RNA–Protein interactions for RNA: ENST00000565684.5

KIFC3-223, Transcript of kinesin family member C3, human

TSL 5

Gene KIFC3, Length 623 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KIFC3-223	ENST00000565684	RPL24	P83731	157 aa	Known RBP	13.37	□□□□□ -0.27
KIFC3-223	ENST00000565684	TMEM238	C9JI98	176 aa		13.36	□□□□□ -0.27
KIFC3-223	ENST00000565684	TMEM126A	Q9H061	195 aa		13.36	□□□□□ -0.27
KIFC3-223	ENST00000565684	SLC7A5P1	Q8MH63	180 aa		13.35	□□□□□ -0.27
KIFC3-223	ENST00000565684	ANAPC11	Q9NYG5	84 aa		13.35	□□□□□ -0.27
KIFC3-223	ENST00000565684		M0R378	163 aa		13.34	□□□□□ -0.27
KIFC3-223	ENST00000565684	LINC00158	P58513	81 aa		13.34	□□□□□ -0.27
KIFC3-223	ENST00000565684	PRLH	P81277	87 aa		13.34	□□□□□ -0.27
KIFC3-223	ENST00000565684		A0A0U1RRA0	63 aa		13.33	□□□□□ -0.28
KIFC3-223	ENST00000565684	SERF1A	O75920	110 aa		13.33	□□□□□ -0.28
KIFC3-223	ENST00000565684	CRYGA	P11844	174 aa		13.32	□□□□□ -0.28
KIFC3-223	ENST00000565684	KRTAP13-2	Q52LG2	175 aa		13.32	□□□□□ -0.28
KIFC3-223	ENST00000565684		H0Y8G0	127 aa		13.3	□□□□□ -0.28
KIFC3-223	ENST00000565684	SMIM13	P0DJ93	91 aa		13.3	□□□□□ -0.28
KIFC3-223	ENST00000565684	FAM19A1	Q7Z5A9	133 aa		13.3	□□□□□ -0.28
KIFC3-223	ENST00000565684	TYMSOS	Q8TAI1	123 aa		13.29	□□□□□ -0.28
KIFC3-223	ENST00000565684	LEPROTL1	O95214	131 aa		13.28	□□□□□ -0.28
KIFC3-223	ENST00000565684	COLCA2	A8K830	154 aa		13.27	□□□□□ -0.29
KIFC3-223	ENST00000565684	TSPEAR-AS2	P59090	65 aa		13.27	□□□□□ -0.29
KIFC3-223	ENST00000565684	FAM229B	Q4G0N7	80 aa		13.27	□□□□□ -0.29
KIFC3-223	ENST00000565684	TSPAN13	O95857	204 aa		13.26	□□□□□ -0.29
KIFC3-223	ENST00000565684	HERV-K104	P63124	156 aa		13.26	□□□□□ -0.29
KIFC3-223	ENST00000565684	MEIG1	Q5JSS6	88 aa		13.26	□□□□□ -0.29
KIFC3-223	ENST00000565684	MIR7-3HG	Q8N6C7	128 aa		13.26	□□□□□ -0.29
KIFC3-223	ENST00000565684	PRR4	Q16378	134 aa		13.25	□□□□□ -0.29
KIFC3-223	ENST00000565684	NDUFA12	Q9UI09	145 aa		13.25	□□□□□ -0.29
KIFC3-223	ENST00000565684	BOD1L2	Q8IYS8	172 aa		13.23	□□□□□ -0.29
KIFC3-223	ENST00000565684	PLEKHB2	Q96CS7	222 aa		13.22	□□□□□ -0.29
KIFC3-223	ENST00000565684	MYMX	A0A1B0GTQ4	84 aa		13.21	□□□□□ -0.29
KIFC3-223	ENST00000565684	NCR3	O14931	201 aa		13.21	□□□□□ -0.29
KIFC3-223	ENST00000565684	FABP4	P15090	132 aa		13.21	□□□□□ -0.29
KIFC3-223	ENST00000565684	PLN	P26678	52 aa		13.21	□□□□□ -0.29
KIFC3-223	ENST00000565684	PMCHL2	Q9BQD1	86 aa		13.21	□□□□□ -0.29
KIFC3-223	ENST00000565684	LEPROT	O15243	131 aa		13.2	□□□□□ -0.3
KIFC3-223	ENST00000565684	ATP6V1G1	O75348	118 aa		13.2	□□□□□ -0.3
KIFC3-223	ENST00000565684	HSPB8	Q9UJY1	196 aa		13.2	□□□□□ -0.3
KIFC3-223	ENST00000565684	LINC00587	B1AMM8	73 aa		13.18	□□□□□ -0.3
KIFC3-223	ENST00000565684	DPM2	O94777	84 aa		13.18	□□□□□ -0.3
KIFC3-223	ENST00000565684	HIGD2A	Q9BW72	106 aa		13.18	□□□□□ -0.3
KIFC3-223	ENST00000565684	PRY	O14603	147 aa		13.17	□□□□□ -0.3
KIFC3-223	ENST00000565684	SPRR1A	P35321	89 aa		13.17	□□□□□ -0.3
KIFC3-223	ENST00000565684	IGKV2D-26	A0A0A0MRZ7	120 aa		13.16	□□□□□ -0.3
KIFC3-223	ENST00000565684		J3QQQ9	107 aa		13.16	□□□□□ -0.3
KIFC3-223	ENST00000565684	DAND5	Q8N907	189 aa		13.16	□□□□□ -0.3
KIFC3-223	ENST00000565684	KRTAP4-16	G5E9R7	235 aa	Predicted RBP	13.15	□□□□□ -0.3
KIFC3-223	ENST00000565684	IGKC	P01834	107 aa		13.15	□□□□□ -0.3
KIFC3-223	ENST00000565684	LINC00304	Q8N9R0	145 aa		13.15	□□□□□ -0.3
KIFC3-223	ENST00000565684	MAP1LC3C	Q9BXW4	147 aa		13.15	□□□□□ -0.3
KIFC3-223	ENST00000565684	KCNQ1DN	Q9H478	68 aa		13.15	□□□□□ -0.3
KIFC3-223	ENST00000565684	LOC107984156	A0A0G2JMH3	177 aa		13.14	□□□□□ -0.31
KIFC3-223	ENST00000565684	ARL17A	Q8IVW1	177 aa		13.14	□□□□□ -0.31
KIFC3-223	ENST00000565684	C3orf22	Q8N5N4	141 aa		13.14	□□□□□ -0.31
KIFC3-223	ENST00000565684	MUC2	Q02817	5179 aa		13.13	□□□□□ -0.31
KIFC3-223	ENST00000565684	TRBV10-3	A0A0K0K1G6	114 aa		13.13	□□□□□ -0.31
KIFC3-223	ENST00000565684	LINC00337	Q8N6G1	96 aa		13.13	□□□□□ -0.31
KIFC3-223	ENST00000565684	SPRR4	Q96PI1	79 aa		13.13	□□□□□ -0.31
KIFC3-223	ENST00000565684	HERVK_113	P61574	105 aa		13.12	□□□□□ -0.31
KIFC3-223	ENST00000565684	NMU	P48645	174 aa		13.1	□□□□□ -0.31
KIFC3-223	ENST00000565684	HIST1H2BK	O60814	126 aa		13.09	□□□□□ -0.31
KIFC3-223	ENST00000565684	HIST1H2BJ	P06899	126 aa		13.09	□□□□□ -0.31
KIFC3-223	ENST00000565684	HIST1H2BO	P23527	126 aa		13.09	□□□□□ -0.31
KIFC3-223	ENST00000565684	HIST1H2BB	P33778	126 aa		13.09	□□□□□ -0.31
KIFC3-223	ENST00000565684	HIST1H2BD	P58876	126 aa		13.09	□□□□□ -0.31
KIFC3-223	ENST00000565684	HIST1H2BC	P62807	126 aa		13.09	□□□□□ -0.31
KIFC3-223	ENST00000565684	HIST2H2BE	Q16778	126 aa		13.09	□□□□□ -0.31
KIFC3-223	ENST00000565684	HIST2H2BF	Q5QNW6	126 aa	Predicted RBP	13.09	□□□□□ -0.31
KIFC3-223	ENST00000565684	HIST1H2BH	Q93079	126 aa		13.09	□□□□□ -0.31
KIFC3-223	ENST00000565684	HIST1H2BN	Q99877	126 aa		13.09	□□□□□ -0.31
KIFC3-223	ENST00000565684	HIST1H2BM	Q99879	126 aa		13.09	□□□□□ -0.31
KIFC3-223	ENST00000565684	RETNLB	Q9BQ08	111 aa		13.09	□□□□□ -0.31
KIFC3-223	ENST00000565684	LGALS3	P17931	250 aa	Known RBP	13.08	□□□□□ -0.32
KIFC3-223	ENST00000565684	SMCR5	Q8TEV8	140 aa		13.07	□□□□□ -0.32
KIFC3-223	ENST00000565684	TRBV10-2	A0A0K0K1G8	114 aa		13.06	□□□□□ -0.32
KIFC3-223	ENST00000565684	ETDC	A0A1B0GVM5	59 aa		13.06	□□□□□ -0.32
KIFC3-223	ENST00000565684		E9PLD3	99 aa		13.05	□□□□□ -0.32
KIFC3-223	ENST00000565684	ZNF706	Q9Y5V0	76 aa	Predicted RBP	13.05	□□□□□ -0.32
KIFC3-223	ENST00000565684	SYS1-DBNDD2	H3BUS1	97 aa		13.04	□□□□□ -0.32
KIFC3-223	ENST00000565684	EIF4EBP3	O60516	100 aa	Predicted RBP	13.04	□□□□□ -0.32
KIFC3-223	ENST00000565684	DDT	P30046	118 aa		13.04	□□□□□ -0.32
KIFC3-223	ENST00000565684	SOSTDC1	Q6X4U4	206 aa		13.04	□□□□□ -0.32
KIFC3-223	ENST00000565684		A0A0J9YXY3	114 aa		13.03	□□□□□ -0.32
KIFC3-223	ENST00000565684		B5MCH6	92 aa		13.03	□□□□□ -0.32
KIFC3-223	ENST00000565684	ADAMTSL4-AS1	Q5T5F5	129 aa		13.03	□□□□□ -0.32
KIFC3-223	ENST00000565684	SPANXB1	Q9NS25	103 aa	Predicted RBP	13.03	□□□□□ -0.32
KIFC3-223	ENST00000565684	NDUFC2	O95298	119 aa		13.02	□□□□□ -0.33
KIFC3-223	ENST00000565684	CTAG1A	P78358	180 aa		13.02	□□□□□ -0.33
KIFC3-223	ENST00000565684	MIEN1	Q9BRT3	115 aa		13.01	□□□□□ -0.33
KIFC3-223	ENST00000565684	PPDPF	Q9H3Y8	114 aa		13	□□□□□ -0.33
KIFC3-223	ENST00000565684	ERC2-IT1	O76042	136 aa		12.99	□□□□□ -0.33
KIFC3-223	ENST00000565684	IGLV6-57	P01721	117 aa		12.99	□□□□□ -0.33
KIFC3-223	ENST00000565684	NPC2	P61916	151 aa		12.99	□□□□□ -0.33
KIFC3-223	ENST00000565684	LINC00483	Q53H64	154 aa		12.99	□□□□□ -0.33
KIFC3-223	ENST00000565684	LINC01545	Q5VT33	79 aa		12.99	□□□□□ -0.33
KIFC3-223	ENST00000565684		Q9BRP9	147 aa		12.99	□□□□□ -0.33
KIFC3-223	ENST00000565684	S100A12	P80511	92 aa		12.98	□□□□□ -0.33
KIFC3-223	ENST00000565684	MUC17	Q685J3	4493 aa		12.98	□□□□□ -0.33
KIFC3-223	ENST00000565684	LITAF	Q99732	161 aa		12.97	□□□□□ -0.33
KIFC3-223	ENST00000565684		Q6ZRX8	168 aa		12.96	□□□□□ -0.33
KIFC3-223	ENST00000565684	SPAG11A	Q6PDA7	123 aa		12.95	□□□□□ -0.34
KIFC3-223	ENST00000565684	S100A7L2	Q5SY68	101 aa		12.94	□□□□□ -0.34

Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms