RNA–Protein interactions for RNA: ENST00000566550.1

HERPUD1-211, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 511 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-211ENST00000566550 CR1P17927 2039 aa1.57□□□□□ -2.16
HERPUD1-211ENST00000566550 INTS1Q8N201 2190 aaKnown RBP1.57□□□□□ -2.16
HERPUD1-211ENST00000566550 TEX49A0A1B0GTD5 131 aa1.56□□□□□ -2.16
HERPUD1-211ENST00000566550 hADV29S1A0JD25 119 aa1.56□□□□□ -2.16
HERPUD1-211ENST00000566550 MRPS14O60783 128 aaKnown RBP1.56□□□□□ -2.16
HERPUD1-211ENST00000566550 CCL8P80075 99 aa1.56□□□□□ -2.16
HERPUD1-211ENST00000566550 KRTAP13-4Q3LI77 160 aa1.56□□□□□ -2.16
HERPUD1-211ENST00000566550 GDF5OSQ5U4N7 250 aa1.56□□□□□ -2.16
HERPUD1-211ENST00000566550 NDUFA11Q86Y39 141 aa1.56□□□□□ -2.16
HERPUD1-211ENST00000566550 ZGRF1Q86YA3 2104 aa1.56□□□□□ -2.16
HERPUD1-211ENST00000566550 C20orf197Q8N268 126 aa1.56□□□□□ -2.16
HERPUD1-211ENST00000566550 C9orf62Q8N4C0 152 aa1.56□□□□□ -2.16
HERPUD1-211ENST00000566550 TNRC6BQ9UPQ9 1833 aaKnown RBP1.56□□□□□ -2.16
HERPUD1-211ENST00000566550 PI4KAP42356 2102 aa1.55□□□□□ -2.16
HERPUD1-211ENST00000566550 TACC2O95359 2948 aa1.55□□□□□ -2.16
HERPUD1-211ENST00000566550 LAMA4Q16363 1823 aa1.55□□□□□ -2.16
HERPUD1-211ENST00000566550 PDCD11Q14690 1871 aaKnown RBP1.55□□□□□ -2.16
HERPUD1-211ENST00000566550 H3BQ15 152 aa1.55□□□□□ -2.16
HERPUD1-211ENST00000566550 M0R2N4 97 aa1.55□□□□□ -2.16
HERPUD1-211ENST00000566550 HCRTO43612 131 aa1.55□□□□□ -2.16
HERPUD1-211ENST00000566550 SIX6O95475 246 aa1.55□□□□□ -2.16
HERPUD1-211ENST00000566550 OBSCN-AS1Q96MR7 158 aa1.55□□□□□ -2.16
HERPUD1-211ENST00000566550 MED9Q9NWA0 146 aa1.55□□□□□ -2.16
HERPUD1-211ENST00000566550 SCP2D1Q9UJQ7 156 aa1.55□□□□□ -2.16
HERPUD1-211ENST00000566550 Q9Y3F1 56 aa1.55□□□□□ -2.16
HERPUD1-211ENST00000566550 EXPH5Q8NEV8 1989 aa1.55□□□□□ -2.16
HERPUD1-211ENST00000566550 PKDREJQ9NTG1 2253 aa1.54□□□□□ -2.16
HERPUD1-211ENST00000566550 A0A0D9SFI3 127 aa1.54□□□□□ -2.16
HERPUD1-211ENST00000566550 IGKV2-29A2NJV5 120 aaPredicted RBP1.54□□□□□ -2.16
HERPUD1-211ENST00000566550 CRYM-AS1A6NIL9 109 aa1.54□□□□□ -2.16
HERPUD1-211ENST00000566550 FAUP35544 74 aaKnown RBP1.54□□□□□ -2.16
HERPUD1-211ENST00000566550 UBE2D1P51668 147 aa1.54□□□□□ -2.16
HERPUD1-211ENST00000566550 KRTDAPP60985 99 aa1.54□□□□□ -2.16
HERPUD1-211ENST00000566550 SEC11AP67812 179 aa1.54□□□□□ -2.16
HERPUD1-211ENST00000566550 SSBP1Q04837 148 aaKnown RBP1.54□□□□□ -2.16
HERPUD1-211ENST00000566550 ZNF818PQ6ZRF7 136 aa1.54□□□□□ -2.16
HERPUD1-211ENST00000566550 FAM213BQ8TBF2 198 aa1.54□□□□□ -2.16
HERPUD1-211ENST00000566550 SMR3AQ99954 134 aa1.54□□□□□ -2.16
HERPUD1-211ENST00000566550 CYP4F30PQ9H0H9 118 aa1.54□□□□□ -2.16
HERPUD1-211ENST00000566550 MANBALQ9NQG1 85 aa1.54□□□□□ -2.16
HERPUD1-211ENST00000566550 KNTC1P50748 2209 aa1.54□□□□□ -2.16
HERPUD1-211ENST00000566550 LOC110117498A0A087WWA1 95 aa1.53□□□□□ -2.16
HERPUD1-211ENST00000566550 IGKV3D-7A0A0C4DH55 119 aa1.53□□□□□ -2.16
HERPUD1-211ENST00000566550 IGKV3OR2-268A0A0C4DH90 116 aa1.53□□□□□ -2.16
HERPUD1-211ENST00000566550 NAP1L6A6NFF2 107 aa1.53□□□□□ -2.16
HERPUD1-211ENST00000566550 FXYD1O00168 92 aa1.53□□□□□ -2.16
HERPUD1-211ENST00000566550 ABCA4P78363 2273 aa1.53□□□□□ -2.16
HERPUD1-211ENST00000566550 SFTA2Q6UW10 78 aa1.53□□□□□ -2.16
HERPUD1-211ENST00000566550 Q86TA4 180 aa1.53□□□□□ -2.16
HERPUD1-211ENST00000566550 DLG5Q8TDM6 1919 aa1.53□□□□□ -2.16
HERPUD1-211ENST00000566550 AMELYQ99218 206 aa1.53□□□□□ -2.16
HERPUD1-211ENST00000566550 CNTRLQ7Z7A1 2325 aa1.52□□□□□ -2.17
HERPUD1-211ENST00000566550 MYH8P13535 1937 aa1.52□□□□□ -2.17
HERPUD1-211ENST00000566550 TRRAPQ9Y4A5 3859 aa1.52□□□□□ -2.17
HERPUD1-211ENST00000566550 PIN1P1O15428 100 aa1.52□□□□□ -2.17
HERPUD1-211ENST00000566550 IGLC1P0CG04 106 aa1.52□□□□□ -2.17
HERPUD1-211ENST00000566550 KRTAP12-1P59990 96 aa1.52□□□□□ -2.17
HERPUD1-211ENST00000566550 FXYD3Q14802 87 aa1.52□□□□□ -2.17
HERPUD1-211ENST00000566550 ZNF563Q8TA94 476 aa1.52□□□□□ -2.17
HERPUD1-211ENST00000566550 LINC00208Q96KT6 92 aa1.52□□□□□ -2.17
HERPUD1-211ENST00000566550 LCE3DQ9BYE3 92 aa1.52□□□□□ -2.17
HERPUD1-211ENST00000566550 NPVFQ9HCQ7 196 aa1.52□□□□□ -2.17
HERPUD1-211ENST00000566550 FAIMQ9NVQ4 179 aa1.52□□□□□ -2.17
HERPUD1-211ENST00000566550 TRBV7-3A0A075B6L6 115 aa1.51□□□□□ -2.17
HERPUD1-211ENST00000566550 A0A1W2PPM0 123 aa1.51□□□□□ -2.17
HERPUD1-211ENST00000566550 CHKB-CPT1BH3BT56 60 aa1.51□□□□□ -2.17
HERPUD1-211ENST00000566550 ZNF56Q15929 161 aa1.51□□□□□ -2.17
HERPUD1-211ENST00000566550 XAF1Q6GPH4 301 aa1.51□□□□□ -2.17
HERPUD1-211ENST00000566550 COX7B2Q8TF08 81 aa1.51□□□□□ -2.17
HERPUD1-211ENST00000566550 F5P12259 2224 aa1.5□□□□□ -2.17
HERPUD1-211ENST00000566550 TRBV7-1A0A0A6YYK4 115 aa1.5□□□□□ -2.17
HERPUD1-211ENST00000566550 NBDYA0A0U1RRE5 68 aa1.5□□□□□ -2.17
HERPUD1-211ENST00000566550 PPP1R17O96001 155 aa1.5□□□□□ -2.17
HERPUD1-211ENST00000566550 Q0VG73 95 aa1.5□□□□□ -2.17
HERPUD1-211ENST00000566550 PCOTHQ58A44 107 aa1.5□□□□□ -2.17
HERPUD1-211ENST00000566550 FAM74A4Q5TZK3 123 aa1.5□□□□□ -2.17
HERPUD1-211ENST00000566550 UNQ6190/PRO20217Q6UXQ8 127 aa1.5□□□□□ -2.17
HERPUD1-211ENST00000566550 C5orf56Q8N8D9 126 aa1.5□□□□□ -2.17
HERPUD1-211ENST00000566550 BET1LQ9NYM9 111 aa1.5□□□□□ -2.17
HERPUD1-211ENST00000566550 SACSQ9NZJ4 4579 aa1.5□□□□□ -2.17
HERPUD1-211ENST00000566550 DNAH1Q9P2D7 4330 aa1.49□□□□□ -2.17
HERPUD1-211ENST00000566550 DYNC2H1Q8NCM8 4307 aaKnown RBP1.49□□□□□ -2.17
HERPUD1-211ENST00000566550 COL7A1Q02388 2944 aa1.49□□□□□ -2.17
HERPUD1-211ENST00000566550 IGKV2-40A0A087WW87 121 aaPredicted RBP1.49□□□□□ -2.17
HERPUD1-211ENST00000566550 ATOX1O00244 68 aa1.49□□□□□ -2.17
HERPUD1-211ENST00000566550 IGKV2D-40P01614 121 aaPredicted RBP1.49□□□□□ -2.17
HERPUD1-211ENST00000566550 APOC3P02656 99 aa1.49□□□□□ -2.17
HERPUD1-211ENST00000566550 CCL3L1P16619 93 aa1.49□□□□□ -2.17
HERPUD1-211ENST00000566550 EDDM3BP56851 147 aa1.49□□□□□ -2.17
HERPUD1-211ENST00000566550 ELOF1P60002 83 aaKnown RBP1.49□□□□□ -2.17
HERPUD1-211ENST00000566550 SPAG11BQ08648 103 aa1.49□□□□□ -2.17
HERPUD1-211ENST00000566550 PYY3Q5JQD4 70 aa1.49□□□□□ -2.17
HERPUD1-211ENST00000566550 SPAG11AQ6PDA7 123 aa1.49□□□□□ -2.17
HERPUD1-211ENST00000566550 PPP1R1CQ8WVI7 109 aa1.49□□□□□ -2.17
HERPUD1-211ENST00000566550 MGST2Q99735 147 aa1.49□□□□□ -2.17
HERPUD1-211ENST00000566550 V9GYV3 84 aa1.49□□□□□ -2.17
HERPUD1-211ENST00000566550 SPTBP11277 2137 aa1.49□□□□□ -2.17
HERPUD1-211ENST00000566550 FAT4Q6V0I7 4981 aa1.49□□□□□ -2.17
HERPUD1-211ENST00000566550 PLIN4Q96Q06 1357 aa1.48□□□□□ -2.17
HERPUD1-211ENST00000566550 LCE6AA0A183 80 aa1.48□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 142.8 ms