RNA–Protein interactions for RNA: ENST00000566756.5

CMTM3-213, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-213ENST00000566756 SLPIP03973 132 aa11.37□□□□□ -0.59
CMTM3-213ENST00000566756 S100A7L2Q5SY68 101 aa11.37□□□□□ -0.59
CMTM3-213ENST00000566756 PRR34Q9NV39 138 aa11.37□□□□□ -0.59
CMTM3-213ENST00000566756 LINC00846Q9NV44 126 aa11.37□□□□□ -0.59
CMTM3-213ENST00000566756 UQCRQO14949 82 aa11.37□□□□□ -0.59
CMTM3-213ENST00000566756 IGLV10-54A0A075B6I4 117 aa11.36□□□□□ -0.59
CMTM3-213ENST00000566756 C3orf22Q8N5N4 141 aa11.36□□□□□ -0.59
CMTM3-213ENST00000566756 H3BQ85 93 aa11.36□□□□□ -0.59
CMTM3-213ENST00000566756 DEFB4AO15263 64 aa11.36□□□□□ -0.59
CMTM3-213ENST00000566756 PRR3P79522 188 aaKnown RBP11.36□□□□□ -0.59
CMTM3-213ENST00000566756 GVQW2A0A096LPI5 108 aaPredicted RBP11.35□□□□□ -0.59
CMTM3-213ENST00000566756 ATOX1O00244 68 aa11.35□□□□□ -0.59
CMTM3-213ENST00000566756 CELA1Q9UNI1 258 aa11.35□□□□□ -0.59
CMTM3-213ENST00000566756 SPAG11BQ08648 103 aa11.34□□□□□ -0.59
CMTM3-213ENST00000566756 Q8N3U1 123 aa11.34□□□□□ -0.59
CMTM3-213ENST00000566756 DNAH3Q8TD57 4116 aa11.34□□□□□ -0.59
CMTM3-213ENST00000566756 LINC00526Q96FQ7 95 aa11.34□□□□□ -0.59
CMTM3-213ENST00000566756 C9orf116Q5BN46 136 aaPredicted RBP11.33□□□□□ -0.6
CMTM3-213ENST00000566756 ANK2Q01484 3957 aa11.33□□□□□ -0.6
CMTM3-213ENST00000566756 C6orf99Q4VX62 202 aa11.32□□□□□ -0.6
CMTM3-213ENST00000566756 LINC00575Q6W349 94 aa11.32□□□□□ -0.6
CMTM3-213ENST00000566756 ATP5EP2Q5VTU8 51 aa11.32□□□□□ -0.6
CMTM3-213ENST00000566756 COX7CP15954 63 aa11.31□□□□□ -0.6
CMTM3-213ENST00000566756 IGLV6-57P01721 117 aa11.3□□□□□ -0.6
CMTM3-213ENST00000566756 RPL18AQ02543 176 aaKnown RBP11.3□□□□□ -0.6
CMTM3-213ENST00000566756 UNQ6190/PRO20217Q6UXQ8 127 aa11.3□□□□□ -0.6
CMTM3-213ENST00000566756 Q8NDZ9 215 aa11.3□□□□□ -0.6
CMTM3-213ENST00000566756 C10orf25Q5T742 122 aa11.29□□□□□ -0.6
CMTM3-213ENST00000566756 KPRPQ5T749 579 aaPredicted RBP11.29□□□□□ -0.6
CMTM3-213ENST00000566756 C9orf153Q5TBE3 101 aa11.29□□□□□ -0.6
CMTM3-213ENST00000566756 MDFIQ99750 246 aa11.29□□□□□ -0.6
CMTM3-213ENST00000566756 H3BNG1 76 aa11.28□□□□□ -0.6
CMTM3-213ENST00000566756 GHRHP01286 108 aa11.28□□□□□ -0.6
CMTM3-213ENST00000566756 ENHOQ6UWT2 76 aa11.28□□□□□ -0.6
CMTM3-213ENST00000566756 C2orf48Q96LS8 159 aa11.28□□□□□ -0.6
CMTM3-213ENST00000566756 hADV29S1A0JD25 119 aa11.27□□□□□ -0.61
CMTM3-213ENST00000566756 LYPD5Q6UWN5 251 aa11.27□□□□□ -0.61
CMTM3-213ENST00000566756 C6orf223Q8N319 242 aa11.27□□□□□ -0.61
CMTM3-213ENST00000566756 RETNQ9HD89 108 aa11.27□□□□□ -0.61
CMTM3-213ENST00000566756 KLK12Q9UKR0 248 aa11.27□□□□□ -0.61
CMTM3-213ENST00000566756 NOTCH1P46531 2555 aa11.27□□□□□ -0.61
CMTM3-213ENST00000566756 IGKV3D-7A0A0C4DH55 119 aa11.27□□□□□ -0.61
CMTM3-213ENST00000566756 ZNF561-AS1K7EIQ3 104 aa11.26□□□□□ -0.61
CMTM3-213ENST00000566756 CRYGAP11844 174 aa11.26□□□□□ -0.61
CMTM3-213ENST00000566756 HTN3P15516 51 aa11.26□□□□□ -0.61
CMTM3-213ENST00000566756 LOC110117498A0A087WWA1 95 aa11.25□□□□□ -0.61
CMTM3-213ENST00000566756 TRBV10-3A0A0K0K1G6 114 aa11.25□□□□□ -0.61
CMTM3-213ENST00000566756 NBEAL1Q6ZS30 2694 aa11.24□□□□□ -0.61
CMTM3-213ENST00000566756 K7EIL1 84 aa11.23□□□□□ -0.61
CMTM3-213ENST00000566756 PDE6GP18545 87 aa11.23□□□□□ -0.61
CMTM3-213ENST00000566756 SVIPQ8NHG7 77 aa11.23□□□□□ -0.61
CMTM3-213ENST00000566756 RBM3P98179 157 aaKnown RBP11.22□□□□□ -0.61
CMTM3-213ENST00000566756 C6orf48Q9UBA6 75 aa11.22□□□□□ -0.61
CMTM3-213ENST00000566756 TRBV7-6A0A0J9YX20 115 aa11.21□□□□□ -0.62
CMTM3-213ENST00000566756 Q6ZQT0 140 aa11.21□□□□□ -0.62
CMTM3-213ENST00000566756 SERP2Q8N6R1 65 aa11.21□□□□□ -0.62
CMTM3-213ENST00000566756 TM2D3Q9BRN9 247 aa11.21□□□□□ -0.62
CMTM3-213ENST00000566756 UBL5Q9BZL1 73 aa11.21□□□□□ -0.62
CMTM3-213ENST00000566756 MGAM2Q2M2H8 2515 aa11.2□□□□□ -0.62
CMTM3-213ENST00000566756 USP17L23D6RBM5 183 aa11.19□□□□□ -0.62
CMTM3-213ENST00000566756 F8WDY8 70 aa11.19□□□□□ -0.62
CMTM3-213ENST00000566756 DIRC1Q969H9 104 aa11.19□□□□□ -0.62
CMTM3-213ENST00000566756 TRAV23DV6A0A075B6W5 121 aa11.19□□□□□ -0.62
CMTM3-213ENST00000566756 PRB2P02812 416 aaPredicted RBP11.19□□□□□ -0.62
CMTM3-213ENST00000566756 SMIM20Q8N5G0 67 aa11.17□□□□□ -0.62
CMTM3-213ENST00000566756 A0A087WVE0 104 aa11.17□□□□□ -0.62
CMTM3-213ENST00000566756 KRTAP26-1Q6PEX3 210 aa11.17□□□□□ -0.62
CMTM3-213ENST00000566756 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.17□□□□□ -0.62
CMTM3-213ENST00000566756 TENM3Q9P273 2699 aa11.17□□□□□ -0.62
CMTM3-213ENST00000566756 LAMTOR3Q9UHA4 124 aa11.16□□□□□ -0.62
CMTM3-213ENST00000566756 Q6ZTC4 211 aa11.16□□□□□ -0.62
CMTM3-213ENST00000566756 Q6ZQY7 126 aa11.15□□□□□ -0.62
CMTM3-213ENST00000566756 C11orf45Q8TAV5 145 aa11.15□□□□□ -0.62
CMTM3-213ENST00000566756 DSCR8Q96T75 97 aa11.15□□□□□ -0.62
CMTM3-213ENST00000566756 ZNF73O43830 326 aaPredicted RBP11.14□□□□□ -0.63
CMTM3-213ENST00000566756 ELOF1P60002 83 aaKnown RBP11.14□□□□□ -0.63
CMTM3-213ENST00000566756 CAMK2N2Q96S95 79 aa11.14□□□□□ -0.63
CMTM3-213ENST00000566756 VPREB1P12018 145 aa11.14□□□□□ -0.63
CMTM3-213ENST00000566756 COX7BP24311 80 aa11.14□□□□□ -0.63
CMTM3-213ENST00000566756 BCE1O60756 84 aa11.13□□□□□ -0.63
CMTM3-213ENST00000566756 WFDC10BQ8IUB3 73 aa11.13□□□□□ -0.63
CMTM3-213ENST00000566756 UPK3BQ9BT76 320 aa11.13□□□□□ -0.63
CMTM3-213ENST00000566756 M0R378 163 aa11.12□□□□□ -0.63
CMTM3-213ENST00000566756 XAGE1AQ9HD64 81 aa11.12□□□□□ -0.63
CMTM3-213ENST00000566756 NDUFC2-KCTD14E9PQ53 114 aa11.1□□□□□ -0.63
CMTM3-213ENST00000566756 DEFB131BA0A096LNP1 70 aa11.1□□□□□ -0.63
CMTM3-213ENST00000566756 MRAPQ8TCY5 172 aa11.1□□□□□ -0.63
CMTM3-213ENST00000566756 C15orf56Q8N910 161 aa11.09□□□□□ -0.63
CMTM3-213ENST00000566756 TRBV7-4A0A0J9YYF1 115 aa11.08□□□□□ -0.64
CMTM3-213ENST00000566756 TMEM258P61165 79 aa11.08□□□□□ -0.64
CMTM3-213ENST00000566756 HIGD2BQ4VC39 106 aa11.08□□□□□ -0.64
CMTM3-213ENST00000566756 Q6ZRU5 148 aa11.08□□□□□ -0.64
CMTM3-213ENST00000566756 CXCL6P80162 114 aa11.07□□□□□ -0.64
CMTM3-213ENST00000566756 LINC01556Q5JQF7 62 aa11.07□□□□□ -0.64
CMTM3-213ENST00000566756 FAM19A1Q7Z5A9 133 aa11.07□□□□□ -0.64
CMTM3-213ENST00000566756 C1orf43Q9BWL3 253 aa11.07□□□□□ -0.64
CMTM3-213ENST00000566756 RPS28P62857 69 aaKnown RBP11.07□□□□□ -0.64
CMTM3-213ENST00000566756 Q6ZVQ6 151 aa11.06□□□□□ -0.64
CMTM3-213ENST00000566756 TRAV10A0A0B4J240 114 aa11.05□□□□□ -0.64
CMTM3-213ENST00000566756 LINC01547P58512 204 aaPredicted RBP11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 130.6 ms