RNA–Protein interactions for RNA: ENST00000565023.1

VPS9D1-204, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 5

Gene VPS9D1, Length 775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-204ENST00000565023 ERG28Q9UKR5 140 aa8.32□□□□□ -1.08
VPS9D1-204ENST00000565023 LEPROTO15243 131 aa8.31□□□□□ -1.08
VPS9D1-204ENST00000565023 PFN2P35080 140 aa8.31□□□□□ -1.08
VPS9D1-204ENST00000565023 TSPEAR-AS2P59090 65 aa8.3□□□□□ -1.08
VPS9D1-204ENST00000565023 KRTAP10-8P60410 259 aa8.3□□□□□ -1.08
VPS9D1-204ENST00000565023 HERVK_113P61574 105 aa8.3□□□□□ -1.08
VPS9D1-204ENST00000565023 PLEKHB2Q96CS7 222 aa8.3□□□□□ -1.08
VPS9D1-204ENST00000565023 C22orf24Q9Y442 160 aa8.3□□□□□ -1.08
VPS9D1-204ENST00000565023 HERV-K104P63124 156 aa8.29□□□□□ -1.08
VPS9D1-204ENST00000565023 HIST3H2BBQ8N257 126 aa8.29□□□□□ -1.08
VPS9D1-204ENST00000565023 DIRC1Q969H9 104 aa8.29□□□□□ -1.08
VPS9D1-204ENST00000565023 NDUFA12Q9UI09 145 aa8.29□□□□□ -1.08
VPS9D1-204ENST00000565023 KRTDAPP60985 99 aa8.28□□□□□ -1.08
VPS9D1-204ENST00000565023 MYMXA0A1B0GTQ4 84 aa8.27□□□□□ -1.09
VPS9D1-204ENST00000565023 GAGE10A6NGK3 116 aa8.27□□□□□ -1.09
VPS9D1-204ENST00000565023 E9PLD3 99 aa8.27□□□□□ -1.09
VPS9D1-204ENST00000565023 J3QQQ9 107 aa8.27□□□□□ -1.09
VPS9D1-204ENST00000565023 SND1-IT1Q9HBX3 110 aa8.27□□□□□ -1.09
VPS9D1-204ENST00000565023 TP73-AS1Q9UF72 201 aa8.27□□□□□ -1.09
VPS9D1-204ENST00000565023 IGLV5-37A0A075B6J1 123 aa8.26□□□□□ -1.09
VPS9D1-204ENST00000565023 H0Y9J4 135 aa8.26□□□□□ -1.09
VPS9D1-204ENST00000565023 S100A6P06703 90 aa8.26□□□□□ -1.09
VPS9D1-204ENST00000565023 NMUP48645 174 aa8.26□□□□□ -1.09
VPS9D1-204ENST00000565023 LINC00158P58513 81 aa8.26□□□□□ -1.09
VPS9D1-204ENST00000565023 LBHQ53QV2 105 aaPredicted RBP8.26□□□□□ -1.09
VPS9D1-204ENST00000565023 PRR26Q8N8Z3 221 aa8.26□□□□□ -1.09
VPS9D1-204ENST00000565023 HIST1H2BLQ99880 126 aa8.26□□□□□ -1.09
VPS9D1-204ENST00000565023 LINC00587B1AMM8 73 aa8.25□□□□□ -1.09
VPS9D1-204ENST00000565023 SMIM13P0DJ93 91 aa8.25□□□□□ -1.09
VPS9D1-204ENST00000565023 MRPL55Q7Z7F7 128 aaKnown RBP8.25□□□□□ -1.09
VPS9D1-204ENST00000565023 A0A0U1RRA0 63 aa8.24□□□□□ -1.09
VPS9D1-204ENST00000565023 C20orf202A1L168 122 aa8.24□□□□□ -1.09
VPS9D1-204ENST00000565023 RPL37AP8A6NKH3 93 aa8.24□□□□□ -1.09
VPS9D1-204ENST00000565023 LGALS3P17931 250 aaKnown RBP8.24□□□□□ -1.09
VPS9D1-204ENST00000565023 S100A2P29034 98 aa8.24□□□□□ -1.09
VPS9D1-204ENST00000565023 MEIG1Q5JSS6 88 aa8.24□□□□□ -1.09
VPS9D1-204ENST00000565023 LINC00167Q96N53 147 aa8.23□□□□□ -1.09
VPS9D1-204ENST00000565023 VPREB1P12018 145 aa8.22□□□□□ -1.09
VPS9D1-204ENST00000565023 SNRPEP62304 92 aaKnown RBP8.22□□□□□ -1.09
VPS9D1-204ENST00000565023 NKAPP1Q8N9T2 125 aa8.22□□□□□ -1.09
VPS9D1-204ENST00000565023 C5orf52A6NGY3 159 aa8.21□□□□□ -1.1
VPS9D1-204ENST00000565023 AKR1D1P51857 326 aa8.21□□□□□ -1.1
VPS9D1-204ENST00000565023 RPL24P83731 157 aaKnown RBP8.21□□□□□ -1.1
VPS9D1-204ENST00000565023 MIR7-3HGQ8N6C7 128 aa8.21□□□□□ -1.1
VPS9D1-204ENST00000565023 Q8NDZ9 215 aa8.21□□□□□ -1.1
VPS9D1-204ENST00000565023 IGKV2D-26A0A0A0MRZ7 120 aa8.2□□□□□ -1.1
VPS9D1-204ENST00000565023 ZNF861PO60384 105 aa8.2□□□□□ -1.1
VPS9D1-204ENST00000565023 A0A0J9YXY3 114 aa8.19□□□□□ -1.1
VPS9D1-204ENST00000565023 IGKV2-28A0A075B6P5 120 aa8.18□□□□□ -1.1
VPS9D1-204ENST00000565023 LOC107984156A0A0G2JMH3 177 aa8.18□□□□□ -1.1
VPS9D1-204ENST00000565023 BCE1O60756 84 aa8.18□□□□□ -1.1
VPS9D1-204ENST00000565023 IGKV2D-28P01615 120 aa8.18□□□□□ -1.1
VPS9D1-204ENST00000565023 KRTAP1-4P0C5Y4 121 aa8.18□□□□□ -1.1
VPS9D1-204ENST00000565023 ARL17AQ8IVW1 177 aa8.18□□□□□ -1.1
VPS9D1-204ENST00000565023 ATOH7Q8N100 152 aa8.18□□□□□ -1.1
VPS9D1-204ENST00000565023 IGLV1-50A0A075B6I6 118 aa8.17□□□□□ -1.1
VPS9D1-204ENST00000565023 ANKRD39Q53RE8 183 aa8.17□□□□□ -1.1
VPS9D1-204ENST00000565023 DAND5Q8N907 189 aa8.17□□□□□ -1.1
VPS9D1-204ENST00000565023 RPL28P46779 137 aaKnown RBP8.16□□□□□ -1.1
VPS9D1-204ENST00000565023 UBE2AP49459 152 aa8.16□□□□□ -1.1
VPS9D1-204ENST00000565023 BOD1L2Q8IYS8 172 aa8.16□□□□□ -1.1
VPS9D1-204ENST00000565023 ZNF815PA8K554 130 aa8.15□□□□□ -1.1
VPS9D1-204ENST00000565023 ADAMTSL4-AS1Q5T5F5 129 aa8.15□□□□□ -1.1
VPS9D1-204ENST00000565023 TTTY13Q9BZ97 58 aa8.15□□□□□ -1.1
VPS9D1-204ENST00000565023 TIMM17BO60830 172 aa8.14□□□□□ -1.11
VPS9D1-204ENST00000565023 LITAFQ99732 161 aa8.14□□□□□ -1.11
VPS9D1-204ENST00000565023 M0R378 163 aa8.13□□□□□ -1.11
VPS9D1-204ENST00000565023 TMEM238C9JI98 176 aa8.12□□□□□ -1.11
VPS9D1-204ENST00000565023 PRLHP81277 87 aa8.12□□□□□ -1.11
VPS9D1-204ENST00000565023 SOSTDC1Q6X4U4 206 aa8.12□□□□□ -1.11
VPS9D1-204ENST00000565023 MIEN1Q9BRT3 115 aa8.12□□□□□ -1.11
VPS9D1-204ENST00000565023 ANAPC11Q9NYG5 84 aa8.12□□□□□ -1.11
VPS9D1-204ENST00000565023 EIF4EBP3O60516 100 aaPredicted RBP8.11□□□□□ -1.11
VPS9D1-204ENST00000565023 RPL13AP40429 203 aaKnown RBP8.11□□□□□ -1.11
VPS9D1-204ENST00000565023 FAM19A1Q7Z5A9 133 aa8.11□□□□□ -1.11
VPS9D1-204ENST00000565023 PCP2Q8IVA1 136 aa8.11□□□□□ -1.11
VPS9D1-204ENST00000565023 KRTAP9-2Q9BYQ4 174 aa8.11□□□□□ -1.11
VPS9D1-204ENST00000565023 NCR3O14931 201 aa8.1□□□□□ -1.11
VPS9D1-204ENST00000565023 NDUFC2O95298 119 aa8.1□□□□□ -1.11
VPS9D1-204ENST00000565023 SCGB1D1O95968 90 aa8.1□□□□□ -1.11
VPS9D1-204ENST00000565023 TMEM126AQ9H061 195 aa8.1□□□□□ -1.11
VPS9D1-204ENST00000565023 A0A087X002 238 aa8.09□□□□□ -1.11
VPS9D1-204ENST00000565023 TRBV10-2A0A0K0K1G8 114 aa8.09□□□□□ -1.11
VPS9D1-204ENST00000565023 HSBP1L1C9JCN9 74 aa8.09□□□□□ -1.11
VPS9D1-204ENST00000565023 TSPAN13O95857 204 aa8.09□□□□□ -1.11
VPS9D1-204ENST00000565023 SCGB1D4Q6XE38 83 aa8.09□□□□□ -1.11
VPS9D1-204ENST00000565023 KRTAP13-1Q8IUC0 172 aa8.09□□□□□ -1.11
VPS9D1-204ENST00000565023 NPC2P61916 151 aa8.08□□□□□ -1.12
VPS9D1-204ENST00000565023 LINC00308Q8TCZ7 52 aa8.08□□□□□ -1.12
VPS9D1-204ENST00000565023 SPANXB1Q9NS25 103 aaPredicted RBP8.08□□□□□ -1.12
VPS9D1-204ENST00000565023 CRYGAP11844 174 aa8.07□□□□□ -1.12
VPS9D1-204ENST00000565023 TYMSOSQ8TAI1 123 aa8.07□□□□□ -1.12
VPS9D1-204ENST00000565023 SPANXDQ9BXN6 97 aa8.07□□□□□ -1.12
VPS9D1-204ENST00000565023 KCNQ1DNQ9H478 68 aa8.07□□□□□ -1.12
VPS9D1-204ENST00000565023 SPANXCQ9NY87 97 aa8.07□□□□□ -1.12
VPS9D1-204ENST00000565023 TRBV10-3A0A0K0K1G6 114 aa8.06□□□□□ -1.12
VPS9D1-204ENST00000565023 PRYO14603 147 aa8.06□□□□□ -1.12
VPS9D1-204ENST00000565023 PRR4Q16378 134 aa8.05□□□□□ -1.12
VPS9D1-204ENST00000565023 FAT4Q6V0I7 4981 aa8.04□□□□□ -1.12
VPS9D1-204ENST00000565023 KRTAP9-6A0A140TA67 174 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms