RNA–Protein interactions for RNA: ENST00000563836.1

SMG1-209, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-209ENST00000563836 COL5A1-AS1Q5SY13 56 aa5.44□□□□□ -1.54
SMG1-209ENST00000563836 SPANXDQ9BXN6 97 aa5.44□□□□□ -1.54
SMG1-209ENST00000563836 SPANXCQ9NY87 97 aa5.44□□□□□ -1.54
SMG1-209ENST00000563836 HUWE1Q7Z6Z7 4374 aaKnown RBP5.43□□□□□ -1.54
SMG1-209ENST00000563836 A0A087WYN8 130 aa5.43□□□□□ -1.54
SMG1-209ENST00000563836 GVQW2A0A096LPI5 108 aaPredicted RBP5.43□□□□□ -1.54
SMG1-209ENST00000563836 A0A0U1RRA0 63 aa5.43□□□□□ -1.54
SMG1-209ENST00000563836 SMIM13P0DJ93 91 aa5.43□□□□□ -1.54
SMG1-209ENST00000563836 C2orf91Q6ZV80 131 aa5.43□□□□□ -1.54
SMG1-209ENST00000563836 SMIM29Q86T20 159 aa5.43□□□□□ -1.54
SMG1-209ENST00000563836 RAB37Q96AX2 223 aa5.43□□□□□ -1.54
SMG1-209ENST00000563836 TP73-AS1Q9UF72 201 aa5.43□□□□□ -1.54
SMG1-209ENST00000563836 M0R2N4 97 aa5.42□□□□□ -1.54
SMG1-209ENST00000563836 SYCNQ0VAF6 134 aa5.42□□□□□ -1.54
SMG1-209ENST00000563836 BVES-AS1Q5T3Y7 98 aa5.42□□□□□ -1.54
SMG1-209ENST00000563836 C6orf223Q8N319 242 aa5.42□□□□□ -1.54
SMG1-209ENST00000563836 CARD19Q96LW7 228 aa5.42□□□□□ -1.54
SMG1-209ENST00000563836 C1orf134Q5TEV5 83 aa5.41□□□□□ -1.54
SMG1-209ENST00000563836 C2orf82Q6UX34 121 aa5.41□□□□□ -1.54
SMG1-209ENST00000563836 MUSTN1Q8IVN3 82 aa5.41□□□□□ -1.54
SMG1-209ENST00000563836 MIR7-3HGQ8N6C7 128 aa5.41□□□□□ -1.54
SMG1-209ENST00000563836 NPC2P61916 151 aa5.4□□□□□ -1.54
SMG1-209ENST00000563836 KIAA0087Q14695 138 aa5.4□□□□□ -1.54
SMG1-209ENST00000563836 Q1RN00 199 aa5.4□□□□□ -1.54
SMG1-209ENST00000563836 LYRM7Q5U5X0 104 aa5.4□□□□□ -1.54
SMG1-209ENST00000563836 NHP2Q9NX24 153 aaKnown RBP5.4□□□□□ -1.54
SMG1-209ENST00000563836 DNAH9Q9NYC9 4486 aa5.4□□□□□ -1.55
SMG1-209ENST00000563836 A0A1B0GV90 55 aa5.39□□□□□ -1.55
SMG1-209ENST00000563836 KRTAP26-1Q6PEX3 210 aa5.39□□□□□ -1.55
SMG1-209ENST00000563836 UNQ6190/PRO20217Q6UXQ8 127 aa5.39□□□□□ -1.55
SMG1-209ENST00000563836 C15orf56Q8N910 161 aa5.39□□□□□ -1.55
SMG1-209ENST00000563836 LINC00308Q8TCZ7 52 aa5.39□□□□□ -1.55
SMG1-209ENST00000563836 SNHG12Q9BXW3 62 aa5.39□□□□□ -1.55
SMG1-209ENST00000563836 PPDPFQ9H3Y8 114 aa5.39□□□□□ -1.55
SMG1-209ENST00000563836 STAB2Q8WWQ8 2551 aa5.39□□□□□ -1.55
SMG1-209ENST00000563836 TRAV13-2A0A0B4J235 113 aa5.38□□□□□ -1.55
SMG1-209ENST00000563836 RPL18AQ02543 176 aaKnown RBP5.38□□□□□ -1.55
SMG1-209ENST00000563836 DAND5Q8N907 189 aa5.38□□□□□ -1.55
SMG1-209ENST00000563836 LINC00526Q96FQ7 95 aa5.38□□□□□ -1.55
SMG1-209ENST00000563836 SND1-IT1Q9HBX3 110 aa5.38□□□□□ -1.55
SMG1-209ENST00000563836 LOC107984640A0A0U1RRK4 108 aa5.37□□□□□ -1.55
SMG1-209ENST00000563836 NDUFC2-KCTD14E9PQ53 114 aa5.37□□□□□ -1.55
SMG1-209ENST00000563836 LECT2O14960 151 aa5.37□□□□□ -1.55
SMG1-209ENST00000563836 COX6CP09669 75 aa5.37□□□□□ -1.55
SMG1-209ENST00000563836 FXYD2P54710 66 aa5.37□□□□□ -1.55
SMG1-209ENST00000563836 Q6ZRU5 148 aa5.37□□□□□ -1.55
SMG1-209ENST00000563836 COL7A1Q02388 2944 aa5.37□□□□□ -1.55
SMG1-209ENST00000563836 MEGF8Q7Z7M0 2845 aa5.36□□□□□ -1.55
SMG1-209ENST00000563836 A0A0B4J2C4 111 aa5.36□□□□□ -1.55
SMG1-209ENST00000563836 PSMB2P49721 201 aa5.36□□□□□ -1.55
SMG1-209ENST00000563836 ADAMTSL4-AS1Q5T5F5 129 aa5.36□□□□□ -1.55
SMG1-209ENST00000563836 OR13C6PQ8NH95 151 aa5.36□□□□□ -1.55
SMG1-209ENST00000563836 LITAFQ99732 161 aa5.36□□□□□ -1.55
SMG1-209ENST00000563836 C6orf48Q9UBA6 75 aa5.36□□□□□ -1.55
SMG1-209ENST00000563836 PRO1854Q9UHT4 67 aa5.36□□□□□ -1.55
SMG1-209ENST00000563836 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.35□□□□□ -1.55
SMG1-209ENST00000563836 SNCGO76070 127 aa5.35□□□□□ -1.55
SMG1-209ENST00000563836 NDUFC2O95298 119 aa5.35□□□□□ -1.55
SMG1-209ENST00000563836 SCGB1C2P0DMR2 95 aa5.35□□□□□ -1.55
SMG1-209ENST00000563836 GAGE2EQ4V326 116 aa5.35□□□□□ -1.55
SMG1-209ENST00000563836 S100A7L2Q5SY68 101 aa5.35□□□□□ -1.55
SMG1-209ENST00000563836 NKAPP1Q8N9T2 125 aa5.35□□□□□ -1.55
SMG1-209ENST00000563836 GAGE2DQ9UEU5 116 aa5.35□□□□□ -1.55
SMG1-209ENST00000563836 M0QXV9 152 aa5.34□□□□□ -1.55
SMG1-209ENST00000563836 TLX1NBP0CAT3 122 aa5.34□□□□□ -1.55
SMG1-209ENST00000563836 CNBPP62633 177 aaKnown RBP5.34□□□□□ -1.55
SMG1-209ENST00000563836 GAGE2BQ13066 116 aa5.34□□□□□ -1.55
SMG1-209ENST00000563836 C9orf116Q5BN46 136 aaPredicted RBP5.34□□□□□ -1.55
SMG1-209ENST00000563836 Q6ZR54 194 aa5.34□□□□□ -1.55
SMG1-209ENST00000563836 DPH3Q96FX2 82 aa5.34□□□□□ -1.55
SMG1-209ENST00000563836 LINC00474Q9P2X8 69 aa5.34□□□□□ -1.55
SMG1-209ENST00000563836 DNHD1Q96M86 4753 aa5.33□□□□□ -1.56
SMG1-209ENST00000563836 H7C2G1 150 aa5.33□□□□□ -1.56
SMG1-209ENST00000563836 CFC1BP0CG36 223 aa5.33□□□□□ -1.56
SMG1-209ENST00000563836 CFC1P0CG37 223 aa5.33□□□□□ -1.56
SMG1-209ENST00000563836 FABP2P12104 132 aa5.33□□□□□ -1.56
SMG1-209ENST00000563836 Q8N814 137 aa5.33□□□□□ -1.56
SMG1-209ENST00000563836 A0A087WTM6 91 aa5.32□□□□□ -1.56
SMG1-209ENST00000563836 LOC107984156A0A0G2JMH3 177 aa5.32□□□□□ -1.56
SMG1-209ENST00000563836 A0A1B0GWB2 263 aa5.32□□□□□ -1.56
SMG1-209ENST00000563836 H3BUT2 72 aa5.32□□□□□ -1.56
SMG1-209ENST00000563836 RPL13AP40429 203 aaKnown RBP5.32□□□□□ -1.56
SMG1-209ENST00000563836 GTF2H5Q6ZYL4 71 aa5.32□□□□□ -1.56
SMG1-209ENST00000563836 ARL17AQ8IVW1 177 aa5.32□□□□□ -1.56
SMG1-209ENST00000563836 TMEM126AQ9H061 195 aa5.32□□□□□ -1.56
SMG1-209ENST00000563836 TRBV10-2A0A0K0K1G8 114 aa5.31□□□□□ -1.56
SMG1-209ENST00000563836 LCE6AA0A183 80 aa5.31□□□□□ -1.56
SMG1-209ENST00000563836 K7ERJ3 54 aa5.31□□□□□ -1.56
SMG1-209ENST00000563836 XAGE1AQ9HD64 81 aa5.31□□□□□ -1.56
SMG1-209ENST00000563836 V9GYY9 64 aa5.31□□□□□ -1.56
SMG1-209ENST00000563836 LRCOL1A6NCL2 159 aa5.3□□□□□ -1.56
SMG1-209ENST00000563836 M0R378 163 aa5.3□□□□□ -1.56
SMG1-209ENST00000563836 TAX1BP3O14907 124 aa5.3□□□□□ -1.56
SMG1-209ENST00000563836 Q6ZRN7 208 aaPredicted RBP5.3□□□□□ -1.56
SMG1-209ENST00000563836 Q6ZRP5 223 aa5.3□□□□□ -1.56
SMG1-209ENST00000563836 PRKDCP78527 4128 aaKnown RBP5.29□□□□□ -1.56
SMG1-209ENST00000563836 IGKV2-24A0A0C4DH68 120 aa5.29□□□□□ -1.56
SMG1-209ENST00000563836 C16orf90A8MZG2 172 aa5.29□□□□□ -1.56
SMG1-209ENST00000563836 NCR3O14931 201 aa5.29□□□□□ -1.56
SMG1-209ENST00000563836 TSPAN13O95857 204 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms