RNA–Protein interactions for RNA: ENST00000564752.1

CLN6-204, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 900 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-204ENST00000564752 LINC00158P58513 81 aa10.99□□□□□ -0.65
CLN6-204ENST00000564752 LINC00310P59036 64 aa10.99□□□□□ -0.65
CLN6-204ENST00000564752 UBE2AP49459 152 aa10.98□□□□□ -0.65
CLN6-204ENST00000564752 A0A0U1RRA0 63 aa10.96□□□□□ -0.65
CLN6-204ENST00000564752 COLCA2A8K830 154 aa10.96□□□□□ -0.65
CLN6-204ENST00000564752 PRR4Q16378 134 aa10.96□□□□□ -0.65
CLN6-204ENST00000564752 MEIG1Q5JSS6 88 aa10.95□□□□□ -0.66
CLN6-204ENST00000564752 HSPB8Q9UJY1 196 aa10.95□□□□□ -0.66
CLN6-204ENST00000564752 ATP6V1G1O75348 118 aa10.94□□□□□ -0.66
CLN6-204ENST00000564752 HERV-K104P63124 156 aa10.94□□□□□ -0.66
CLN6-204ENST00000564752 Q8NDZ9 215 aa10.94□□□□□ -0.66
CLN6-204ENST00000564752 SMIM13P0DJ93 91 aa10.93□□□□□ -0.66
CLN6-204ENST00000564752 KRTAP13-1Q8IUC0 172 aa10.93□□□□□ -0.66
CLN6-204ENST00000564752 NDUFA12Q9UI09 145 aa10.93□□□□□ -0.66
CLN6-204ENST00000564752 TMEM238C9JI98 176 aa10.92□□□□□ -0.66
CLN6-204ENST00000564752 FABP4P15090 132 aa10.92□□□□□ -0.66
CLN6-204ENST00000564752 PLNP26678 52 aa10.92□□□□□ -0.66
CLN6-204ENST00000564752 TMEM126AQ9H061 195 aa10.92□□□□□ -0.66
CLN6-204ENST00000564752 PRLHP81277 87 aa10.91□□□□□ -0.66
CLN6-204ENST00000564752 FAM19A1Q7Z5A9 133 aa10.91□□□□□ -0.66
CLN6-204ENST00000564752 A0A087X002 238 aa10.9□□□□□ -0.66
CLN6-204ENST00000564752 MYMXA0A1B0GTQ4 84 aa10.9□□□□□ -0.66
CLN6-204ENST00000564752 LINC00587B1AMM8 73 aa10.9□□□□□ -0.66
CLN6-204ENST00000564752 MIR7-3HGQ8N6C7 128 aa10.9□□□□□ -0.66
CLN6-204ENST00000564752 M0R378 163 aa10.89□□□□□ -0.67
CLN6-204ENST00000564752 DPM2O94777 84 aa10.89□□□□□ -0.67
CLN6-204ENST00000564752 TSPAN13O95857 204 aa10.89□□□□□ -0.67
CLN6-204ENST00000564752 CRYGAP11844 174 aa10.89□□□□□ -0.67
CLN6-204ENST00000564752 HERVK_113P61574 105 aa10.89□□□□□ -0.67
CLN6-204ENST00000564752 LEPROTO15243 131 aa10.88□□□□□ -0.67
CLN6-204ENST00000564752 TSPEAR-AS2P59090 65 aa10.88□□□□□ -0.67
CLN6-204ENST00000564752 BOD1L2Q8IYS8 172 aa10.88□□□□□ -0.67
CLN6-204ENST00000564752 PLEKHB2Q96CS7 222 aa10.88□□□□□ -0.67
CLN6-204ENST00000564752 PMCHL2Q9BQD1 86 aa10.88□□□□□ -0.67
CLN6-204ENST00000564752 MAP1LC3CQ9BXW4 147 aa10.88□□□□□ -0.67
CLN6-204ENST00000564752 IGKCP01834 107 aa10.86□□□□□ -0.67
CLN6-204ENST00000564752 TYMSOSQ8TAI1 123 aa10.86□□□□□ -0.67
CLN6-204ENST00000564752 NCR3O14931 201 aa10.85□□□□□ -0.67
CLN6-204ENST00000564752 ANAPC11Q9NYG5 84 aa10.85□□□□□ -0.67
CLN6-204ENST00000564752 J3QQQ9 107 aa10.84□□□□□ -0.67
CLN6-204ENST00000564752 HIST1H2BKO60814 126 aa10.83□□□□□ -0.68
CLN6-204ENST00000564752 HIST1H2BJP06899 126 aa10.83□□□□□ -0.68
CLN6-204ENST00000564752 LGALS3P17931 250 aaKnown RBP10.83□□□□□ -0.68
CLN6-204ENST00000564752 HIST1H2BOP23527 126 aa10.83□□□□□ -0.68
CLN6-204ENST00000564752 HIST1H2BBP33778 126 aa10.83□□□□□ -0.68
CLN6-204ENST00000564752 HIST1H2BDP58876 126 aa10.83□□□□□ -0.68
CLN6-204ENST00000564752 HIST1H2BCP62807 126 aa10.83□□□□□ -0.68
CLN6-204ENST00000564752 HIST2H2BEQ16778 126 aa10.83□□□□□ -0.68
CLN6-204ENST00000564752 FAM229BQ4G0N7 80 aa10.83□□□□□ -0.68
CLN6-204ENST00000564752 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.83□□□□□ -0.68
CLN6-204ENST00000564752 HIST1H2BHQ93079 126 aa10.83□□□□□ -0.68
CLN6-204ENST00000564752 HIST1H2BNQ99877 126 aa10.83□□□□□ -0.68
CLN6-204ENST00000564752 HIST1H2BMQ99879 126 aa10.83□□□□□ -0.68
CLN6-204ENST00000564752 IGKV2D-26A0A0A0MRZ7 120 aa10.82□□□□□ -0.68
CLN6-204ENST00000564752 PRYO14603 147 aa10.82□□□□□ -0.68
CLN6-204ENST00000564752 NMUP48645 174 aa10.82□□□□□ -0.68
CLN6-204ENST00000564752 KRTAP13-2Q52LG2 175 aa10.81□□□□□ -0.68
CLN6-204ENST00000564752 DAND5Q8N907 189 aa10.81□□□□□ -0.68
CLN6-204ENST00000564752 HIGD2AQ9BW72 106 aa10.81□□□□□ -0.68
CLN6-204ENST00000564752 A0A0U1RQV1 116 aa10.8□□□□□ -0.68
CLN6-204ENST00000564752 MIEN1Q9BRT3 115 aa10.78□□□□□ -0.68
CLN6-204ENST00000564752 KRTAP9-2Q9BYQ4 174 aa10.78□□□□□ -0.68
CLN6-204ENST00000564752 TRBV10-3A0A0K0K1G6 114 aa10.77□□□□□ -0.69
CLN6-204ENST00000564752 SYS1-DBNDD2H3BUS1 97 aa10.77□□□□□ -0.69
CLN6-204ENST00000564752 S100A12P80511 92 aa10.77□□□□□ -0.69
CLN6-204ENST00000564752 KCNQ1DNQ9H478 68 aa10.77□□□□□ -0.69
CLN6-204ENST00000564752 LOC107984156A0A0G2JMH3 177 aa10.76□□□□□ -0.69
CLN6-204ENST00000564752 E9PLD3 99 aa10.76□□□□□ -0.69
CLN6-204ENST00000564752 ARL17AQ8IVW1 177 aa10.76□□□□□ -0.69
CLN6-204ENST00000564752 LINC00337Q8N6G1 96 aa10.76□□□□□ -0.69
CLN6-204ENST00000564752 ETDCA0A1B0GVM5 59 aa10.75□□□□□ -0.69
CLN6-204ENST00000564752 SPRR1AP35321 89 aa10.75□□□□□ -0.69
CLN6-204ENST00000564752 LINC00304Q8N9R0 145 aa10.74□□□□□ -0.69
CLN6-204ENST00000564752 FAT4Q6V0I7 4981 aa10.74□□□□□ -0.69
CLN6-204ENST00000564752 TRBV10-2A0A0K0K1G8 114 aa10.73□□□□□ -0.69
CLN6-204ENST00000564752 SPRR4Q96PI1 79 aa10.73□□□□□ -0.69
CLN6-204ENST00000564752 SPANXB1Q9NS25 103 aaPredicted RBP10.73□□□□□ -0.69
CLN6-204ENST00000564752 ZNF706Q9Y5V0 76 aaPredicted RBP10.73□□□□□ -0.69
CLN6-204ENST00000564752 A0A0J9YXY3 114 aa10.72□□□□□ -0.69
CLN6-204ENST00000564752 DDTP30046 118 aa10.72□□□□□ -0.69
CLN6-204ENST00000564752 LINC01545Q5VT33 79 aa10.72□□□□□ -0.69
CLN6-204ENST00000564752 KRTAP4-16G5E9R7 235 aaPredicted RBP10.71□□□□□ -0.69
CLN6-204ENST00000564752 PET117Q6UWS5 81 aa10.71□□□□□ -0.69
CLN6-204ENST00000564752 RETNLBQ9BQ08 111 aa10.71□□□□□ -0.69
CLN6-204ENST00000564752 MUC17Q685J3 4493 aa10.7□□□□□ -0.7
CLN6-204ENST00000564752 NDUFC2O95298 119 aa10.7□□□□□ -0.7
CLN6-204ENST00000564752 NPC2P61916 151 aa10.7□□□□□ -0.7
CLN6-204ENST00000564752 CTAG1AP78358 180 aa10.69□□□□□ -0.7
CLN6-204ENST00000564752 S100A7L2Q5SY68 101 aa10.69□□□□□ -0.7
CLN6-204ENST00000564752 C3orf22Q8N5N4 141 aa10.69□□□□□ -0.7
CLN6-204ENST00000564752 SMCR5Q8TEV8 140 aa10.68□□□□□ -0.7
CLN6-204ENST00000564752 C3orf79P0CE67 100 aa10.67□□□□□ -0.7
CLN6-204ENST00000564752 COA6Q5JTJ3 125 aaKnown RBP10.67□□□□□ -0.7
CLN6-204ENST00000564752 ADAMTSL4-AS1Q5T5F5 129 aa10.67□□□□□ -0.7
CLN6-204ENST00000564752 SOSTDC1Q6X4U4 206 aa10.67□□□□□ -0.7
CLN6-204ENST00000564752 B5MCH6 92 aa10.66□□□□□ -0.7
CLN6-204ENST00000564752 KRTDAPP60985 99 aa10.66□□□□□ -0.7
CLN6-204ENST00000564752 IGLV6-57P01721 117 aa10.65□□□□□ -0.7
CLN6-204ENST00000564752 ZNF815PA8K554 130 aa10.64□□□□□ -0.71
CLN6-204ENST00000564752 EIF4EBP3O60516 100 aaPredicted RBP10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms