RNA–Protein interactions for RNA: ENST00000564060.5

CMTM3-207, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2 BASIC

Gene CMTM3, Length 824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-207ENST00000564060 VPREB1P12018 145 aa12□□□□□ -0.49
CMTM3-207ENST00000564060 NDUFA12Q9UI09 145 aa12□□□□□ -0.49
CMTM3-207ENST00000564060 IGLV1-50A0A075B6I6 118 aa11.99□□□□□ -0.49
CMTM3-207ENST00000564060 MYMXA0A1B0GTQ4 84 aa11.99□□□□□ -0.49
CMTM3-207ENST00000564060 HIST1H2BKO60814 126 aa11.99□□□□□ -0.49
CMTM3-207ENST00000564060 HIST1H2BJP06899 126 aa11.99□□□□□ -0.49
CMTM3-207ENST00000564060 HIST1H2BOP23527 126 aa11.99□□□□□ -0.49
CMTM3-207ENST00000564060 HIST1H2BBP33778 126 aa11.99□□□□□ -0.49
CMTM3-207ENST00000564060 HIST1H2BDP58876 126 aa11.99□□□□□ -0.49
CMTM3-207ENST00000564060 HIST1H2BCP62807 126 aa11.99□□□□□ -0.49
CMTM3-207ENST00000564060 HIST2H2BEQ16778 126 aa11.99□□□□□ -0.49
CMTM3-207ENST00000564060 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.99□□□□□ -0.49
CMTM3-207ENST00000564060 HIST1H2BHQ93079 126 aa11.99□□□□□ -0.49
CMTM3-207ENST00000564060 PLEKHB2Q96CS7 222 aa11.99□□□□□ -0.49
CMTM3-207ENST00000564060 HIST1H2BNQ99877 126 aa11.99□□□□□ -0.49
CMTM3-207ENST00000564060 HIST1H2BMQ99879 126 aa11.99□□□□□ -0.49
CMTM3-207ENST00000564060 IGKCP01834 107 aa11.98□□□□□ -0.49
CMTM3-207ENST00000564060 LEPROTO15243 131 aa11.97□□□□□ -0.49
CMTM3-207ENST00000564060 IGKV2-28A0A075B6P5 120 aa11.96□□□□□ -0.49
CMTM3-207ENST00000564060 A0A0U1RRA0 63 aa11.96□□□□□ -0.49
CMTM3-207ENST00000564060 IGKV2D-28P01615 120 aa11.96□□□□□ -0.49
CMTM3-207ENST00000564060 SMIM13P0DJ93 91 aa11.96□□□□□ -0.49
CMTM3-207ENST00000564060 KRTAP1-4P0C5Y4 121 aa11.95□□□□□ -0.5
CMTM3-207ENST00000564060 RPL13AP40429 203 aaKnown RBP11.95□□□□□ -0.5
CMTM3-207ENST00000564060 PRR26Q8N8Z3 221 aa11.95□□□□□ -0.5
CMTM3-207ENST00000564060 NMUP48645 174 aa11.94□□□□□ -0.5
CMTM3-207ENST00000564060 UBE2AP49459 152 aa11.94□□□□□ -0.5
CMTM3-207ENST00000564060 J3QQQ9 107 aa11.93□□□□□ -0.5
CMTM3-207ENST00000564060 MIR7-3HGQ8N6C7 128 aa11.93□□□□□ -0.5
CMTM3-207ENST00000564060 PMCHL2Q9BQD1 86 aa11.93□□□□□ -0.5
CMTM3-207ENST00000564060 LGALS3P17931 250 aaKnown RBP11.92□□□□□ -0.5
CMTM3-207ENST00000564060 HMCN2Q8NDA2 5059 aa11.92□□□□□ -0.5
CMTM3-207ENST00000564060 SYS1-DBNDD2H3BUS1 97 aa11.9□□□□□ -0.5
CMTM3-207ENST00000564060 M0R378 163 aa11.9□□□□□ -0.5
CMTM3-207ENST00000564060 TSPEAR-AS2P59090 65 aa11.9□□□□□ -0.5
CMTM3-207ENST00000564060 BOD1L2Q8IYS8 172 aa11.9□□□□□ -0.5
CMTM3-207ENST00000564060 TMEM126AQ9H061 195 aa11.9□□□□□ -0.5
CMTM3-207ENST00000564060 KRTAP13-1Q8IUC0 172 aa11.89□□□□□ -0.51
CMTM3-207ENST00000564060 Q8NDZ9 215 aa11.89□□□□□ -0.51
CMTM3-207ENST00000564060 IGKV2D-26A0A0A0MRZ7 120 aa11.88□□□□□ -0.51
CMTM3-207ENST00000564060 FAM19A1Q7Z5A9 133 aa11.88□□□□□ -0.51
CMTM3-207ENST00000564060 PET117Q6UWS5 81 aa11.87□□□□□ -0.51
CMTM3-207ENST00000564060 TMEM238C9JI98 176 aa11.86□□□□□ -0.51
CMTM3-207ENST00000564060 E9PLD3 99 aa11.86□□□□□ -0.51
CMTM3-207ENST00000564060 COA6Q5JTJ3 125 aaKnown RBP11.86□□□□□ -0.51
CMTM3-207ENST00000564060 MIEN1Q9BRT3 115 aa11.86□□□□□ -0.51
CMTM3-207ENST00000564060 PRLHP81277 87 aa11.85□□□□□ -0.51
CMTM3-207ENST00000564060 LINC01545Q5VT33 79 aa11.85□□□□□ -0.51
CMTM3-207ENST00000564060 S100A12P80511 92 aa11.84□□□□□ -0.51
CMTM3-207ENST00000564060 LOC107984156A0A0G2JMH3 177 aa11.83□□□□□ -0.52
CMTM3-207ENST00000564060 PRYO14603 147 aa11.83□□□□□ -0.52
CMTM3-207ENST00000564060 CRYGAP11844 174 aa11.83□□□□□ -0.52
CMTM3-207ENST00000564060 ARL17AQ8IVW1 177 aa11.83□□□□□ -0.52
CMTM3-207ENST00000564060 NCR3O14931 201 aa11.82□□□□□ -0.52
CMTM3-207ENST00000564060 DAND5Q8N907 189 aa11.81□□□□□ -0.52
CMTM3-207ENST00000564060 S100A1P23297 94 aa11.8□□□□□ -0.52
CMTM3-207ENST00000564060 TRBV10-2A0A0K0K1G8 114 aa11.79□□□□□ -0.52
CMTM3-207ENST00000564060 C3orf79P0CE67 100 aa11.79□□□□□ -0.52
CMTM3-207ENST00000564060 FAM229BQ4G0N7 80 aa11.79□□□□□ -0.52
CMTM3-207ENST00000564060 A0A0J9YXY3 114 aa11.78□□□□□ -0.52
CMTM3-207ENST00000564060 C20orf202A1L168 122 aa11.78□□□□□ -0.52
CMTM3-207ENST00000564060 KCNQ1DNQ9H478 68 aa11.78□□□□□ -0.52
CMTM3-207ENST00000564060 A0A087X002 238 aa11.77□□□□□ -0.53
CMTM3-207ENST00000564060 NDUFC2O95298 119 aa11.77□□□□□ -0.53
CMTM3-207ENST00000564060 KRTDAPP60985 99 aa11.77□□□□□ -0.53
CMTM3-207ENST00000564060 LINC00337Q8N6G1 96 aa11.77□□□□□ -0.53
CMTM3-207ENST00000564060 TYMSOSQ8TAI1 123 aa11.77□□□□□ -0.53
CMTM3-207ENST00000564060 SPANXB1Q9NS25 103 aaPredicted RBP11.77□□□□□ -0.53
CMTM3-207ENST00000564060 TRBV10-3A0A0K0K1G6 114 aa11.76□□□□□ -0.53
CMTM3-207ENST00000564060 HIGD2AQ9BW72 106 aa11.76□□□□□ -0.53
CMTM3-207ENST00000564060 SPRR1AP35321 89 aa11.75□□□□□ -0.53
CMTM3-207ENST00000564060 AKR1D1P51857 326 aa11.75□□□□□ -0.53
CMTM3-207ENST00000564060 ETDCA0A1B0GVM5 59 aa11.74□□□□□ -0.53
CMTM3-207ENST00000564060 DDTP30046 118 aa11.74□□□□□ -0.53
CMTM3-207ENST00000564060 ZNF706Q9Y5V0 76 aaPredicted RBP11.73□□□□□ -0.53
CMTM3-207ENST00000564060 TIMM17BO60830 172 aa11.72□□□□□ -0.53
CMTM3-207ENST00000564060 S100A7L2Q5SY68 101 aa11.72□□□□□ -0.53
CMTM3-207ENST00000564060 ZNF815PA8K554 130 aa11.71□□□□□ -0.53
CMTM3-207ENST00000564060 ANAPC11Q9NYG5 84 aa11.71□□□□□ -0.53
CMTM3-207ENST00000564060 ADAMTSL4-AS1Q5T5F5 129 aa11.7□□□□□ -0.54
CMTM3-207ENST00000564060 CBY1Q9Y3M2 126 aa11.7□□□□□ -0.54
CMTM3-207ENST00000564060 KRTAP4-16G5E9R7 235 aaPredicted RBP11.69□□□□□ -0.54
CMTM3-207ENST00000564060 NPC2P61916 151 aa11.69□□□□□ -0.54
CMTM3-207ENST00000564060 KRTAP13-2Q52LG2 175 aa11.68□□□□□ -0.54
CMTM3-207ENST00000564060 SOSTDC1Q6X4U4 206 aa11.68□□□□□ -0.54
CMTM3-207ENST00000564060 SPRR4Q96PI1 79 aa11.67□□□□□ -0.54
CMTM3-207ENST00000564060 SPANXCQ9NY87 97 aa11.67□□□□□ -0.54
CMTM3-207ENST00000564060 IGLV6-57P01721 117 aa11.66□□□□□ -0.54
CMTM3-207ENST00000564060 S100A2P29034 98 aa11.66□□□□□ -0.54
CMTM3-207ENST00000564060 LITAFQ99732 161 aa11.66□□□□□ -0.54
CMTM3-207ENST00000564060 LINC00308Q8TCZ7 52 aa11.65□□□□□ -0.54
CMTM3-207ENST00000564060 TRAV23DV6A0A075B6W5 121 aa11.64□□□□□ -0.55
CMTM3-207ENST00000564060 B5MCH6 92 aa11.64□□□□□ -0.55
CMTM3-207ENST00000564060 SCGB1D4Q6XE38 83 aa11.64□□□□□ -0.55
CMTM3-207ENST00000564060 LINC00304Q8N9R0 145 aa11.64□□□□□ -0.55
CMTM3-207ENST00000564060 SMCR5Q8TEV8 140 aa11.64□□□□□ -0.55
CMTM3-207ENST00000564060 TSPAN13O95857 204 aa11.63□□□□□ -0.55
CMTM3-207ENST00000564060 LRP2P98164 4655 aa11.63□□□□□ -0.55
CMTM3-207ENST00000564060 EIF4EBP3O60516 100 aaPredicted RBP11.62□□□□□ -0.55
CMTM3-207ENST00000564060 S100A6P06703 90 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms