RNA–Protein interactions for RNA: ENST00000567023.5

COMMD4-216, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 926 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-216ENST00000567023 RPL28P46779 137 aaKnown RBP8.47□□□□□ -1.05
COMMD4-216ENST00000567023 RPL37AP8A6NKH3 93 aa8.45□□□□□ -1.06
COMMD4-216ENST00000567023 FABP4P15090 132 aa8.45□□□□□ -1.06
COMMD4-216ENST00000567023 COA6Q5JTJ3 125 aaKnown RBP8.45□□□□□ -1.06
COMMD4-216ENST00000567023 SFTA2Q6UW10 78 aa8.45□□□□□ -1.06
COMMD4-216ENST00000567023 ZNF625Q96I27 306 aaPredicted RBP8.45□□□□□ -1.06
COMMD4-216ENST00000567023 ATP6V1G1O75348 118 aa8.44□□□□□ -1.06
COMMD4-216ENST00000567023 H0Y8G0 127 aa8.43□□□□□ -1.06
COMMD4-216ENST00000567023 PLNP26678 52 aa8.43□□□□□ -1.06
COMMD4-216ENST00000567023 KRTAP13-1Q8IUC0 172 aa8.43□□□□□ -1.06
COMMD4-216ENST00000567023 A0A087X002 238 aa8.42□□□□□ -1.06
COMMD4-216ENST00000567023 GAGE10A6NGK3 116 aa8.42□□□□□ -1.06
COMMD4-216ENST00000567023 COX17Q14061 63 aa8.42□□□□□ -1.06
COMMD4-216ENST00000567023 NKAPP1Q8N9T2 125 aa8.42□□□□□ -1.06
COMMD4-216ENST00000567023 MAP1LC3CQ9BXW4 147 aa8.42□□□□□ -1.06
COMMD4-216ENST00000567023 DPM2O94777 84 aa8.41□□□□□ -1.06
COMMD4-216ENST00000567023 ERG28Q9UKR5 140 aa8.41□□□□□ -1.06
COMMD4-216ENST00000567023 MUC2Q02817 5179 aa8.41□□□□□ -1.06
COMMD4-216ENST00000567023 CRYGAP11844 174 aa8.4□□□□□ -1.06
COMMD4-216ENST00000567023 PFN2P35080 140 aa8.4□□□□□ -1.06
COMMD4-216ENST00000567023 SYS1-DBNDD2H3BUS1 97 aa8.39□□□□□ -1.07
COMMD4-216ENST00000567023 VPREB1P12018 145 aa8.39□□□□□ -1.07
COMMD4-216ENST00000567023 PMCHL2Q9BQD1 86 aa8.39□□□□□ -1.07
COMMD4-216ENST00000567023 SND1-IT1Q9HBX3 110 aa8.39□□□□□ -1.07
COMMD4-216ENST00000567023 IGKCP01834 107 aa8.38□□□□□ -1.07
COMMD4-216ENST00000567023 UBE2AP49459 152 aa8.38□□□□□ -1.07
COMMD4-216ENST00000567023 PRR4Q16378 134 aa8.38□□□□□ -1.07
COMMD4-216ENST00000567023 TYMSOSQ8TAI1 123 aa8.38□□□□□ -1.07
COMMD4-216ENST00000567023 IGKV2-28A0A075B6P5 120 aa8.37□□□□□ -1.07
COMMD4-216ENST00000567023 IGKV2D-28P01615 120 aa8.37□□□□□ -1.07
COMMD4-216ENST00000567023 RPL24P83731 157 aaKnown RBP8.37□□□□□ -1.07
COMMD4-216ENST00000567023 LEPROTO15243 131 aa8.36□□□□□ -1.07
COMMD4-216ENST00000567023 TSPEAR-AS2P59090 65 aa8.36□□□□□ -1.07
COMMD4-216ENST00000567023 FAM229BQ4G0N7 80 aa8.36□□□□□ -1.07
COMMD4-216ENST00000567023 LINC01545Q5VT33 79 aa8.36□□□□□ -1.07
COMMD4-216ENST00000567023 NDUFA12Q9UI09 145 aa8.36□□□□□ -1.07
COMMD4-216ENST00000567023 TSPAN13O95857 204 aa8.35□□□□□ -1.07
COMMD4-216ENST00000567023 HERV-K104P63124 156 aa8.35□□□□□ -1.07
COMMD4-216ENST00000567023 KRTAP13-2Q52LG2 175 aa8.35□□□□□ -1.07
COMMD4-216ENST00000567023 PET117Q6UWS5 81 aa8.35□□□□□ -1.07
COMMD4-216ENST00000567023 PLEKHB2Q96CS7 222 aa8.35□□□□□ -1.07
COMMD4-216ENST00000567023 TMEM126AQ9H061 195 aa8.35□□□□□ -1.07
COMMD4-216ENST00000567023 ANAPC11Q9NYG5 84 aa8.35□□□□□ -1.07
COMMD4-216ENST00000567023 HERVK_113P61574 105 aa8.34□□□□□ -1.07
COMMD4-216ENST00000567023 Q8NDZ9 215 aa8.34□□□□□ -1.07
COMMD4-216ENST00000567023 MYMXA0A1B0GTQ4 84 aa8.33□□□□□ -1.08
COMMD4-216ENST00000567023 J3QQQ9 107 aa8.33□□□□□ -1.08
COMMD4-216ENST00000567023 M0R378 163 aa8.33□□□□□ -1.08
COMMD4-216ENST00000567023 C3orf79P0CE67 100 aa8.33□□□□□ -1.08
COMMD4-216ENST00000567023 LINC00587B1AMM8 73 aa8.32□□□□□ -1.08
COMMD4-216ENST00000567023 TMEM238C9JI98 176 aa8.32□□□□□ -1.08
COMMD4-216ENST00000567023 SMIM13P0DJ93 91 aa8.32□□□□□ -1.08
COMMD4-216ENST00000567023 NMUP48645 174 aa8.32□□□□□ -1.08
COMMD4-216ENST00000567023 LINC00158P58513 81 aa8.32□□□□□ -1.08
COMMD4-216ENST00000567023 FAM19A1Q7Z5A9 133 aa8.32□□□□□ -1.08
COMMD4-216ENST00000567023 E9PLD3 99 aa8.31□□□□□ -1.08
COMMD4-216ENST00000567023 CTAG1AP78358 180 aa8.31□□□□□ -1.08
COMMD4-216ENST00000567023 PRLHP81277 87 aa8.31□□□□□ -1.08
COMMD4-216ENST00000567023 A0A0U1RRA0 63 aa8.3□□□□□ -1.08
COMMD4-216ENST00000567023 MEIG1Q5JSS6 88 aa8.3□□□□□ -1.08
COMMD4-216ENST00000567023 LGALS3P17931 250 aaKnown RBP8.29□□□□□ -1.08
COMMD4-216ENST00000567023 KRTDAPP60985 99 aa8.29□□□□□ -1.08
COMMD4-216ENST00000567023 MIR7-3HGQ8N6C7 128 aa8.29□□□□□ -1.08
COMMD4-216ENST00000567023 IGKV2D-26A0A0A0MRZ7 120 aa8.28□□□□□ -1.08
COMMD4-216ENST00000567023 HIST3H2BBQ8N257 126 aa8.28□□□□□ -1.08
COMMD4-216ENST00000567023 LINC00304Q8N9R0 145 aa8.28□□□□□ -1.08
COMMD4-216ENST00000567023 LOC107984156A0A0G2JMH3 177 aa8.27□□□□□ -1.09
COMMD4-216ENST00000567023 ARL17AQ8IVW1 177 aa8.27□□□□□ -1.09
COMMD4-216ENST00000567023 HIST1H2BLQ99880 126 aa8.26□□□□□ -1.09
COMMD4-216ENST00000567023 A0A0J9YXY3 114 aa8.25□□□□□ -1.09
COMMD4-216ENST00000567023 C20orf202A1L168 122 aa8.25□□□□□ -1.09
COMMD4-216ENST00000567023 BOD1L2Q8IYS8 172 aa8.25□□□□□ -1.09
COMMD4-216ENST00000567023 SPRR1AP35321 89 aa8.23□□□□□ -1.09
COMMD4-216ENST00000567023 AKR1D1P51857 326 aa8.23□□□□□ -1.09
COMMD4-216ENST00000567023 DAND5Q8N907 189 aa8.23□□□□□ -1.09
COMMD4-216ENST00000567023 HIGD2AQ9BW72 106 aa8.23□□□□□ -1.09
COMMD4-216ENST00000567023 KCNQ1DNQ9H478 68 aa8.23□□□□□ -1.09
COMMD4-216ENST00000567023 PRYO14603 147 aa8.22□□□□□ -1.09
COMMD4-216ENST00000567023 S100A6P06703 90 aa8.22□□□□□ -1.09
COMMD4-216ENST00000567023 S100A2P29034 98 aa8.22□□□□□ -1.09
COMMD4-216ENST00000567023 LINC00337Q8N6G1 96 aa8.22□□□□□ -1.09
COMMD4-216ENST00000567023 SPRR4Q96PI1 79 aa8.22□□□□□ -1.09
COMMD4-216ENST00000567023 KRTAP4-16G5E9R7 235 aaPredicted RBP8.21□□□□□ -1.1
COMMD4-216ENST00000567023 ADAMTSL4-AS1Q5T5F5 129 aa8.21□□□□□ -1.1
COMMD4-216ENST00000567023 C3orf22Q8N5N4 141 aa8.21□□□□□ -1.1
COMMD4-216ENST00000567023 LITAFQ99732 161 aa8.21□□□□□ -1.1
COMMD4-216ENST00000567023 RETNLBQ9BQ08 111 aa8.21□□□□□ -1.1
COMMD4-216ENST00000567023 TIMM17BO60830 172 aa8.2□□□□□ -1.1
COMMD4-216ENST00000567023 TPRXLQ17RH7 258 aa8.2□□□□□ -1.1
COMMD4-216ENST00000567023 ANKRD39Q53RE8 183 aa8.2□□□□□ -1.1
COMMD4-216ENST00000567023 SPAG11AQ6PDA7 123 aa8.2□□□□□ -1.1
COMMD4-216ENST00000567023 ZNF815PA8K554 130 aa8.19□□□□□ -1.1
COMMD4-216ENST00000567023 SNRPEP62304 92 aaKnown RBP8.19□□□□□ -1.1
COMMD4-216ENST00000567023 SOSTDC1Q6X4U4 206 aa8.19□□□□□ -1.1
COMMD4-216ENST00000567023 ATOH7Q8N100 152 aa8.19□□□□□ -1.1
COMMD4-216ENST00000567023 TTTY13Q9BZ97 58 aa8.19□□□□□ -1.1
COMMD4-216ENST00000567023 ZNF706Q9Y5V0 76 aaPredicted RBP8.19□□□□□ -1.1
COMMD4-216ENST00000567023 TRBV10-2A0A0K0K1G8 114 aa8.18□□□□□ -1.1
COMMD4-216ENST00000567023 C5orf52A6NGY3 159 aa8.18□□□□□ -1.1
COMMD4-216ENST00000567023 NCR3O14931 201 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms