RNA–Protein interactions for RNA: ENST00000565511.5

RAB40C-209, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 783 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-209ENST00000565511 YPEL4Q96NS1 127 aa13.76□□□□□ -0.21
RAB40C-209ENST00000565511 CHTOPQ9Y3Y2 248 aaKnown RBP13.76□□□□□ -0.21
RAB40C-209ENST00000565511 MUC17Q685J3 4493 aa13.75□□□□□ -0.21
RAB40C-209ENST00000565511 A0A0U1RRA0 63 aa13.75□□□□□ -0.21
RAB40C-209ENST00000565511 RPL24P83731 157 aaKnown RBP13.75□□□□□ -0.21
RAB40C-209ENST00000565511 TMEM223A0PJW6 202 aa13.74□□□□□ -0.21
RAB40C-209ENST00000565511 C3orf22Q8N5N4 141 aa13.74□□□□□ -0.21
RAB40C-209ENST00000565511 PLEKHB2Q96CS7 222 aa13.73□□□□□ -0.21
RAB40C-209ENST00000565511 LINC00158P58513 81 aa13.71□□□□□ -0.21
RAB40C-209ENST00000565511 IGKV2D-26A0A0A0MRZ7 120 aa13.7□□□□□ -0.22
RAB40C-209ENST00000565511 TRAV12-1A0A0B4J245 112 aa13.69□□□□□ -0.22
RAB40C-209ENST00000565511 SFTA2Q6UW10 78 aa13.69□□□□□ -0.22
RAB40C-209ENST00000565511 CBLN2Q8IUK8 224 aa13.69□□□□□ -0.22
RAB40C-209ENST00000565511 IFI27L1Q96BM0 104 aa13.69□□□□□ -0.22
RAB40C-209ENST00000565511 SNAPINO95295 136 aa13.68□□□□□ -0.22
RAB40C-209ENST00000565511 SMIM13P0DJ93 91 aa13.68□□□□□ -0.22
RAB40C-209ENST00000565511 HIGD2AQ9BW72 106 aa13.68□□□□□ -0.22
RAB40C-209ENST00000565511 SVBPQ8N300 66 aa13.67□□□□□ -0.22
RAB40C-209ENST00000565511 CHCHD1Q96BP2 118 aaKnown RBP13.66□□□□□ -0.22
RAB40C-209ENST00000565511 FAT4Q6V0I7 4981 aa13.65□□□□□ -0.22
RAB40C-209ENST00000565511 SPRR4Q96PI1 79 aa13.65□□□□□ -0.22
RAB40C-209ENST00000565511 FAM19A2Q8N3H0 131 aa13.64□□□□□ -0.23
RAB40C-209ENST00000565511 NCR3O14931 201 aa13.63□□□□□ -0.23
RAB40C-209ENST00000565511 BOD1L2Q8IYS8 172 aa13.62□□□□□ -0.23
RAB40C-209ENST00000565511 MIR7-3HGQ8N6C7 128 aa13.62□□□□□ -0.23
RAB40C-209ENST00000565511 NDUFA5Q16718 116 aa13.61□□□□□ -0.23
RAB40C-209ENST00000565511 TSPEAR-AS2P59090 65 aa13.6□□□□□ -0.23
RAB40C-209ENST00000565511 MEIG1Q5JSS6 88 aa13.6□□□□□ -0.23
RAB40C-209ENST00000565511 IGLV7-46A0A075B6I9 117 aa13.59□□□□□ -0.23
RAB40C-209ENST00000565511 LINC00310P59036 64 aa13.59□□□□□ -0.23
RAB40C-209ENST00000565511 TPRXLQ17RH7 258 aa13.59□□□□□ -0.23
RAB40C-209ENST00000565511 KRTAP4-16G5E9R7 235 aaPredicted RBP13.58□□□□□ -0.24
RAB40C-209ENST00000565511 PRYO14603 147 aa13.58□□□□□ -0.24
RAB40C-209ENST00000565511 SPRR1AP35321 89 aa13.58□□□□□ -0.24
RAB40C-209ENST00000565511 NDUFA12Q9UI09 145 aa13.57□□□□□ -0.24
RAB40C-209ENST00000565511 H0Y8G0 127 aa13.56□□□□□ -0.24
RAB40C-209ENST00000565511 KCNQ1DNQ9H478 68 aa13.56□□□□□ -0.24
RAB40C-209ENST00000565511 TRBV10-3A0A0K0K1G6 114 aa13.55□□□□□ -0.24
RAB40C-209ENST00000565511 HSBP1O75506 76 aa13.55□□□□□ -0.24
RAB40C-209ENST00000565511 HERV-K104P63124 156 aa13.54□□□□□ -0.24
RAB40C-209ENST00000565511 LINC00337Q8N6G1 96 aa13.54□□□□□ -0.24
RAB40C-209ENST00000565511 DAND5Q8N907 189 aa13.54□□□□□ -0.24
RAB40C-209ENST00000565511 SMCR5Q8TEV8 140 aa13.54□□□□□ -0.24
RAB40C-209ENST00000565511 ATP6V1G1O75348 118 aa13.53□□□□□ -0.24
RAB40C-209ENST00000565511 LCE2AQ5TA79 106 aaPredicted RBP13.53□□□□□ -0.24
RAB40C-209ENST00000565511 CDIP1Q9H305 208 aa13.53□□□□□ -0.24
RAB40C-209ENST00000565511 PPDPFQ9H3Y8 114 aa13.53□□□□□ -0.24
RAB40C-209ENST00000565511 CTAG1AP78358 180 aa13.52□□□□□ -0.25
RAB40C-209ENST00000565511 A0A0U1RQV1 116 aa13.51□□□□□ -0.25
RAB40C-209ENST00000565511 TRGC2P03986 189 aa13.51□□□□□ -0.25
RAB40C-209ENST00000565511 SERF1AO75920 110 aa13.5□□□□□ -0.25
RAB40C-209ENST00000565511 Q8NBF4 154 aa13.5□□□□□ -0.25
RAB40C-209ENST00000565511 ZNF706Q9Y5V0 76 aaPredicted RBP13.5□□□□□ -0.25
RAB40C-209ENST00000565511 MYMXA0A1B0GTQ4 84 aa13.49□□□□□ -0.25
RAB40C-209ENST00000565511 ETDCA0A1B0GVM5 59 aa13.48□□□□□ -0.25
RAB40C-209ENST00000565511 ERC2-IT1O76042 136 aa13.48□□□□□ -0.25
RAB40C-209ENST00000565511 PMCHL2Q9BQD1 86 aa13.48□□□□□ -0.25
RAB40C-209ENST00000565511 LEPROTO15243 131 aa13.47□□□□□ -0.25
RAB40C-209ENST00000565511 SPAG11AQ6PDA7 123 aa13.47□□□□□ -0.25
RAB40C-209ENST00000565511 B5MCH6 92 aa13.46□□□□□ -0.25
RAB40C-209ENST00000565511 LEPROTL1O95214 131 aa13.46□□□□□ -0.25
RAB40C-209ENST00000565511 LINC00483Q53H64 154 aa13.46□□□□□ -0.25
RAB40C-209ENST00000565511 LOC107984156A0A0G2JMH3 177 aa13.45□□□□□ -0.26
RAB40C-209ENST00000565511 ARL17AQ8IVW1 177 aa13.45□□□□□ -0.26
RAB40C-209ENST00000565511 Q9BRP9 147 aa13.43□□□□□ -0.26
RAB40C-209ENST00000565511 MAP1LC3CQ9BXW4 147 aa13.43□□□□□ -0.26
RAB40C-209ENST00000565511 LINC00587B1AMM8 73 aa13.42□□□□□ -0.26
RAB40C-209ENST00000565511 J3QQQ9 107 aa13.42□□□□□ -0.26
RAB40C-209ENST00000565511 GAGE2AQ6NT46 116 aa13.42□□□□□ -0.26
RAB40C-209ENST00000565511 EIF4EBP3O60516 100 aaPredicted RBP13.41□□□□□ -0.26
RAB40C-209ENST00000565511 FABP4P15090 132 aa13.41□□□□□ -0.26
RAB40C-209ENST00000565511 DDTP30046 118 aa13.41□□□□□ -0.26
RAB40C-209ENST00000565511 PLNP26678 52 aa13.4□□□□□ -0.26
RAB40C-209ENST00000565511 KRTAP13-3Q3SY46 172 aa13.4□□□□□ -0.26
RAB40C-209ENST00000565511 DPM2O94777 84 aa13.39□□□□□ -0.27
RAB40C-209ENST00000565511 C4orf48Q5BLP8 95 aa13.39□□□□□ -0.27
RAB40C-209ENST00000565511 SOSTDC1Q6X4U4 206 aa13.39□□□□□ -0.27
RAB40C-209ENST00000565511 FP248Q71RG6 208 aaPredicted RBP13.39□□□□□ -0.27
RAB40C-209ENST00000565511 KRTAP9-2Q9BYQ4 174 aa13.39□□□□□ -0.27
RAB40C-209ENST00000565511 TRBV10-2A0A0K0K1G8 114 aa13.38□□□□□ -0.27
RAB40C-209ENST00000565511 MOBPQ13875 183 aa13.38□□□□□ -0.27
RAB40C-209ENST00000565511 IGLV9-49A0A0B4J1Y8 123 aa13.36□□□□□ -0.27
RAB40C-209ENST00000565511 Q6ZRX8 168 aa13.36□□□□□ -0.27
RAB40C-209ENST00000565511 SPANXB1Q9NS25 103 aaPredicted RBP13.36□□□□□ -0.27
RAB40C-209ENST00000565511 IGLV6-57P01721 117 aa13.35□□□□□ -0.27
RAB40C-209ENST00000565511 IGKCP01834 107 aa13.35□□□□□ -0.27
RAB40C-209ENST00000565511 HSPB8Q9UJY1 196 aa13.35□□□□□ -0.27
RAB40C-209ENST00000565511 LGALS3P17931 250 aaKnown RBP13.34□□□□□ -0.27
RAB40C-209ENST00000565511 NPC2P61916 151 aa13.34□□□□□ -0.27
RAB40C-209ENST00000565511 ADAMTSL4-AS1Q5T5F5 129 aa13.34□□□□□ -0.27
RAB40C-209ENST00000565511 COLCA2A8K830 154 aa13.33□□□□□ -0.28
RAB40C-209ENST00000565511 SPINK1P00995 79 aa13.33□□□□□ -0.28
RAB40C-209ENST00000565511 NMUP48645 174 aa13.33□□□□□ -0.28
RAB40C-209ENST00000565511 HERVK_113P61574 105 aa13.33□□□□□ -0.28
RAB40C-209ENST00000565511 SLC7A5P1Q8MH63 180 aa13.31□□□□□ -0.28
RAB40C-209ENST00000565511 KRTAP4-1Q9BYQ7 146 aa13.31□□□□□ -0.28
RAB40C-209ENST00000565511 A0A0J9YXY3 114 aa13.3□□□□□ -0.28
RAB40C-209ENST00000565511 NDUFC2O95298 119 aa13.3□□□□□ -0.28
RAB40C-209ENST00000565511 S100A12P80511 92 aa13.3□□□□□ -0.28
RAB40C-209ENST00000565511 Q8N377 158 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms