RNA–Protein interactions for RNA: ENST00000566009.5

SMPD3-206, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 4

Gene SMPD3, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-206ENST00000566009 LINC00310P59036 64 aa4.59□□□□□ -1.67
SMPD3-206ENST00000566009 COA6Q5JTJ3 125 aaKnown RBP4.59□□□□□ -1.67
SMPD3-206ENST00000566009 ATP5L2Q7Z4Y8 100 aa4.59□□□□□ -1.67
SMPD3-206ENST00000566009 LINC00469Q8N7U9 141 aa4.59□□□□□ -1.67
SMPD3-206ENST00000566009 TRAV13-1A0A0B4J241 112 aa4.58□□□□□ -1.68
SMPD3-206ENST00000566009 TRBV30A0A0K0K1B3 111 aa4.58□□□□□ -1.68
SMPD3-206ENST00000566009 GAGE10A6NGK3 116 aa4.58□□□□□ -1.68
SMPD3-206ENST00000566009 PRSS47A8MTI9 375 aa4.58□□□□□ -1.68
SMPD3-206ENST00000566009 NPYP01303 97 aa4.58□□□□□ -1.68
SMPD3-206ENST00000566009 S100A6P06703 90 aa4.58□□□□□ -1.68
SMPD3-206ENST00000566009 RPL37P61927 97 aaKnown RBP4.58□□□□□ -1.68
SMPD3-206ENST00000566009 ORMDL3Q8N138 153 aa4.58□□□□□ -1.68
SMPD3-206ENST00000566009 PRELID3AQ96N28 172 aa4.58□□□□□ -1.68
SMPD3-206ENST00000566009 C12orf57Q99622 126 aa4.58□□□□□ -1.68
SMPD3-206ENST00000566009 XAGE1AQ9HD64 81 aa4.58□□□□□ -1.68
SMPD3-206ENST00000566009 TRAV9-1A0A075B6T8 112 aa4.57□□□□□ -1.68
SMPD3-206ENST00000566009 RPL39P62891 51 aaKnown RBP4.57□□□□□ -1.68
SMPD3-206ENST00000566009 PDZD11Q5EBL8 140 aa4.57□□□□□ -1.68
SMPD3-206ENST00000566009 RNASE13Q5GAN3 156 aaKnown RBP4.57□□□□□ -1.68
SMPD3-206ENST00000566009 SMIM2Q9BVW6 85 aa4.57□□□□□ -1.68
SMPD3-206ENST00000566009 LOC389332A0A1B0GUA5 103 aa4.56□□□□□ -1.68
SMPD3-206ENST00000566009 MRPS36P82909 103 aaKnown RBP4.56□□□□□ -1.68
SMPD3-206ENST00000566009 PYY3Q5JQD4 70 aa4.56□□□□□ -1.68
SMPD3-206ENST00000566009 SPRR4Q96PI1 79 aa4.56□□□□□ -1.68
SMPD3-206ENST00000566009 HIST1H2BLQ99880 126 aa4.56□□□□□ -1.68
SMPD3-206ENST00000566009 SPANXA1Q9NS26 97 aa4.56□□□□□ -1.68
SMPD3-206ENST00000566009 LAMTOR2Q9Y2Q5 125 aa4.56□□□□□ -1.68
SMPD3-206ENST00000566009 TRAPPC1Q9Y5R8 145 aa4.56□□□□□ -1.68
SMPD3-206ENST00000566009 C20orf202A1L168 122 aa4.55□□□□□ -1.68
SMPD3-206ENST00000566009 IGLV6-57P01721 117 aa4.55□□□□□ -1.68
SMPD3-206ENST00000566009 SMIM6P0DI80 62 aa4.55□□□□□ -1.68
SMPD3-206ENST00000566009 KIAA0087Q14695 138 aa4.55□□□□□ -1.68
SMPD3-206ENST00000566009 C2orf82Q6UX34 121 aa4.55□□□□□ -1.68
SMPD3-206ENST00000566009 FAM104AQ969W3 186 aa4.55□□□□□ -1.68
SMPD3-206ENST00000566009 MRPL18Q9H0U6 180 aaKnown RBP4.55□□□□□ -1.68
SMPD3-206ENST00000566009 MAP1LC3AQ9H492 121 aa4.55□□□□□ -1.68
SMPD3-206ENST00000566009 PYGO1Q9Y3Y4 419 aa4.55□□□□□ -1.68
SMPD3-206ENST00000566009 FABP4P15090 132 aa4.54□□□□□ -1.68
SMPD3-206ENST00000566009 IFI27P40305 119 aaPredicted RBP4.54□□□□□ -1.68
SMPD3-206ENST00000566009 KIAA1644Q3SXP7 199 aa4.54□□□□□ -1.68
SMPD3-206ENST00000566009 Q6ZUT4 128 aa4.54□□□□□ -1.68
SMPD3-206ENST00000566009 FAM19A1Q7Z5A9 133 aa4.54□□□□□ -1.68
SMPD3-206ENST00000566009 Q8N8P6 123 aa4.54□□□□□ -1.68
SMPD3-206ENST00000566009 GNB1LQ9BYB4 327 aa4.54□□□□□ -1.68
SMPD3-206ENST00000566009 IGHV3OR16-9A0A0B4J2B5 98 aa4.53□□□□□ -1.68
SMPD3-206ENST00000566009 PCP4L1A6NKN8 68 aa4.53□□□□□ -1.68
SMPD3-206ENST00000566009 K7EMI3 77 aa4.53□□□□□ -1.68
SMPD3-206ENST00000566009 G0S2P27469 103 aa4.53□□□□□ -1.68
SMPD3-206ENST00000566009 SPRR2EP22531 72 aa4.52□□□□□ -1.69
SMPD3-206ENST00000566009 SPRR2BP35325 72 aa4.52□□□□□ -1.69
SMPD3-206ENST00000566009 SPRR2AP35326 72 aa4.52□□□□□ -1.69
SMPD3-206ENST00000566009 ORMDL2Q53FV1 153 aa4.52□□□□□ -1.69
SMPD3-206ENST00000566009 TMEM141Q96I45 108 aa4.52□□□□□ -1.69
SMPD3-206ENST00000566009 VCX2Q9H322 139 aa4.52□□□□□ -1.69
SMPD3-206ENST00000566009 NXT2Q9NPJ8 142 aaKnown RBP4.52□□□□□ -1.69
SMPD3-206ENST00000566009 CYSLTR1Q9Y271 337 aa4.52□□□□□ -1.69
SMPD3-206ENST00000566009 IGLV4-3A0A075B6K6 122 aa4.51□□□□□ -1.69
SMPD3-206ENST00000566009 LINC00587B1AMM8 73 aa4.51□□□□□ -1.69
SMPD3-206ENST00000566009 SERF1AO75920 110 aa4.51□□□□□ -1.69
SMPD3-206ENST00000566009 S100A2P29034 98 aa4.51□□□□□ -1.69
SMPD3-206ENST00000566009 JOSD1Q15040 202 aaPredicted RBP4.51□□□□□ -1.69
SMPD3-206ENST00000566009 C2orf66Q6UXQ4 117 aa4.51□□□□□ -1.69
SMPD3-206ENST00000566009 URB1-AS1Q96HZ7 61 aa4.51□□□□□ -1.69
SMPD3-206ENST00000566009 IGKV2-28A0A075B6P5 120 aa4.5□□□□□ -1.69
SMPD3-206ENST00000566009 IGIPA6NJ69 53 aa4.5□□□□□ -1.69
SMPD3-206ENST00000566009 IGKV2D-28P01615 120 aa4.5□□□□□ -1.69
SMPD3-206ENST00000566009 NPSP0C0P6 89 aa4.5□□□□□ -1.69
SMPD3-206ENST00000566009 COX19Q49B96 90 aa4.5□□□□□ -1.69
SMPD3-206ENST00000566009 Q6ZN92 141 aa4.5□□□□□ -1.69
SMPD3-206ENST00000566009 TEX43Q6ZNM6 134 aa4.5□□□□□ -1.69
SMPD3-206ENST00000566009 AMELXQ99217 191 aa4.5□□□□□ -1.69
SMPD3-206ENST00000566009 C2orf88Q9BSF0 95 aa4.5□□□□□ -1.69
SMPD3-206ENST00000566009 ALKBH7Q9BT30 221 aaPredicted RBP4.5□□□□□ -1.69
SMPD3-206ENST00000566009 HIGD2AQ9BW72 106 aa4.5□□□□□ -1.69
SMPD3-206ENST00000566009 PAPPA-AS1Q5QFB9 102 aa4.49□□□□□ -1.69
SMPD3-206ENST00000566009 ZC2HC1BQ5TFG8 222 aa4.49□□□□□ -1.69
SMPD3-206ENST00000566009 SSBP3-AS1Q7Z2R9 100 aa4.49□□□□□ -1.69
SMPD3-206ENST00000566009 LINC01561Q8N1V8 128 aa4.49□□□□□ -1.69
SMPD3-206ENST00000566009 C18orf32Q8TCD1 76 aa4.49□□□□□ -1.69
SMPD3-206ENST00000566009 GEMIN7Q9H840 131 aaKnown RBP4.49□□□□□ -1.69
SMPD3-206ENST00000566009 SEC11AP67812 179 aa4.48□□□□□ -1.69
SMPD3-206ENST00000566009 MOBPQ13875 183 aa4.48□□□□□ -1.69
SMPD3-206ENST00000566009 ERASQ7Z444 233 aa4.48□□□□□ -1.69
SMPD3-206ENST00000566009 FAM19A3Q7Z5A8 133 aa4.48□□□□□ -1.69
SMPD3-206ENST00000566009 TOMM6Q96B49 74 aa4.48□□□□□ -1.69
SMPD3-206ENST00000566009 ZNF706Q9Y5V0 76 aaPredicted RBP4.48□□□□□ -1.69
SMPD3-206ENST00000566009 LINC01549A6NIU2 74 aa4.47□□□□□ -1.69
SMPD3-206ENST00000566009 TMEM238C9JI98 176 aa4.47□□□□□ -1.69
SMPD3-206ENST00000566009 S100A12P80511 92 aa4.47□□□□□ -1.69
SMPD3-206ENST00000566009 C6orf226Q5I0X4 101 aa4.47□□□□□ -1.69
SMPD3-206ENST00000566009 BAGE3Q86Y29 109 aa4.47□□□□□ -1.69
SMPD3-206ENST00000566009 C20orf166-AS1Q96NR2 134 aa4.47□□□□□ -1.69
SMPD3-206ENST00000566009 SCGB3A1Q96QR1 104 aa4.47□□□□□ -1.69
SMPD3-206ENST00000566009 TMEM126AQ9H061 195 aa4.47□□□□□ -1.69
SMPD3-206ENST00000566009 LINC01546A6NGU7 62 aa4.46□□□□□ -1.7
SMPD3-206ENST00000566009 A6NN06 94 aa4.46□□□□□ -1.7
SMPD3-206ENST00000566009 PRSS2P07478 247 aa4.46□□□□□ -1.7
SMPD3-206ENST00000566009 HERVK_113P63121 156 aa4.46□□□□□ -1.7
SMPD3-206ENST00000566009 TIMM17AQ99595 171 aa4.46□□□□□ -1.7
SMPD3-206ENST00000566009 PRO1933Q9H354 126 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 122.1 ms