RNA–Protein interactions for RNA: ENST00000567712.1

CNEP1R1-209, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 4

Gene CNEP1R1, Length 455 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-209ENST00000567712 SEC11CQ9BY50 192 aa12.97□□□□□ -0.33
CNEP1R1-209ENST00000567712 COX17Q14061 63 aa12.96□□□□□ -0.33
CNEP1R1-209ENST00000567712 KRTAP13-3Q3SY46 172 aa12.96□□□□□ -0.33
CNEP1R1-209ENST00000567712 URB1-AS1Q96HZ7 61 aa12.96□□□□□ -0.33
CNEP1R1-209ENST00000567712 DAND5Q8N907 189 aa12.95□□□□□ -0.34
CNEP1R1-209ENST00000567712 SMCO4Q9NRQ5 59 aa12.95□□□□□ -0.34
CNEP1R1-209ENST00000567712 SPAG11AQ6PDA7 123 aa12.94□□□□□ -0.34
CNEP1R1-209ENST00000567712 C11orf86A6NJI1 115 aa12.93□□□□□ -0.34
CNEP1R1-209ENST00000567712 FP248Q71RG6 208 aaPredicted RBP12.92□□□□□ -0.34
CNEP1R1-209ENST00000567712 Q8NBF4 154 aa12.92□□□□□ -0.34
CNEP1R1-209ENST00000567712 FABP9Q0Z7S8 132 aa12.91□□□□□ -0.34
CNEP1R1-209ENST00000567712 PMCHL1Q16048 86 aa12.91□□□□□ -0.34
CNEP1R1-209ENST00000567712 ASB16-AS1Q495Z4 193 aa12.91□□□□□ -0.34
CNEP1R1-209ENST00000567712 COMMD7Q86VX2 200 aa12.9□□□□□ -0.34
CNEP1R1-209ENST00000567712 A0A0U1RRA0 63 aa12.89□□□□□ -0.35
CNEP1R1-209ENST00000567712 LINC00337Q8N6G1 96 aa12.88□□□□□ -0.35
CNEP1R1-209ENST00000567712 LINC00158P58513 81 aa12.87□□□□□ -0.35
CNEP1R1-209ENST00000567712 TMEM170BQ5T4T1 132 aa12.87□□□□□ -0.35
CNEP1R1-209ENST00000567712 S100PP25815 95 aa12.86□□□□□ -0.35
CNEP1R1-209ENST00000567712 C4orf48Q5BLP8 95 aa12.86□□□□□ -0.35
CNEP1R1-209ENST00000567712 BAGE3Q86Y29 109 aa12.85□□□□□ -0.35
CNEP1R1-209ENST00000567712 C18orf32Q8TCD1 76 aa12.85□□□□□ -0.35
CNEP1R1-209ENST00000567712 SMCR5Q8TEV8 140 aa12.85□□□□□ -0.35
CNEP1R1-209ENST00000567712 KRTAP4-16G5E9R7 235 aaPredicted RBP12.84□□□□□ -0.35
CNEP1R1-209ENST00000567712 HBDP02042 147 aa12.83□□□□□ -0.36
CNEP1R1-209ENST00000567712 LINC00614P0C842 121 aa12.83□□□□□ -0.36
CNEP1R1-209ENST00000567712 SPRR1AP35321 89 aa12.83□□□□□ -0.36
CNEP1R1-209ENST00000567712 ZNF706Q9Y5V0 76 aaPredicted RBP12.83□□□□□ -0.36
CNEP1R1-209ENST00000567712 PRYO14603 147 aa12.82□□□□□ -0.36
CNEP1R1-209ENST00000567712 COX19Q49B96 90 aa12.82□□□□□ -0.36
CNEP1R1-209ENST00000567712 LCE2DQ5TA82 110 aaPredicted RBP12.82□□□□□ -0.36
CNEP1R1-209ENST00000567712 NCR3O14931 201 aa12.81□□□□□ -0.36
CNEP1R1-209ENST00000567712 LINC01547P58512 204 aaPredicted RBP12.81□□□□□ -0.36
CNEP1R1-209ENST00000567712 RHEBQ15382 184 aa12.81□□□□□ -0.36
CNEP1R1-209ENST00000567712 SMIM13P0DJ93 91 aa12.8□□□□□ -0.36
CNEP1R1-209ENST00000567712 SFTA2Q6UW10 78 aa12.8□□□□□ -0.36
CNEP1R1-209ENST00000567712 KCNQ1DNQ9H478 68 aa12.8□□□□□ -0.36
CNEP1R1-209ENST00000567712 RPS10P5Q9NQ39 176 aa12.8□□□□□ -0.36
CNEP1R1-209ENST00000567712 TMEM223A0PJW6 202 aa12.79□□□□□ -0.36
CNEP1R1-209ENST00000567712 SPINK1P00995 79 aa12.79□□□□□ -0.36
CNEP1R1-209ENST00000567712 LINC00483Q53H64 154 aa12.79□□□□□ -0.36
CNEP1R1-209ENST00000567712 BOD1L2Q8IYS8 172 aa12.79□□□□□ -0.36
CNEP1R1-209ENST00000567712 YPEL4Q96NS1 127 aa12.77□□□□□ -0.37
CNEP1R1-209ENST00000567712 CHTOPQ9Y3Y2 248 aaKnown RBP12.77□□□□□ -0.37
CNEP1R1-209ENST00000567712 ERC2-IT1O76042 136 aa12.76□□□□□ -0.37
CNEP1R1-209ENST00000567712 TRBV10-3A0A0K0K1G6 114 aa12.75□□□□□ -0.37
CNEP1R1-209ENST00000567712 SEC61BP60468 96 aaKnown RBP12.75□□□□□ -0.37
CNEP1R1-209ENST00000567712 GAGE2AQ6NT46 116 aa12.75□□□□□ -0.37
CNEP1R1-209ENST00000567712 Q8N377 158 aa12.75□□□□□ -0.37
CNEP1R1-209ENST00000567712 MIR7-3HGQ8N6C7 128 aa12.75□□□□□ -0.37
CNEP1R1-209ENST00000567712 TRAPPC1Q9Y5R8 145 aa12.75□□□□□ -0.37
CNEP1R1-209ENST00000567712 ETDCA0A1B0GVM5 59 aa12.73□□□□□ -0.37
CNEP1R1-209ENST00000567712 MOBPQ13875 183 aa12.73□□□□□ -0.37
CNEP1R1-209ENST00000567712 LCE2CQ5TA81 110 aa12.72□□□□□ -0.37
CNEP1R1-209ENST00000567712 IGLV9-49A0A0B4J1Y8 123 aa12.71□□□□□ -0.37
CNEP1R1-209ENST00000567712 MEIG1Q5JSS6 88 aa12.71□□□□□ -0.37
CNEP1R1-209ENST00000567712 FSIP2Q5CZC0 6907 aa12.71□□□□□ -0.38
CNEP1R1-209ENST00000567712 B5MCH6 92 aa12.7□□□□□ -0.38
CNEP1R1-209ENST00000567712 Q9BRP9 147 aa12.69□□□□□ -0.38
CNEP1R1-209ENST00000567712 CRCT1Q9UGL9 99 aa12.69□□□□□ -0.38
CNEP1R1-209ENST00000567712 ATP6V1G1O75348 118 aa12.68□□□□□ -0.38
CNEP1R1-209ENST00000567712 TRAV12-1A0A0B4J245 112 aa12.67□□□□□ -0.38
CNEP1R1-209ENST00000567712 APOC3P02656 99 aa12.67□□□□□ -0.38
CNEP1R1-209ENST00000567712 RPS29P62273 56 aaKnown RBP12.67□□□□□ -0.38
CNEP1R1-209ENST00000567712 XP32Q5T750 250 aa12.67□□□□□ -0.38
CNEP1R1-209ENST00000567712 KRTAP19-2Q3LHN2 52 aa12.66□□□□□ -0.38
CNEP1R1-209ENST00000567712 SSBP3-AS1Q7Z2R9 100 aa12.66□□□□□ -0.38
CNEP1R1-209ENST00000567712 IFI27L1Q96BM0 104 aa12.65□□□□□ -0.38
CNEP1R1-209ENST00000567712 NDUFA12Q9UI09 145 aa12.64□□□□□ -0.39
CNEP1R1-209ENST00000567712 SLC25A20O43772 301 aa12.62□□□□□ -0.39
CNEP1R1-209ENST00000567712 TSPEAR-AS2P59090 65 aa12.62□□□□□ -0.39
CNEP1R1-209ENST00000567712 HERV-K104P63124 156 aa12.62□□□□□ -0.39
CNEP1R1-209ENST00000567712 FAM19A2Q8N3H0 131 aa12.61□□□□□ -0.39
CNEP1R1-209ENST00000567712 SNAPINO95295 136 aa12.6□□□□□ -0.39
CNEP1R1-209ENST00000567712 SVBPQ8N300 66 aa12.6□□□□□ -0.39
CNEP1R1-209ENST00000567712 LOC107984156A0A0G2JMH3 177 aa12.59□□□□□ -0.39
CNEP1R1-209ENST00000567712 DDTP30046 118 aa12.59□□□□□ -0.39
CNEP1R1-209ENST00000567712 Q6ZRX8 168 aa12.59□□□□□ -0.39
CNEP1R1-209ENST00000567712 ARL17AQ8IVW1 177 aa12.59□□□□□ -0.39
CNEP1R1-209ENST00000567712 MYMXA0A1B0GTQ4 84 aa12.57□□□□□ -0.4
CNEP1R1-209ENST00000567712 MT1HP80294 61 aa12.55□□□□□ -0.4
CNEP1R1-209ENST00000567712 CHCHD1Q96BP2 118 aaKnown RBP12.55□□□□□ -0.4
CNEP1R1-209ENST00000567712 TRBV10-2A0A0K0K1G8 114 aa12.54□□□□□ -0.4
CNEP1R1-209ENST00000567712 LINC00587B1AMM8 73 aa12.54□□□□□ -0.4
CNEP1R1-209ENST00000567712 LINC00310P59036 64 aa12.54□□□□□ -0.4
CNEP1R1-209ENST00000567712 MAP1LC3CQ9BXW4 147 aa12.54□□□□□ -0.4
CNEP1R1-209ENST00000567712 C9orf153Q5TBE3 101 aa12.53□□□□□ -0.4
CNEP1R1-209ENST00000567712 ST20-AS1Q8NBB2 130 aa12.53□□□□□ -0.4
CNEP1R1-209ENST00000567712 IGLV6-57P01721 117 aa12.52□□□□□ -0.41
CNEP1R1-209ENST00000567712 S100A12P80511 92 aa12.52□□□□□ -0.41
CNEP1R1-209ENST00000567712 H0Y8G0 127 aa12.51□□□□□ -0.41
CNEP1R1-209ENST00000567712 EIF4EBP3O60516 100 aaPredicted RBP12.51□□□□□ -0.41
CNEP1R1-209ENST00000567712 LEPROTO15243 131 aa12.5□□□□□ -0.41
CNEP1R1-209ENST00000567712 SPANXB1Q9NS25 103 aaPredicted RBP12.5□□□□□ -0.41
CNEP1R1-209ENST00000567712 NDUFA5Q16718 116 aa12.49□□□□□ -0.41
CNEP1R1-209ENST00000567712 PCOTHQ58A44 107 aa12.49□□□□□ -0.41
CNEP1R1-209ENST00000567712 SOSTDC1Q6X4U4 206 aa12.48□□□□□ -0.41
CNEP1R1-209ENST00000567712 TRAV23DV6A0A075B6W5 121 aa12.46□□□□□ -0.41
CNEP1R1-209ENST00000567712 S100A7L2Q5SY68 101 aa12.46□□□□□ -0.41
CNEP1R1-209ENST00000567712 J3QQQ9 107 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms