RNA–Protein interactions for RNA: ENST00000566339.5

SPSB3-208, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB3, Length 1,784 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-208ENST00000566339 PDE6GP18545 87 aa14.78□□□□□ -0.04
SPSB3-208ENST00000566339 ZNF561-AS1K7EIQ3 104 aa14.77□□□□□ -0.05
SPSB3-208ENST00000566339 HILS1P60008 231 aa14.76□□□□□ -0.05
SPSB3-208ENST00000566339 REG3AQ06141 175 aa14.75□□□□□ -0.05
SPSB3-208ENST00000566339 LINC00269Q8N2A0 174 aa14.75□□□□□ -0.05
SPSB3-208ENST00000566339 C6orf223Q8N319 242 aa14.75□□□□□ -0.05
SPSB3-208ENST00000566339 A0A087WVE0 104 aa14.75□□□□□ -0.05
SPSB3-208ENST00000566339 A0A0J9YWU9 116 aa14.75□□□□□ -0.05
SPSB3-208ENST00000566339 IGHV4-30-4P0DP06 118 aa14.75□□□□□ -0.05
SPSB3-208ENST00000566339 GHRHP01286 108 aa14.74□□□□□ -0.05
SPSB3-208ENST00000566339 C6orf99Q4VX62 202 aa14.74□□□□□ -0.05
SPSB3-208ENST00000566339 STAB1Q9NY15 2570 aa14.74□□□□□ -0.05
SPSB3-208ENST00000566339 RBM3P98179 157 aaKnown RBP14.73□□□□□ -0.05
SPSB3-208ENST00000566339 GVQW2A0A096LPI5 108 aaPredicted RBP14.72□□□□□ -0.05
SPSB3-208ENST00000566339 Q6ZQT0 140 aa14.72□□□□□ -0.05
SPSB3-208ENST00000566339 CLPSL2Q6UWE3 100 aa14.71□□□□□ -0.05
SPSB3-208ENST00000566339 NOTCH3Q9UM47 2321 aa14.7□□□□□ -0.06
SPSB3-208ENST00000566339 IGLV6-57P01721 117 aa14.7□□□□□ -0.06
SPSB3-208ENST00000566339 ANGP03950 147 aaKnown RBP14.7□□□□□ -0.06
SPSB3-208ENST00000566339 PRR3P79522 188 aaKnown RBP14.7□□□□□ -0.06
SPSB3-208ENST00000566339 LINC00482Q8N8I6 264 aa14.7□□□□□ -0.06
SPSB3-208ENST00000566339 C9orf66Q5T8R8 295 aa14.69□□□□□ -0.06
SPSB3-208ENST00000566339 DPH3Q96FX2 82 aa14.69□□□□□ -0.06
SPSB3-208ENST00000566339 KRTAP24-1Q3LI83 254 aa14.68□□□□□ -0.06
SPSB3-208ENST00000566339 SPAG11BQ08648 103 aa14.67□□□□□ -0.06
SPSB3-208ENST00000566339 LELP1Q5T871 98 aa14.66□□□□□ -0.06
SPSB3-208ENST00000566339 FAM19A5Q7Z5A7 132 aaPredicted RBP14.65□□□□□ -0.06
SPSB3-208ENST00000566339 SPATA3Q8NHX4 192 aa14.65□□□□□ -0.06
SPSB3-208ENST00000566339 TRBV7-6A0A0J9YX20 115 aa14.65□□□□□ -0.06
SPSB3-208ENST00000566339 LOC107984640A0A0U1RRK4 108 aa14.65□□□□□ -0.06
SPSB3-208ENST00000566339 ENHOQ6UWT2 76 aa14.65□□□□□ -0.06
SPSB3-208ENST00000566339 APOC4P55056 127 aa14.64□□□□□ -0.07
SPSB3-208ENST00000566339 CYSTM1Q9H1C7 97 aa14.64□□□□□ -0.07
SPSB3-208ENST00000566339 PRR34Q9NV39 138 aa14.64□□□□□ -0.07
SPSB3-208ENST00000566339 ANK2Q01484 3957 aa14.63□□□□□ -0.07
SPSB3-208ENST00000566339 KRTAP10-3P60369 221 aa14.62□□□□□ -0.07
SPSB3-208ENST00000566339 DAD1P61803 113 aa14.62□□□□□ -0.07
SPSB3-208ENST00000566339 CXCL6P80162 114 aa14.62□□□□□ -0.07
SPSB3-208ENST00000566339 DSCR8Q96T75 97 aa14.62□□□□□ -0.07
SPSB3-208ENST00000566339 A0A096LPF7 62 aa14.62□□□□□ -0.07
SPSB3-208ENST00000566339 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP14.62□□□□□ -0.07
SPSB3-208ENST00000566339 Q8NDZ9 215 aa14.62□□□□□ -0.07
SPSB3-208ENST00000566339 TRAV7A0A075B6U4 112 aa14.61□□□□□ -0.07
SPSB3-208ENST00000566339 C5orf47Q569G3 176 aa14.61□□□□□ -0.07
SPSB3-208ENST00000566339 C9orf116Q5BN46 136 aaPredicted RBP14.61□□□□□ -0.07
SPSB3-208ENST00000566339 LAMTOR3Q9UHA4 124 aa14.61□□□□□ -0.07
SPSB3-208ENST00000566339 MIFP14174 115 aa14.6□□□□□ -0.07
SPSB3-208ENST00000566339 FAM19A1Q7Z5A9 133 aa14.6□□□□□ -0.07
SPSB3-208ENST00000566339 IGLV10-54A0A075B6I4 117 aa14.6□□□□□ -0.07
SPSB3-208ENST00000566339 UNQ6190/PRO20217Q6UXQ8 127 aa14.59□□□□□ -0.07
SPSB3-208ENST00000566339 TRAV23DV6A0A075B6W5 121 aa14.58□□□□□ -0.08
SPSB3-208ENST00000566339 DIRC1Q969H9 104 aa14.58□□□□□ -0.08
SPSB3-208ENST00000566339 TENM1Q9UKZ4 2725 aa14.57□□□□□ -0.08
SPSB3-208ENST00000566339 LINC01547P58512 204 aaPredicted RBP14.56□□□□□ -0.08
SPSB3-208ENST00000566339 C10orf25Q5T742 122 aa14.56□□□□□ -0.08
SPSB3-208ENST00000566339 Q6ZVQ6 151 aa14.55□□□□□ -0.08
SPSB3-208ENST00000566339 SPART-AS1P0CW21 52 aa14.54□□□□□ -0.08
SPSB3-208ENST00000566339 Q6ZQY7 126 aa14.54□□□□□ -0.08
SPSB3-208ENST00000566339 TRBV7-4A0A0J9YYF1 115 aa14.52□□□□□ -0.08
SPSB3-208ENST00000566339 COX7BP24311 80 aa14.52□□□□□ -0.09
SPSB3-208ENST00000566339 Q8NAQ8 132 aa14.52□□□□□ -0.09
SPSB3-208ENST00000566339 WFDC9Q8NEX5 89 aa14.52□□□□□ -0.09
SPSB3-208ENST00000566339 ELOF1P60002 83 aaKnown RBP14.5□□□□□ -0.09
SPSB3-208ENST00000566339 KLKP1Q107X0 134 aa14.5□□□□□ -0.09
SPSB3-208ENST00000566339 DEFB135Q30KP9 77 aa14.5□□□□□ -0.09
SPSB3-208ENST00000566339 Q8N3U1 123 aa14.5□□□□□ -0.09
SPSB3-208ENST00000566339 ZNF73O43830 326 aaPredicted RBP14.49□□□□□ -0.09
SPSB3-208ENST00000566339 F8WDY8 70 aa14.48□□□□□ -0.09
SPSB3-208ENST00000566339 C6orf48Q9UBA6 75 aa14.48□□□□□ -0.09
SPSB3-208ENST00000566339 FBN3Q75N90 2809 aa14.48□□□□□ -0.09
SPSB3-208ENST00000566339 FAM236DA0A1B0GTK5 79 aa14.47□□□□□ -0.09
SPSB3-208ENST00000566339 FAM236CP0DP71 79 aa14.47□□□□□ -0.09
SPSB3-208ENST00000566339 C20orf197Q8N268 126 aa14.47□□□□□ -0.09
SPSB3-208ENST00000566339 KLK12Q9UKR0 248 aa14.47□□□□□ -0.09
SPSB3-208ENST00000566339 HAMPP81172 84 aa14.46□□□□□ -0.09
SPSB3-208ENST00000566339 EPM2AB3EWF7 344 aa14.45□□□□□ -0.1
SPSB3-208ENST00000566339 EGFEM1PQ0D2K5 195 aa14.45□□□□□ -0.1
SPSB3-208ENST00000566339 H3BNG1 76 aa14.45□□□□□ -0.1
SPSB3-208ENST00000566339 M0R378 163 aa14.45□□□□□ -0.1
SPSB3-208ENST00000566339 NDUFC1O43677 76 aa14.45□□□□□ -0.1
SPSB3-208ENST00000566339 CELA1Q9UNI1 258 aa14.44□□□□□ -0.1
SPSB3-208ENST00000566339 SERP1Q9Y6X1 66 aa14.43□□□□□ -0.1
SPSB3-208ENST00000566339 VPREB1P12018 145 aa14.42□□□□□ -0.1
SPSB3-208ENST00000566339 M0R2N4 97 aa14.42□□□□□ -0.1
SPSB3-208ENST00000566339 H7BZZ5 65 aa14.41□□□□□ -0.1
SPSB3-208ENST00000566339 WIPF1O43516 503 aa14.41□□□□□ -0.1
SPSB3-208ENST00000566339 OXTP01178 125 aa14.41□□□□□ -0.1
SPSB3-208ENST00000566339 TRRAPQ9Y4A5 3859 aa14.4□□□□□ -0.1
SPSB3-208ENST00000566339 DEFB4AO15263 64 aa14.4□□□□□ -0.1
SPSB3-208ENST00000566339 NBEAL1Q6ZS30 2694 aa14.4□□□□□ -0.1
SPSB3-208ENST00000566339 ERC2-IT1O76042 136 aa14.39□□□□□ -0.11
SPSB3-208ENST00000566339 ATP5EP56381 51 aaPredicted RBP14.39□□□□□ -0.11
SPSB3-208ENST00000566339 LINC00528Q8N1L1 170 aa14.37□□□□□ -0.11
SPSB3-208ENST00000566339 CAMK2N2Q96S95 79 aa14.37□□□□□ -0.11
SPSB3-208ENST00000566339 Q5XG85 94 aa14.35□□□□□ -0.11
SPSB3-208ENST00000566339 XAGE1AQ9HD64 81 aa14.35□□□□□ -0.11
SPSB3-208ENST00000566339 TRAV10A0A0B4J240 114 aa14.34□□□□□ -0.11
SPSB3-208ENST00000566339 A0A1B0GW54 56 aa14.34□□□□□ -0.11
SPSB3-208ENST00000566339 KRTAP26-1Q6PEX3 210 aa14.34□□□□□ -0.11
SPSB3-208ENST00000566339 HTN3P15516 51 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms