RNA–Protein interactions for RNA: ENST00000565151.1

USB1-210, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 886 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-210ENST00000565151 TMEM170BQ5T4T1 132 aa8.62□□□□□ -1.03
USB1-210ENST00000565151 NKAPP1Q8N9T2 125 aa8.62□□□□□ -1.03
USB1-210ENST00000565151 TMEM223A0PJW6 202 aa8.61□□□□□ -1.03
USB1-210ENST00000565151 CHTOPQ9Y3Y2 248 aaKnown RBP8.61□□□□□ -1.03
USB1-210ENST00000565151 M0R378 163 aa8.6□□□□□ -1.03
USB1-210ENST00000565151 LINC00310P59036 64 aa8.6□□□□□ -1.03
USB1-210ENST00000565151 PRLHP81277 87 aa8.6□□□□□ -1.03
USB1-210ENST00000565151 CBLN2Q8IUK8 224 aa8.6□□□□□ -1.03
USB1-210ENST00000565151 IFI27L1Q96BM0 104 aa8.6□□□□□ -1.03
USB1-210ENST00000565151 COX17Q14061 63 aa8.59□□□□□ -1.03
USB1-210ENST00000565151 PRR4Q16378 134 aa8.59□□□□□ -1.03
USB1-210ENST00000565151 FAM19A2Q8N3H0 131 aa8.59□□□□□ -1.03
USB1-210ENST00000565151 TMEM126AQ9H061 195 aa8.59□□□□□ -1.03
USB1-210ENST00000565151 TRAV12-1A0A0B4J245 112 aa8.58□□□□□ -1.04
USB1-210ENST00000565151 CRYGAP11844 174 aa8.58□□□□□ -1.04
USB1-210ENST00000565151 UBE2AP49459 152 aa8.58□□□□□ -1.04
USB1-210ENST00000565151 TYMSOSQ8TAI1 123 aa8.58□□□□□ -1.04
USB1-210ENST00000565151 CHCHD1Q96BP2 118 aaKnown RBP8.58□□□□□ -1.04
USB1-210ENST00000565151 A0A0U1RRA0 63 aa8.57□□□□□ -1.04
USB1-210ENST00000565151 NDUFA5Q16718 116 aa8.57□□□□□ -1.04
USB1-210ENST00000565151 FAM19A1Q7Z5A9 133 aa8.55□□□□□ -1.04
USB1-210ENST00000565151 MUC17Q685J3 4493 aa8.54□□□□□ -1.04
USB1-210ENST00000565151 SMIM13P0DJ93 91 aa8.54□□□□□ -1.04
USB1-210ENST00000565151 LINC00158P58513 81 aa8.54□□□□□ -1.04
USB1-210ENST00000565151 TSPEAR-AS2P59090 65 aa8.54□□□□□ -1.04
USB1-210ENST00000565151 RPL24P83731 157 aaKnown RBP8.54□□□□□ -1.04
USB1-210ENST00000565151 FAM229BQ4G0N7 80 aa8.54□□□□□ -1.04
USB1-210ENST00000565151 PLEKHB2Q96CS7 222 aa8.54□□□□□ -1.04
USB1-210ENST00000565151 TRGC2P03986 189 aa8.53□□□□□ -1.04
USB1-210ENST00000565151 SFTA2Q6UW10 78 aa8.52□□□□□ -1.05
USB1-210ENST00000565151 C3orf22Q8N5N4 141 aa8.52□□□□□ -1.05
USB1-210ENST00000565151 RETNLBQ9BQ08 111 aa8.51□□□□□ -1.05
USB1-210ENST00000565151 HSBP1O75506 76 aa8.5□□□□□ -1.05
USB1-210ENST00000565151 SERF1AO75920 110 aa8.5□□□□□ -1.05
USB1-210ENST00000565151 SLC7A5P1Q8MH63 180 aa8.5□□□□□ -1.05
USB1-210ENST00000565151 MIR7-3HGQ8N6C7 128 aa8.5□□□□□ -1.05
USB1-210ENST00000565151 KRTAP4-16G5E9R7 235 aaPredicted RBP8.49□□□□□ -1.05
USB1-210ENST00000565151 H0Y8G0 127 aa8.48□□□□□ -1.05
USB1-210ENST00000565151 NCR3O14931 201 aa8.48□□□□□ -1.05
USB1-210ENST00000565151 SPRR1AP35321 89 aa8.48□□□□□ -1.05
USB1-210ENST00000565151 BOD1L2Q8IYS8 172 aa8.48□□□□□ -1.05
USB1-210ENST00000565151 LINC00304Q8N9R0 145 aa8.48□□□□□ -1.05
USB1-210ENST00000565151 PMCHL2Q9BQD1 86 aa8.48□□□□□ -1.05
USB1-210ENST00000565151 NDUFA12Q9UI09 145 aa8.48□□□□□ -1.05
USB1-210ENST00000565151 FAT4Q6V0I7 4981 aa8.47□□□□□ -1.05
USB1-210ENST00000565151 COLCA2A8K830 154 aa8.47□□□□□ -1.05
USB1-210ENST00000565151 HIGD2AQ9BW72 106 aa8.47□□□□□ -1.05
USB1-210ENST00000565151 MEIG1Q5JSS6 88 aa8.46□□□□□ -1.06
USB1-210ENST00000565151 DAND5Q8N907 189 aa8.46□□□□□ -1.06
USB1-210ENST00000565151 SPRR4Q96PI1 79 aa8.46□□□□□ -1.06
USB1-210ENST00000565151 IGKV2D-26A0A0A0MRZ7 120 aa8.45□□□□□ -1.06
USB1-210ENST00000565151 LEPROTL1O95214 131 aa8.45□□□□□ -1.06
USB1-210ENST00000565151 HERV-K104P63124 156 aa8.45□□□□□ -1.06
USB1-210ENST00000565151 KCNQ1DNQ9H478 68 aa8.45□□□□□ -1.06
USB1-210ENST00000565151 TRBV10-3A0A0K0K1G6 114 aa8.44□□□□□ -1.06
USB1-210ENST00000565151 EIF4EBP3O60516 100 aaPredicted RBP8.44□□□□□ -1.06
USB1-210ENST00000565151 FABP4P15090 132 aa8.44□□□□□ -1.06
USB1-210ENST00000565151 LOC107984156A0A0G2JMH3 177 aa8.43□□□□□ -1.06
USB1-210ENST00000565151 MYMXA0A1B0GTQ4 84 aa8.43□□□□□ -1.06
USB1-210ENST00000565151 A6NJY4 79 aa8.43□□□□□ -1.06
USB1-210ENST00000565151 PRYO14603 147 aa8.43□□□□□ -1.06
USB1-210ENST00000565151 LEPROTO15243 131 aa8.43□□□□□ -1.06
USB1-210ENST00000565151 ARL17AQ8IVW1 177 aa8.43□□□□□ -1.06
USB1-210ENST00000565151 LINC00337Q8N6G1 96 aa8.43□□□□□ -1.06
USB1-210ENST00000565151 SMCR5Q8TEV8 140 aa8.43□□□□□ -1.06
USB1-210ENST00000565151 J3QQQ9 107 aa8.41□□□□□ -1.06
USB1-210ENST00000565151 ERC2-IT1O76042 136 aa8.41□□□□□ -1.06
USB1-210ENST00000565151 ATP6V1G1O75348 118 aa8.4□□□□□ -1.06
USB1-210ENST00000565151 SOSTDC1Q6X4U4 206 aa8.4□□□□□ -1.06
USB1-210ENST00000565151 B5MCH6 92 aa8.39□□□□□ -1.07
USB1-210ENST00000565151 DPM2O94777 84 aa8.39□□□□□ -1.07
USB1-210ENST00000565151 PLNP26678 52 aa8.39□□□□□ -1.07
USB1-210ENST00000565151 PPDPFQ9H3Y8 114 aa8.39□□□□□ -1.07
USB1-210ENST00000565151 ADAMTSL4-AS1Q5T5F5 129 aa8.38□□□□□ -1.07
USB1-210ENST00000565151 Q9BRP9 147 aa8.38□□□□□ -1.07
USB1-210ENST00000565151 HSPB8Q9UJY1 196 aa8.38□□□□□ -1.07
USB1-210ENST00000565151 IGKCP01834 107 aa8.37□□□□□ -1.07
USB1-210ENST00000565151 LINC00483Q53H64 154 aa8.37□□□□□ -1.07
USB1-210ENST00000565151 IGLV7-46A0A075B6I9 117 aa8.36□□□□□ -1.07
USB1-210ENST00000565151 ETDCA0A1B0GVM5 59 aa8.36□□□□□ -1.07
USB1-210ENST00000565151 LINC00587B1AMM8 73 aa8.36□□□□□ -1.07
USB1-210ENST00000565151 TPRXLQ17RH7 258 aa8.36□□□□□ -1.07
USB1-210ENST00000565151 Q8NBF4 154 aa8.36□□□□□ -1.07
USB1-210ENST00000565151 MAP1LC3CQ9BXW4 147 aa8.36□□□□□ -1.07
USB1-210ENST00000565151 TRBV10-2A0A0K0K1G8 114 aa8.35□□□□□ -1.07
USB1-210ENST00000565151 A0A0J9YXY3 114 aa8.34□□□□□ -1.07
USB1-210ENST00000565151 IGLV6-57P01721 117 aa8.34□□□□□ -1.07
USB1-210ENST00000565151 DDTP30046 118 aa8.34□□□□□ -1.07
USB1-210ENST00000565151 CTAG1AP78358 180 aa8.34□□□□□ -1.07
USB1-210ENST00000565151 E9PLD3 99 aa8.33□□□□□ -1.08
USB1-210ENST00000565151 HIST1H2BKO60814 126 aa8.33□□□□□ -1.08
USB1-210ENST00000565151 HIST1H2BJP06899 126 aa8.33□□□□□ -1.08
USB1-210ENST00000565151 HIST1H2BOP23527 126 aa8.33□□□□□ -1.08
USB1-210ENST00000565151 HIST1H2BBP33778 126 aa8.33□□□□□ -1.08
USB1-210ENST00000565151 HIST1H2BDP58876 126 aa8.33□□□□□ -1.08
USB1-210ENST00000565151 NPC2P61916 151 aa8.33□□□□□ -1.08
USB1-210ENST00000565151 HIST1H2BCP62807 126 aa8.33□□□□□ -1.08
USB1-210ENST00000565151 HIST2H2BEQ16778 126 aa8.33□□□□□ -1.08
USB1-210ENST00000565151 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.33□□□□□ -1.08
USB1-210ENST00000565151 HIST1H2BHQ93079 126 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 96 ms