RNA–Protein interactions for RNA: ENST00000567234.1

LINC00543-201, long intergenic non-protein coding RNA 543, humanhuman

BASIC

Gene LINC00543, Length 1,845 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00543-201ENST00000567234 FAM19A5Q7Z5A7 132 aaPredicted RBP15.87■□□□□ 0.13
LINC00543-201ENST00000567234 Q8IZM0 81 aa15.86■□□□□ 0.13
LINC00543-201ENST00000567234 S100A7L2Q5SY68 101 aa15.85■□□□□ 0.13
LINC00543-201ENST00000567234 CHCHD10Q8WYQ3 142 aaPredicted RBP15.85■□□□□ 0.13
LINC00543-201ENST00000567234 IBA57-AS1B1ANH7 110 aa15.84■□□□□ 0.13
LINC00543-201ENST00000567234 ATP5EP2Q5VTU8 51 aa15.84■□□□□ 0.13
LINC00543-201ENST00000567234 Q8N3U1 123 aa15.84■□□□□ 0.13
LINC00543-201ENST00000567234 C11orf45Q8TAV5 145 aa15.84■□□□□ 0.13
LINC00543-201ENST00000567234 PRR34Q9NV39 138 aa15.84■□□□□ 0.13
LINC00543-201ENST00000567234 KLK5Q9Y337 293 aaPredicted RBP15.84■□□□□ 0.13
LINC00543-201ENST00000567234 A0A0U1RRA0 63 aa15.83■□□□□ 0.12
LINC00543-201ENST00000567234 NDUFC2-KCTD14E9PQ53 114 aa15.83■□□□□ 0.12
LINC00543-201ENST00000567234 C6orf226Q5I0X4 101 aa15.83■□□□□ 0.12
LINC00543-201ENST00000567234 FAM218AQ96MZ4 157 aa15.83■□□□□ 0.12
LINC00543-201ENST00000567234 TENM3Q9P273 2699 aa15.81■□□□□ 0.12
LINC00543-201ENST00000567234 TM2D3Q9BRN9 247 aa15.81■□□□□ 0.12
LINC00543-201ENST00000567234 MRAPQ8TCY5 172 aa15.8■□□□□ 0.12
LINC00543-201ENST00000567234 UPK3BQ9BT76 320 aa15.8■□□□□ 0.12
LINC00543-201ENST00000567234 DEFB131BA0A096LNP1 70 aa15.79■□□□□ 0.12
LINC00543-201ENST00000567234 NANOS2P60321 138 aaKnown RBP15.79■□□□□ 0.12
LINC00543-201ENST00000567234 LOC107984640A0A0U1RRK4 108 aa15.78■□□□□ 0.12
LINC00543-201ENST00000567234 MIR7-3HGQ8N6C7 128 aa15.78■□□□□ 0.12
LINC00543-201ENST00000567234 IGLV10-54A0A075B6I4 117 aa15.77■□□□□ 0.11
LINC00543-201ENST00000567234 hADV29S1A0JD25 119 aa15.77■□□□□ 0.11
LINC00543-201ENST00000567234 LINC00158P58513 81 aa15.77■□□□□ 0.11
LINC00543-201ENST00000567234 DPH3Q96FX2 82 aa15.77■□□□□ 0.11
LINC00543-201ENST00000567234 KLK12Q9UKR0 248 aa15.77■□□□□ 0.11
LINC00543-201ENST00000567234 KIAA0087Q14695 138 aa15.75■□□□□ 0.11
LINC00543-201ENST00000567234 BCE1O60756 84 aa15.75■□□□□ 0.11
LINC00543-201ENST00000567234 ENHOQ6UWT2 76 aa15.74■□□□□ 0.11
LINC00543-201ENST00000567234 NDUFC2O95298 119 aa15.73■□□□□ 0.11
LINC00543-201ENST00000567234 SND1-IT1Q9HBX3 110 aa15.73■□□□□ 0.11
LINC00543-201ENST00000567234 TRBV10-3A0A0K0K1G6 114 aa15.73■□□□□ 0.11
LINC00543-201ENST00000567234 USP17L23D6RBM5 183 aa15.72■□□□□ 0.11
LINC00543-201ENST00000567234 ESRGQ1W209 222 aa15.71■□□□□ 0.11
LINC00543-201ENST00000567234 WFDC10BQ8IUB3 73 aa15.71■□□□□ 0.11
LINC00543-201ENST00000567234 LINC00337Q8N6G1 96 aa15.71■□□□□ 0.11
LINC00543-201ENST00000567234 TRAV10A0A0B4J240 114 aa15.71■□□□□ 0.1
LINC00543-201ENST00000567234 Q9HAA7 133 aa15.71■□□□□ 0.1
LINC00543-201ENST00000567234 IGKV2-28A0A075B6P5 120 aa15.7■□□□□ 0.1
LINC00543-201ENST00000567234 JMJD7-PLA2G4BH0Y9G9 81 aa15.7■□□□□ 0.1
LINC00543-201ENST00000567234 IGKV2D-28P01615 120 aa15.7■□□□□ 0.1
LINC00543-201ENST00000567234 COX17Q14061 63 aa15.7■□□□□ 0.1
LINC00543-201ENST00000567234 SMIM11BQ8TCY0 68 aa15.7■□□□□ 0.1
LINC00543-201ENST00000567234 PFN2P35080 140 aa15.69■□□□□ 0.1
LINC00543-201ENST00000567234 LINC00167Q96N53 147 aa15.69■□□□□ 0.1
LINC00543-201ENST00000567234 LINC00846Q9NV44 126 aa15.69■□□□□ 0.1
LINC00543-201ENST00000567234 CCKP06307 115 aa15.68■□□□□ 0.1
LINC00543-201ENST00000567234 CCL18P55774 89 aa15.68■□□□□ 0.1
LINC00543-201ENST00000567234 C14orf132Q9NPU4 83 aa15.67■□□□□ 0.1
LINC00543-201ENST00000567234 ORMDL1Q9P0S3 153 aa15.66■□□□□ 0.1
LINC00543-201ENST00000567234 HUWE1Q7Z6Z7 4374 aaKnown RBP15.66■□□□□ 0.1
LINC00543-201ENST00000567234 A0A087WYN8 130 aa15.66■□□□□ 0.1
LINC00543-201ENST00000567234 LINC01556Q5JQF7 62 aa15.65■□□□□ 0.1
LINC00543-201ENST00000567234 MUC7Q8TAX7 377 aa15.64■□□□□ 0.09
LINC00543-201ENST00000567234 MEGF8Q7Z7M0 2845 aa15.63■□□□□ 0.09
LINC00543-201ENST00000567234 SPAG11BQ08648 103 aa15.63■□□□□ 0.09
LINC00543-201ENST00000567234 IGKV3D-7A0A0C4DH55 119 aa15.61■□□□□ 0.09
LINC00543-201ENST00000567234 COL7A1Q02388 2944 aa15.61■□□□□ 0.09
LINC00543-201ENST00000567234 DNAH9Q9NYC9 4486 aa15.6■□□□□ 0.09
LINC00543-201ENST00000567234 LECT2O14960 151 aa15.59■□□□□ 0.09
LINC00543-201ENST00000567234 KRTAP26-1Q6PEX3 210 aa15.59■□□□□ 0.09
LINC00543-201ENST00000567234 B9D2Q9BPU9 175 aa15.58■□□□□ 0.08
LINC00543-201ENST00000567234 DNAH10OSP0CZ25 163 aa15.57■□□□□ 0.08
LINC00543-201ENST00000567234 PRKDCP78527 4128 aaKnown RBP15.57■□□□□ 0.08
LINC00543-201ENST00000567234 GVQW2A0A096LPI5 108 aaPredicted RBP15.57■□□□□ 0.08
LINC00543-201ENST00000567234 TMEM256-PLSCR3K7ERE1 68 aa15.57■□□□□ 0.08
LINC00543-201ENST00000567234 CYSTM1Q9H1C7 97 aa15.56■□□□□ 0.08
LINC00543-201ENST00000567234 UNQ6190/PRO20217Q6UXQ8 127 aa15.54■□□□□ 0.08
LINC00543-201ENST00000567234 C9orf129Q5T035 196 aaKnown RBP15.54■□□□□ 0.08
LINC00543-201ENST00000567234 C6orf223Q8N319 242 aa15.54■□□□□ 0.08
LINC00543-201ENST00000567234 EPM2AB3EWF7 344 aa15.53■□□□□ 0.08
LINC00543-201ENST00000567234 C10orf25Q5T742 122 aa15.52■□□□□ 0.08
LINC00543-201ENST00000567234 C1orf43Q9BWL3 253 aa15.52■□□□□ 0.08
LINC00543-201ENST00000567234 NCR3O14931 201 aa15.52■□□□□ 0.07
LINC00543-201ENST00000567234 C9orf116Q5BN46 136 aaPredicted RBP15.52■□□□□ 0.07
LINC00543-201ENST00000567234 H3BQ85 93 aa15.51■□□□□ 0.07
LINC00543-201ENST00000567234 GHRHP01286 108 aa15.51■□□□□ 0.07
LINC00543-201ENST00000567234 A0A087WVE0 104 aa15.5■□□□□ 0.07
LINC00543-201ENST00000567234 UBL5Q9BZL1 73 aa15.5■□□□□ 0.07
LINC00543-201ENST00000567234 Q5XG85 94 aa15.5■□□□□ 0.07
LINC00543-201ENST00000567234 LINC00588Q9Y4M8 146 aa15.5■□□□□ 0.07
LINC00543-201ENST00000567234 STAB2Q8WWQ8 2551 aa15.49■□□□□ 0.07
LINC00543-201ENST00000567234 DSCR8Q96T75 97 aa15.49■□□□□ 0.07
LINC00543-201ENST00000567234 ZNF561-AS1K7EIQ3 104 aa15.48■□□□□ 0.07
LINC00543-201ENST00000567234 SERP1Q9Y6X1 66 aa15.47■□□□□ 0.07
LINC00543-201ENST00000567234 F8WDY8 70 aa15.47■□□□□ 0.07
LINC00543-201ENST00000567234 OXTP01178 125 aa15.46■□□□□ 0.07
LINC00543-201ENST00000567234 Q8N814 137 aa15.46■□□□□ 0.07
LINC00543-201ENST00000567234 TRAV7A0A075B6U4 112 aa15.45■□□□□ 0.06
LINC00543-201ENST00000567234 C6orf48Q9UBA6 75 aa15.45■□□□□ 0.06
LINC00543-201ENST00000567234 FAM236DA0A1B0GTK5 79 aa15.45■□□□□ 0.06
LINC00543-201ENST00000567234 FAM236CP0DP71 79 aa15.45■□□□□ 0.06
LINC00543-201ENST00000567234 C15orf56Q8N910 161 aa15.45■□□□□ 0.06
LINC00543-201ENST00000567234 IGKV2D-24A0A075B6R9 120 aa15.44■□□□□ 0.06
LINC00543-201ENST00000567234 PDE6GP18545 87 aa15.43■□□□□ 0.06
LINC00543-201ENST00000567234 CAMK2N2Q96S95 79 aa15.43■□□□□ 0.06
LINC00543-201ENST00000567234 LOC110117498A0A087WWA1 95 aa15.42■□□□□ 0.06
LINC00543-201ENST00000567234 HIGD2BQ4VC39 106 aa15.4■□□□□ 0.06
LINC00543-201ENST00000567234 KLKP1Q107X0 134 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms