RNA–Protein interactions for RNA: ENST00000563829.5

SCAMP2-204, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 2

Gene SCAMP2, Length 3,162 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-204ENST00000563829 PLAC8L1A1L4L8 177 aa8.42□□□□□ -1.06
SCAMP2-204ENST00000563829 C9orf66Q5T8R8 295 aa8.42□□□□□ -1.06
SCAMP2-204ENST00000563829 HIGD2AQ9BW72 106 aa8.42□□□□□ -1.06
SCAMP2-204ENST00000563829 SONP18583 2426 aaKnown RBP8.42□□□□□ -1.06
SCAMP2-204ENST00000563829 DEFB130BP0DP73 79 aa8.42□□□□□ -1.06
SCAMP2-204ENST00000563829 DEFB130AP0DP74 79 aa8.42□□□□□ -1.06
SCAMP2-204ENST00000563829 WFDC10AQ9H1F0 79 aa8.42□□□□□ -1.06
SCAMP2-204ENST00000563829 SETXQ7Z333 2677 aaKnown RBP8.41□□□□□ -1.06
SCAMP2-204ENST00000563829 KIAA0087Q14695 138 aa8.41□□□□□ -1.06
SCAMP2-204ENST00000563829 COX17Q14061 63 aa8.41□□□□□ -1.06
SCAMP2-204ENST00000563829 LINC01006Q8NI28 216 aa8.4□□□□□ -1.06
SCAMP2-204ENST00000563829 C16orf74Q96GX8 76 aa8.4□□□□□ -1.06
SCAMP2-204ENST00000563829 NBEAL2Q6ZNJ1 2754 aa8.4□□□□□ -1.06
SCAMP2-204ENST00000563829 CCDC168Q8NDH2 2452 aa8.4□□□□□ -1.06
SCAMP2-204ENST00000563829 EPG5Q9HCE0 2579 aa8.4□□□□□ -1.06
SCAMP2-204ENST00000563829 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.4□□□□□ -1.07
SCAMP2-204ENST00000563829 CFAP46Q8IYW2 2715 aa8.4□□□□□ -1.07
SCAMP2-204ENST00000563829 APCP25054 2843 aa8.4□□□□□ -1.07
SCAMP2-204ENST00000563829 CD164L2Q6UWJ8 174 aa8.39□□□□□ -1.07
SCAMP2-204ENST00000563829 Q6ZTC4 211 aa8.39□□□□□ -1.07
SCAMP2-204ENST00000563829 PKD1L2Q7Z442 2459 aa8.39□□□□□ -1.07
SCAMP2-204ENST00000563829 GYPEP15421 78 aa8.38□□□□□ -1.07
SCAMP2-204ENST00000563829 GIG44P09565 113 aaPredicted RBP8.38□□□□□ -1.07
SCAMP2-204ENST00000563829 C10orf25Q5T742 122 aa8.38□□□□□ -1.07
SCAMP2-204ENST00000563829 UNQ6190/PRO20217Q6UXQ8 127 aa8.38□□□□□ -1.07
SCAMP2-204ENST00000563829 C4orf3Q8WVX3 66 aa8.38□□□□□ -1.07
SCAMP2-204ENST00000563829 CHCHD10Q8WYQ3 142 aaPredicted RBP8.37□□□□□ -1.07
SCAMP2-204ENST00000563829 ERC2-IT1O76042 136 aa8.37□□□□□ -1.07
SCAMP2-204ENST00000563829 OCR1Q9BZK8 76 aa8.37□□□□□ -1.07
SCAMP2-204ENST00000563829 IGKV4-1P06312 121 aa8.36□□□□□ -1.07
SCAMP2-204ENST00000563829 PMAIP1Q13794 54 aa8.36□□□□□ -1.07
SCAMP2-204ENST00000563829 CELA1Q9UNI1 258 aa8.36□□□□□ -1.07
SCAMP2-204ENST00000563829 ANGP03950 147 aaKnown RBP8.35□□□□□ -1.07
SCAMP2-204ENST00000563829 IGLV6-57P01721 117 aa8.35□□□□□ -1.07
SCAMP2-204ENST00000563829 DIRC1Q969H9 104 aa8.35□□□□□ -1.07
SCAMP2-204ENST00000563829 XAGE1AQ9HD64 81 aa8.35□□□□□ -1.07
SCAMP2-204ENST00000563829 C3orf84H3BNL1 204 aa8.34□□□□□ -1.07
SCAMP2-204ENST00000563829 NF1P21359 2839 aa8.34□□□□□ -1.07
SCAMP2-204ENST00000563829 IGHV4-28A0A0C4DH34 117 aa8.34□□□□□ -1.07
SCAMP2-204ENST00000563829 A0A1B0GUV1 79 aa8.34□□□□□ -1.07
SCAMP2-204ENST00000563829 PSPHP1O15172 72 aa8.34□□□□□ -1.07
SCAMP2-204ENST00000563829 FAM30AQ9NZY2 134 aa8.34□□□□□ -1.07
SCAMP2-204ENST00000563829 Q6YL49 198 aa8.34□□□□□ -1.07
SCAMP2-204ENST00000563829 NAV2Q8IVL1 2488 aa8.33□□□□□ -1.08
SCAMP2-204ENST00000563829 GCN1Q92616 2671 aaKnown RBP8.33□□□□□ -1.08
SCAMP2-204ENST00000563829 COX7BP24311 80 aa8.33□□□□□ -1.08
SCAMP2-204ENST00000563829 LINC01356Q8N9X3 169 aa8.33□□□□□ -1.08
SCAMP2-204ENST00000563829 ANKRD17O75179 2603 aaKnown RBP8.32□□□□□ -1.08
SCAMP2-204ENST00000563829 PRB2P02812 416 aaPredicted RBP8.32□□□□□ -1.08
SCAMP2-204ENST00000563829 KLK12Q9UKR0 248 aa8.32□□□□□ -1.08
SCAMP2-204ENST00000563829 TEX15Q9BXT5 2789 aa8.32□□□□□ -1.08
SCAMP2-204ENST00000563829 ZNF73O43830 326 aaPredicted RBP8.32□□□□□ -1.08
SCAMP2-204ENST00000563829 REG3AQ06141 175 aa8.32□□□□□ -1.08
SCAMP2-204ENST00000563829 SPAG11BQ08648 103 aa8.32□□□□□ -1.08
SCAMP2-204ENST00000563829 CYSRT1A8MQ03 144 aa8.31□□□□□ -1.08
SCAMP2-204ENST00000563829 IGHV4-31P0DP07 118 aa8.31□□□□□ -1.08
SCAMP2-204ENST00000563829 Q6ZRP5 223 aa8.31□□□□□ -1.08
SCAMP2-204ENST00000563829 PRR15Q8IV56 129 aa8.31□□□□□ -1.08
SCAMP2-204ENST00000563829 hDV103S1A0JD37 113 aa8.3□□□□□ -1.08
SCAMP2-204ENST00000563829 H3BQ85 93 aa8.3□□□□□ -1.08
SCAMP2-204ENST00000563829 ESM1Q9NQ30 184 aa8.3□□□□□ -1.08
SCAMP2-204ENST00000563829 NOTCH2Q04721 2471 aa8.3□□□□□ -1.08
SCAMP2-204ENST00000563829 PRR4Q16378 134 aa8.3□□□□□ -1.08
SCAMP2-204ENST00000563829 C1orf64Q8NEQ6 169 aa8.3□□□□□ -1.08
SCAMP2-204ENST00000563829 SMIM29Q86T20 159 aa8.29□□□□□ -1.08
SCAMP2-204ENST00000563829 LINC00612Q8N6U2 182 aa8.29□□□□□ -1.08
SCAMP2-204ENST00000563829 HIGD2BQ4VC39 106 aa8.28□□□□□ -1.08
SCAMP2-204ENST00000563829 CSNK1G2-AS1Q8NCQ2 148 aa8.28□□□□□ -1.08
SCAMP2-204ENST00000563829 CCL24O00175 119 aa8.27□□□□□ -1.09
SCAMP2-204ENST00000563829 MTORP42345 2549 aa8.27□□□□□ -1.09
SCAMP2-204ENST00000563829 ELOF1P60002 83 aaKnown RBP8.26□□□□□ -1.09
SCAMP2-204ENST00000563829 ZNF462Q96JM2 2506 aa8.26□□□□□ -1.09
SCAMP2-204ENST00000563829 Q6ZRU5 148 aa8.26□□□□□ -1.09
SCAMP2-204ENST00000563829 DEFB105AQ8NG35 78 aa8.26□□□□□ -1.09
SCAMP2-204ENST00000563829 IGSF10Q6WRI0 2623 aa8.24□□□□□ -1.09
SCAMP2-204ENST00000563829 Q1T7F1 81 aa8.24□□□□□ -1.09
SCAMP2-204ENST00000563829 PRO0255Q9UI72 69 aa8.24□□□□□ -1.09
SCAMP2-204ENST00000563829 TRAV22A0A0B4J277 110 aa8.24□□□□□ -1.09
SCAMP2-204ENST00000563829 A0A0J9YWU9 116 aa8.23□□□□□ -1.09
SCAMP2-204ENST00000563829 IGHV4-30-4P0DP06 118 aa8.23□□□□□ -1.09
SCAMP2-204ENST00000563829 ACANP16112 2415 aa8.22□□□□□ -1.09
SCAMP2-204ENST00000563829 A8MU10 97 aa8.22□□□□□ -1.09
SCAMP2-204ENST00000563829 C6orf48Q9UBA6 75 aa8.22□□□□□ -1.09
SCAMP2-204ENST00000563829 DEFB4AO15263 64 aa8.21□□□□□ -1.1
SCAMP2-204ENST00000563829 C19orf73Q9NVV2 129 aa8.2□□□□□ -1.1
SCAMP2-204ENST00000563829 A8MUN3 132 aa8.2□□□□□ -1.1
SCAMP2-204ENST00000563829 RETNQ9HD89 108 aa8.2□□□□□ -1.1
SCAMP2-204ENST00000563829 DOPEY1Q5JWR5 2465 aa8.19□□□□□ -1.1
SCAMP2-204ENST00000563829 DSCR9P59020 149 aa8.18□□□□□ -1.1
SCAMP2-204ENST00000563829 LINC00528Q8N1L1 170 aa8.18□□□□□ -1.1
SCAMP2-204ENST00000563829 FSHBP01225 129 aa8.18□□□□□ -1.1
SCAMP2-204ENST00000563829 CMC4P56277 68 aaPredicted RBP8.18□□□□□ -1.1
SCAMP2-204ENST00000563829 VPREB1P12018 145 aa8.16□□□□□ -1.1
SCAMP2-204ENST00000563829 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.16□□□□□ -1.1
SCAMP2-204ENST00000563829 KPRPQ5T749 579 aaPredicted RBP8.16□□□□□ -1.1
SCAMP2-204ENST00000563829 ST20-AS1Q8NBB2 130 aa8.15□□□□□ -1.1
SCAMP2-204ENST00000563829 ETDCA0A1B0GVM5 59 aa8.14□□□□□ -1.11
SCAMP2-204ENST00000563829 PSCAO43653 123 aa8.14□□□□□ -1.11
SCAMP2-204ENST00000563829 M0R378 163 aa8.14□□□□□ -1.11
SCAMP2-204ENST00000563829 HTN3P15516 51 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms