RNA–Protein interactions for RNA: ENST00000566843.1

COMMD4-215, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 2,284 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-215ENST00000566843 TRAV7A0A075B6U4 112 aa10.71□□□□□ -0.69
COMMD4-215ENST00000566843 EPM2AB3EWF7 344 aa10.71□□□□□ -0.69
COMMD4-215ENST00000566843 HIVEP2P31629 2446 aa10.71□□□□□ -0.7
COMMD4-215ENST00000566843 DEFB130BP0DP73 79 aa10.7□□□□□ -0.7
COMMD4-215ENST00000566843 DEFB130AP0DP74 79 aa10.7□□□□□ -0.7
COMMD4-215ENST00000566843 ESM1Q9NQ30 184 aa10.7□□□□□ -0.7
COMMD4-215ENST00000566843 LINC00482Q8N8I6 264 aa10.69□□□□□ -0.7
COMMD4-215ENST00000566843 FAM236DA0A1B0GTK5 79 aa10.69□□□□□ -0.7
COMMD4-215ENST00000566843 FAM236CP0DP71 79 aa10.69□□□□□ -0.7
COMMD4-215ENST00000566843 CHCHD10Q8WYQ3 142 aaPredicted RBP10.69□□□□□ -0.7
COMMD4-215ENST00000566843 RNASE1P07998 156 aaKnown RBP10.68□□□□□ -0.7
COMMD4-215ENST00000566843 C9orf116Q5BN46 136 aaPredicted RBP10.68□□□□□ -0.7
COMMD4-215ENST00000566843 MUC7Q8TAX7 377 aa10.68□□□□□ -0.7
COMMD4-215ENST00000566843 HIVEP1P15822 2718 aa10.68□□□□□ -0.7
COMMD4-215ENST00000566843 LINC01547P58512 204 aaPredicted RBP10.68□□□□□ -0.7
COMMD4-215ENST00000566843 PRO0255Q9UI72 69 aa10.68□□□□□ -0.7
COMMD4-215ENST00000566843 H7BZZ5 65 aa10.67□□□□□ -0.7
COMMD4-215ENST00000566843 LINC00269Q8N2A0 174 aa10.67□□□□□ -0.7
COMMD4-215ENST00000566843 CYSRT1A8MQ03 144 aa10.67□□□□□ -0.7
COMMD4-215ENST00000566843 INAFM1C9JVW0 142 aa10.67□□□□□ -0.7
COMMD4-215ENST00000566843 H3BQ85 93 aa10.67□□□□□ -0.7
COMMD4-215ENST00000566843 M0R2N4 97 aa10.67□□□□□ -0.7
COMMD4-215ENST00000566843 C9orf66Q5T8R8 295 aa10.67□□□□□ -0.7
COMMD4-215ENST00000566843 SETXQ7Z333 2677 aaKnown RBP10.66□□□□□ -0.7
COMMD4-215ENST00000566843 PDE6GP18545 87 aa10.66□□□□□ -0.7
COMMD4-215ENST00000566843 Q6ZVQ6 151 aa10.66□□□□□ -0.7
COMMD4-215ENST00000566843 IGLV6-57P01721 117 aa10.65□□□□□ -0.7
COMMD4-215ENST00000566843 KLKP1Q107X0 134 aa10.65□□□□□ -0.7
COMMD4-215ENST00000566843 LAMTOR3Q9UHA4 124 aa10.65□□□□□ -0.7
COMMD4-215ENST00000566843 SERP1Q9Y6X1 66 aa10.65□□□□□ -0.7
COMMD4-215ENST00000566843 CXCL6P80162 114 aa10.64□□□□□ -0.71
COMMD4-215ENST00000566843 REG3AQ06141 175 aa10.63□□□□□ -0.71
COMMD4-215ENST00000566843 C16orf95Q9H693 158 aa10.63□□□□□ -0.71
COMMD4-215ENST00000566843 NF1P21359 2839 aa10.63□□□□□ -0.71
COMMD4-215ENST00000566843 A0A096LPF7 62 aa10.63□□□□□ -0.71
COMMD4-215ENST00000566843 LINC01006Q8NI28 216 aa10.63□□□□□ -0.71
COMMD4-215ENST00000566843 TRAV10A0A0B4J240 114 aa10.62□□□□□ -0.71
COMMD4-215ENST00000566843 X6R8D5 127 aa10.62□□□□□ -0.71
COMMD4-215ENST00000566843 A0A0J9YWU9 116 aa10.61□□□□□ -0.71
COMMD4-215ENST00000566843 IGHV4-30-4P0DP06 118 aa10.61□□□□□ -0.71
COMMD4-215ENST00000566843 IGLV10-54A0A075B6I4 117 aa10.61□□□□□ -0.71
COMMD4-215ENST00000566843 HAMPP81172 84 aa10.61□□□□□ -0.71
COMMD4-215ENST00000566843 C10orf25Q5T742 122 aa10.61□□□□□ -0.71
COMMD4-215ENST00000566843 JMJD1CQ15652 2540 aa10.61□□□□□ -0.71
COMMD4-215ENST00000566843 ANGP03950 147 aaKnown RBP10.6□□□□□ -0.71
COMMD4-215ENST00000566843 UNQ6190/PRO20217Q6UXQ8 127 aa10.6□□□□□ -0.71
COMMD4-215ENST00000566843 Q6ZQY7 126 aa10.6□□□□□ -0.71
COMMD4-215ENST00000566843 FN1P02751 2386 aaKnown RBP10.6□□□□□ -0.71
COMMD4-215ENST00000566843 Q8N3U1 123 aa10.59□□□□□ -0.71
COMMD4-215ENST00000566843 C1orf43Q9BWL3 253 aa10.59□□□□□ -0.71
COMMD4-215ENST00000566843 F8P00451 2351 aa10.59□□□□□ -0.71
COMMD4-215ENST00000566843 SPATA3Q8NHX4 192 aa10.59□□□□□ -0.71
COMMD4-215ENST00000566843 SPAG11BQ08648 103 aa10.58□□□□□ -0.72
COMMD4-215ENST00000566843 NSD1Q96L73 2696 aaPredicted RBP10.58□□□□□ -0.72
COMMD4-215ENST00000566843 TRBV7-4A0A0J9YYF1 115 aa10.58□□□□□ -0.72
COMMD4-215ENST00000566843 LYRM9A8MSI8 78 aa10.56□□□□□ -0.72
COMMD4-215ENST00000566843 LINC00336Q6ZUF6 198 aa10.56□□□□□ -0.72
COMMD4-215ENST00000566843 GVQW2A0A096LPI5 108 aaPredicted RBP10.56□□□□□ -0.72
COMMD4-215ENST00000566843 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.56□□□□□ -0.72
COMMD4-215ENST00000566843 SEC61GP60059 68 aa10.55□□□□□ -0.72
COMMD4-215ENST00000566843 RMI2Q96E14 147 aa10.55□□□□□ -0.72
COMMD4-215ENST00000566843 SETD2Q9BYW2 2564 aaPredicted RBP10.55□□□□□ -0.72
COMMD4-215ENST00000566843 DIRC1Q969H9 104 aa10.54□□□□□ -0.72
COMMD4-215ENST00000566843 TRBV7-6A0A0J9YX20 115 aa10.54□□□□□ -0.72
COMMD4-215ENST00000566843 SNURFQ9Y675 71 aa10.54□□□□□ -0.72
COMMD4-215ENST00000566843 NDUFC1O43677 76 aa10.53□□□□□ -0.72
COMMD4-215ENST00000566843 F8WEM9 126 aa10.52□□□□□ -0.73
COMMD4-215ENST00000566843 COX7BP24311 80 aa10.51□□□□□ -0.73
COMMD4-215ENST00000566843 V9GYY9 64 aa10.51□□□□□ -0.73
COMMD4-215ENST00000566843 SMIM26A0A096LP01 95 aa10.5□□□□□ -0.73
COMMD4-215ENST00000566843 ELOF1P60002 83 aaKnown RBP10.5□□□□□ -0.73
COMMD4-215ENST00000566843 TM2D3Q9BRN9 247 aa10.5□□□□□ -0.73
COMMD4-215ENST00000566843 PRR34Q9NV39 138 aa10.5□□□□□ -0.73
COMMD4-215ENST00000566843 ZNF73O43830 326 aaPredicted RBP10.5□□□□□ -0.73
COMMD4-215ENST00000566843 C6orf48Q9UBA6 75 aa10.49□□□□□ -0.73
COMMD4-215ENST00000566843 PKIGQ9Y2B9 76 aa10.49□□□□□ -0.73
COMMD4-215ENST00000566843 ATP5EP56381 51 aaPredicted RBP10.49□□□□□ -0.73
COMMD4-215ENST00000566843 LELP1Q5T871 98 aa10.49□□□□□ -0.73
COMMD4-215ENST00000566843 ERC2-IT1O76042 136 aa10.48□□□□□ -0.73
COMMD4-215ENST00000566843 TEP1Q99973 2627 aaKnown RBP10.47□□□□□ -0.73
COMMD4-215ENST00000566843 SCXQ7RTU7 201 aa10.47□□□□□ -0.73
COMMD4-215ENST00000566843 NIPBLQ6KC79 2804 aaeCLIP10.47□□□□□ -0.73
COMMD4-215ENST00000566843 FP248Q71RG6 208 aaPredicted RBP10.47□□□□□ -0.73
COMMD4-215ENST00000566843 NREPQ16612 68 aa10.46□□□□□ -0.73
COMMD4-215ENST00000566843 MIFP14174 115 aa10.46□□□□□ -0.74
COMMD4-215ENST00000566843 DAD1P61803 113 aa10.45□□□□□ -0.74
COMMD4-215ENST00000566843 XAGE1AQ9HD64 81 aa10.45□□□□□ -0.74
COMMD4-215ENST00000566843 VPREB1P12018 145 aa10.44□□□□□ -0.74
COMMD4-215ENST00000566843 DEFB4AO15263 64 aa10.44□□□□□ -0.74
COMMD4-215ENST00000566843 KLK12Q9UKR0 248 aa10.44□□□□□ -0.74
COMMD4-215ENST00000566843 CELA1Q9UNI1 258 aa10.44□□□□□ -0.74
COMMD4-215ENST00000566843 BPY2O14599 106 aa10.43□□□□□ -0.74
COMMD4-215ENST00000566843 KRTAP10-3P60369 221 aa10.42□□□□□ -0.74
COMMD4-215ENST00000566843 TMEM254Q8TBM7 123 aa10.42□□□□□ -0.74
COMMD4-215ENST00000566843 LINC00528Q8N1L1 170 aa10.41□□□□□ -0.74
COMMD4-215ENST00000566843 M0R378 163 aa10.41□□□□□ -0.74
COMMD4-215ENST00000566843 IGKV4-1P06312 121 aa10.41□□□□□ -0.74
COMMD4-215ENST00000566843 DEFB135Q30KP9 77 aa10.41□□□□□ -0.74
COMMD4-215ENST00000566843 C1orf195Q5TG92 126 aa10.41□□□□□ -0.74
COMMD4-215ENST00000566843 MAST4O15021 2626 aa10.4□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms