RNA–Protein interactions for RNA: ENST00000565274.5

CAPN3-214, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 734 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-214ENST00000565274 CSPG4Q6UVK1 2322 aa3.52□□□□□ -1.85
CAPN3-214ENST00000565274 PRRC2AP48634 2157 aaKnown RBP3.51□□□□□ -1.85
CAPN3-214ENST00000565274 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.51□□□□□ -1.85
CAPN3-214ENST00000565274 A0A1B0GW54 56 aa3.51□□□□□ -1.85
CAPN3-214ENST00000565274 IGKV2-29A2NJV5 120 aaPredicted RBP3.51□□□□□ -1.85
CAPN3-214ENST00000565274 F8WEM9 126 aa3.51□□□□□ -1.85
CAPN3-214ENST00000565274 DEFB131AP59861 70 aa3.51□□□□□ -1.85
CAPN3-214ENST00000565274 RNASE13Q5GAN3 156 aaKnown RBP3.51□□□□□ -1.85
CAPN3-214ENST00000565274 B9D2Q9BPU9 175 aa3.51□□□□□ -1.85
CAPN3-214ENST00000565274 CDKN2A-AS1Q9UH64 79 aa3.51□□□□□ -1.85
CAPN3-214ENST00000565274 USP9YO00507 2555 aaPredicted RBP3.51□□□□□ -1.85
CAPN3-214ENST00000565274 USP9XQ93008 2570 aaPredicted RBP3.51□□□□□ -1.85
CAPN3-214ENST00000565274 ZFYVE26Q68DK2 2539 aa3.5□□□□□ -1.85
CAPN3-214ENST00000565274 DOPEY2Q9Y3R5 2298 aa3.5□□□□□ -1.85
CAPN3-214ENST00000565274 IGHV3-38A0A0C4DH36 116 aa3.5□□□□□ -1.85
CAPN3-214ENST00000565274 J3QKU1 62 aa3.5□□□□□ -1.85
CAPN3-214ENST00000565274 INSP01308 110 aa3.5□□□□□ -1.85
CAPN3-214ENST00000565274 IGKV3-20P01619 116 aa3.5□□□□□ -1.85
CAPN3-214ENST00000565274 MIFP14174 115 aa3.5□□□□□ -1.85
CAPN3-214ENST00000565274 PLA2G2AP14555 144 aa3.5□□□□□ -1.85
CAPN3-214ENST00000565274 NANOS2P60321 138 aaKnown RBP3.5□□□□□ -1.85
CAPN3-214ENST00000565274 REG3GQ6UW15 175 aa3.5□□□□□ -1.85
CAPN3-214ENST00000565274 CFAP46Q8IYW2 2715 aa3.5□□□□□ -1.85
CAPN3-214ENST00000565274 FAM208BQ5VWN6 2430 aa3.5□□□□□ -1.85
CAPN3-214ENST00000565274 ZNF462Q96JM2 2506 aa3.49□□□□□ -1.85
CAPN3-214ENST00000565274 IGHV3-73A0A0B4J1V6 119 aa3.49□□□□□ -1.85
CAPN3-214ENST00000565274 TRAV22A0A0B4J277 110 aa3.49□□□□□ -1.85
CAPN3-214ENST00000565274 A8MU10 97 aa3.49□□□□□ -1.85
CAPN3-214ENST00000565274 KRTAP16-1A8MUX0 517 aa3.49□□□□□ -1.85
CAPN3-214ENST00000565274 SMIM1B2RUZ4 78 aa3.49□□□□□ -1.85
CAPN3-214ENST00000565274 INAFM1C9JVW0 142 aa3.49□□□□□ -1.85
CAPN3-214ENST00000565274 IGLV1-51P01701 117 aa3.49□□□□□ -1.85
CAPN3-214ENST00000565274 IGKV2-30P06310 120 aa3.49□□□□□ -1.85
CAPN3-214ENST00000565274 RPL28P46779 137 aaKnown RBP3.49□□□□□ -1.85
CAPN3-214ENST00000565274 DEFB113Q30KQ7 82 aa3.49□□□□□ -1.85
CAPN3-214ENST00000565274 DYNLRB2Q8TF09 96 aa3.49□□□□□ -1.85
CAPN3-214ENST00000565274 ZNF625Q96I27 306 aaPredicted RBP3.49□□□□□ -1.85
CAPN3-214ENST00000565274 C22orf24Q9Y442 160 aa3.49□□□□□ -1.85
CAPN3-214ENST00000565274 KMT2BQ9UMN6 2715 aaPredicted RBP3.48□□□□□ -1.85
CAPN3-214ENST00000565274 hDV103S1A0JD37 113 aa3.48□□□□□ -1.85
CAPN3-214ENST00000565274 CRPP02741 224 aa3.48□□□□□ -1.85
CAPN3-214ENST00000565274 BAALC-AS2P0C853 105 aa3.48□□□□□ -1.85
CAPN3-214ENST00000565274 CHTF8P0CG12 524 aa3.48□□□□□ -1.85
CAPN3-214ENST00000565274 ODF3L2Q3SX64 289 aa3.48□□□□□ -1.85
CAPN3-214ENST00000565274 Q5VV11 94 aa3.48□□□□□ -1.85
CAPN3-214ENST00000565274 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.48□□□□□ -1.85
CAPN3-214ENST00000565274 TRBV6-4A0A1B0GX49 114 aa3.47□□□□□ -1.85
CAPN3-214ENST00000565274 HCG22E2RYF7 251 aa3.47□□□□□ -1.85
CAPN3-214ENST00000565274 RPL36AP83881 106 aaKnown RBP3.47□□□□□ -1.85
CAPN3-214ENST00000565274 COX6A2Q02221 97 aa3.47□□□□□ -1.85
CAPN3-214ENST00000565274 RPL36ALQ969Q0 106 aaKnown RBP3.47□□□□□ -1.85
CAPN3-214ENST00000565274 CYP4F30PQ9H0H9 118 aa3.47□□□□□ -1.85
CAPN3-214ENST00000565274 CDC42SE2Q9NRR3 84 aa3.47□□□□□ -1.85
CAPN3-214ENST00000565274 COL12A1Q99715 3063 aa3.46□□□□□ -1.86
CAPN3-214ENST00000565274 NAV2Q8IVL1 2488 aa3.46□□□□□ -1.86
CAPN3-214ENST00000565274 DNAL4O96015 105 aa3.46□□□□□ -1.86
CAPN3-214ENST00000565274 KRTAP10-6P60371 365 aaPredicted RBP3.46□□□□□ -1.86
CAPN3-214ENST00000565274 KRTAP5-11Q6L8G4 156 aa3.46□□□□□ -1.86
CAPN3-214ENST00000565274 Q6ZTC4 211 aa3.46□□□□□ -1.86
CAPN3-214ENST00000565274 CSNK1G2-AS1Q8NCQ2 148 aa3.46□□□□□ -1.86
CAPN3-214ENST00000565274 OBSCN-AS1Q96MR7 158 aa3.46□□□□□ -1.86
CAPN3-214ENST00000565274 RETNLBQ9BQ08 111 aa3.46□□□□□ -1.86
CAPN3-214ENST00000565274 CDC42SE1Q9NRR8 79 aa3.46□□□□□ -1.86
CAPN3-214ENST00000565274 FLNCQ14315 2725 aa3.46□□□□□ -1.86
CAPN3-214ENST00000565274 PTPN13Q12923 2485 aa3.46□□□□□ -1.86
CAPN3-214ENST00000565274 SORL1Q92673 2214 aa3.46□□□□□ -1.86
CAPN3-214ENST00000565274 ASH1LQ9NR48 2969 aaKnown RBP3.45□□□□□ -1.86
CAPN3-214ENST00000565274 MYO18BQ8IUG5 2567 aa3.45□□□□□ -1.86
CAPN3-214ENST00000565274 KRTAP4-16G5E9R7 235 aaPredicted RBP3.45□□□□□ -1.86
CAPN3-214ENST00000565274 H0YGX0 51 aa3.45□□□□□ -1.86
CAPN3-214ENST00000565274 GIG44P09565 113 aaPredicted RBP3.45□□□□□ -1.86
CAPN3-214ENST00000565274 EGFEM1PQ0D2K5 195 aa3.45□□□□□ -1.86
CAPN3-214ENST00000565274 C9orf116Q5BN46 136 aaPredicted RBP3.45□□□□□ -1.86
CAPN3-214ENST00000565274 ATP5EP2Q5VTU8 51 aa3.45□□□□□ -1.86
CAPN3-214ENST00000565274 NTM-AS1Q6ZSK4 140 aa3.45□□□□□ -1.86
CAPN3-214ENST00000565274 ADM2Q7Z4H4 148 aa3.45□□□□□ -1.86
CAPN3-214ENST00000565274 Q8N814 137 aa3.45□□□□□ -1.86
CAPN3-214ENST00000565274 SPTSSBQ8NFR3 76 aa3.45□□□□□ -1.86
CAPN3-214ENST00000565274 RMI2Q96E14 147 aa3.45□□□□□ -1.86
CAPN3-214ENST00000565274 NACAE9PAV3 2078 aa3.45□□□□□ -1.86
CAPN3-214ENST00000565274 UBR5O95071 2799 aaPredicted RBP3.45□□□□□ -1.86
CAPN3-214ENST00000565274 MYO9AB2RTY4 2548 aa3.44□□□□□ -1.86
CAPN3-214ENST00000565274 IGKV2-28A0A075B6P5 120 aa3.44□□□□□ -1.86
CAPN3-214ENST00000565274 A0A087WYN8 130 aa3.44□□□□□ -1.86
CAPN3-214ENST00000565274 TRBV10-3A0A0K0K1G6 114 aa3.44□□□□□ -1.86
CAPN3-214ENST00000565274 ERC2-IT1O76042 136 aa3.44□□□□□ -1.86
CAPN3-214ENST00000565274 IGKV2D-28P01615 120 aa3.44□□□□□ -1.86
CAPN3-214ENST00000565274 MOBPQ13875 183 aa3.44□□□□□ -1.86
CAPN3-214ENST00000565274 DEFB136Q30KP8 78 aa3.44□□□□□ -1.86
CAPN3-214ENST00000565274 MIR7-3HGQ8N6C7 128 aa3.44□□□□□ -1.86
CAPN3-214ENST00000565274 LINC00612Q8N6U2 182 aa3.44□□□□□ -1.86
CAPN3-214ENST00000565274 COX7B2Q8TF08 81 aa3.44□□□□□ -1.86
CAPN3-214ENST00000565274 C16orf74Q96GX8 76 aa3.44□□□□□ -1.86
CAPN3-214ENST00000565274 XAGE1AQ9HD64 81 aa3.44□□□□□ -1.86
CAPN3-214ENST00000565274 CHD6Q8TD26 2715 aa3.44□□□□□ -1.86
CAPN3-214ENST00000565274 LRRK2Q5S007 2527 aa3.43□□□□□ -1.86
CAPN3-214ENST00000565274 IGLV5-52A0A0A0MRZ9 124 aa3.43□□□□□ -1.86
CAPN3-214ENST00000565274 TRGV1A0A0A0MS02 117 aa3.43□□□□□ -1.86
CAPN3-214ENST00000565274 HTN1P15515 57 aa3.43□□□□□ -1.86
CAPN3-214ENST00000565274 Q6ZTI0 123 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms