST00000567817 NACAE9PAV3 2078 aa3.57□□□□□ -1.84
CAPN3-217ENST00000567817 H3BNG1 76 aa3.57□□□□□ -1.84
CAPN3-217ENST00000567817 CCL18P55774 89 aa3.57□□□□□ -1.84
CAPN3-217ENST00000567817 DAD1P61803 113 aa3.57□□□□□ -1.84
CAPN3-217ENST00000567817 S100A7L2Q5SY68 101 aa3.57□□□□□ -1.84
CAPN3-217ENST00000567817 LELP1Q5T871 98 aa3.57□□□□□ -1.84
CAPN3-217ENST00000567817 C15orf53Q8NAA6 179 aa3.57□□□□□ -1.84
CAPN3-217ENST00000567817 TMEM126AQ9H061 195 aa3.57□□□□□ -1.84
CAPN3-217ENST00000567817 ABCA13Q86UQ4 5058 aa3.57□□□□□ -1.84
CAPN3-217ENST00000567817 IGKV2-28A0A075B6P5 120 aa3.56□□□□□ -1.84
CAPN3-217ENST00000567817 IGKV3OR2-268A0A0C4DH90 116 aa3.56□□□□□ -1.84
CAPN3-217ENST00000567817 JMJD7-PLA2G4BH0Y9G9 81 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms