RNA–Protein interactions for RNA: ENST00000563790.5

HDGFL3-204, Transcript of HDGF like 3, humanhuman

TSL 3

Gene HDGFL3, Length 934 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-204ENST00000563790 A0A1B0GW15 77 aa5.39□□□□□ -1.55
HDGFL3-204ENST00000563790 IGIPA6NJ69 53 aa5.39□□□□□ -1.55
HDGFL3-204ENST00000563790 C9JQL5 133 aa5.39□□□□□ -1.55
HDGFL3-204ENST00000563790 F8VRH5 84 aa5.39□□□□□ -1.55
HDGFL3-204ENST00000563790 BLOC1S1P78537 153 aa5.39□□□□□ -1.55
HDGFL3-204ENST00000563790 Q6ZN92 141 aa5.39□□□□□ -1.55
HDGFL3-204ENST00000563790 CDKN2A-AS1Q9UH64 79 aa5.39□□□□□ -1.55
HDGFL3-204ENST00000563790 GAGE10A6NGK3 116 aa5.38□□□□□ -1.55
HDGFL3-204ENST00000563790 A6NN06 94 aa5.38□□□□□ -1.55
HDGFL3-204ENST00000563790 SCO1O75880 301 aa5.38□□□□□ -1.55
HDGFL3-204ENST00000563790 CKS1BP61024 79 aa5.38□□□□□ -1.55
HDGFL3-204ENST00000563790 PNRC1Q12796 327 aaPredicted RBP5.38□□□□□ -1.55
HDGFL3-204ENST00000563790 C6orf226Q5I0X4 101 aa5.38□□□□□ -1.55
HDGFL3-204ENST00000563790 LCE1AQ5T7P2 110 aa5.38□□□□□ -1.55
HDGFL3-204ENST00000563790 KRTAP5-7Q6L8G8 165 aa5.38□□□□□ -1.55
HDGFL3-204ENST00000563790 TEX43Q6ZNM6 134 aa5.38□□□□□ -1.55
HDGFL3-204ENST00000563790 SPRR2FQ96RM1 72 aa5.38□□□□□ -1.55
HDGFL3-204ENST00000563790 TOMM7Q9P0U1 55 aa5.38□□□□□ -1.55
HDGFL3-204ENST00000563790 PPBPP02775 128 aa5.37□□□□□ -1.55
HDGFL3-204ENST00000563790 MRPL54Q6P161 138 aaKnown RBP5.37□□□□□ -1.55
HDGFL3-204ENST00000563790 PLEKHB2Q96CS7 222 aa5.37□□□□□ -1.55
HDGFL3-204ENST00000563790 ALKBH7Q9BT30 221 aaPredicted RBP5.37□□□□□ -1.55
HDGFL3-204ENST00000563790 SMIM1B2RUZ4 78 aa5.36□□□□□ -1.55
HDGFL3-204ENST00000563790 SLC25A20O43772 301 aa5.36□□□□□ -1.55
HDGFL3-204ENST00000563790 PRSS2P07478 247 aa5.36□□□□□ -1.55
HDGFL3-204ENST00000563790 NPSP0C0P6 89 aa5.36□□□□□ -1.55
HDGFL3-204ENST00000563790 PRLHP81277 87 aa5.36□□□□□ -1.55
HDGFL3-204ENST00000563790 AKAP14Q86UN6 197 aa5.36□□□□□ -1.55
HDGFL3-204ENST00000563790 ORMDL3Q8N138 153 aa5.36□□□□□ -1.55
HDGFL3-204ENST00000563790 Q8NDZ9 215 aa5.36□□□□□ -1.55
HDGFL3-204ENST00000563790 RAB5AP20339 215 aa5.35□□□□□ -1.55
HDGFL3-204ENST00000563790 UBE2AP49459 152 aa5.35□□□□□ -1.55
HDGFL3-204ENST00000563790 RPS29P62273 56 aaKnown RBP5.35□□□□□ -1.55
HDGFL3-204ENST00000563790 TMEM136Q6ZRR5 245 aa5.35□□□□□ -1.55
HDGFL3-204ENST00000563790 Q8NBF4 154 aa5.35□□□□□ -1.55
HDGFL3-204ENST00000563790 PRELID3AQ96N28 172 aa5.35□□□□□ -1.55
HDGFL3-204ENST00000563790 IGKV2-28A0A075B6P5 120 aa5.34□□□□□ -1.55
HDGFL3-204ENST00000563790 IGLV5-45A0A087WSX0 123 aa5.34□□□□□ -1.55
HDGFL3-204ENST00000563790 C9orf92A6NGG3 77 aa5.34□□□□□ -1.55
HDGFL3-204ENST00000563790 TMEM238C9JI98 176 aa5.34□□□□□ -1.55
HDGFL3-204ENST00000563790 M0R378 163 aa5.34□□□□□ -1.55
HDGFL3-204ENST00000563790 IGKV2D-28P01615 120 aa5.34□□□□□ -1.55
HDGFL3-204ENST00000563790 CXCL5P42830 114 aa5.34□□□□□ -1.55
HDGFL3-204ENST00000563790 ADIRFQ15847 76 aa5.34□□□□□ -1.55
HDGFL3-204ENST00000563790 C2orf88Q9BSF0 95 aa5.34□□□□□ -1.55
HDGFL3-204ENST00000563790 TMEM126AQ9H061 195 aa5.34□□□□□ -1.55
HDGFL3-204ENST00000563790 CYSLTR1Q9Y271 337 aa5.34□□□□□ -1.55
HDGFL3-204ENST00000563790 KRTAP23-1A1A580 65 aa5.33□□□□□ -1.56
HDGFL3-204ENST00000563790 F8W036 122 aa5.33□□□□□ -1.56
HDGFL3-204ENST00000563790 VPREB1P12018 145 aa5.33□□□□□ -1.56
HDGFL3-204ENST00000563790 HERVK_113P63121 156 aa5.33□□□□□ -1.56
HDGFL3-204ENST00000563790 Q8N8P6 123 aa5.33□□□□□ -1.56
HDGFL3-204ENST00000563790 VCX2Q9H322 139 aa5.33□□□□□ -1.56
HDGFL3-204ENST00000563790 NAT8Q9UHE5 227 aa5.33□□□□□ -1.56
HDGFL3-204ENST00000563790 SPRR5A0A1B0GTR4 108 aa5.32□□□□□ -1.56
HDGFL3-204ENST00000563790 S100A8P05109 93 aa5.32□□□□□ -1.56
HDGFL3-204ENST00000563790 LAMTOR2Q9Y2Q5 125 aa5.32□□□□□ -1.56
HDGFL3-204ENST00000563790 LOC389332A0A1B0GUA5 103 aa5.31□□□□□ -1.56
HDGFL3-204ENST00000563790 C20orf202A1L168 122 aa5.31□□□□□ -1.56
HDGFL3-204ENST00000563790 RPL37P61927 97 aaKnown RBP5.31□□□□□ -1.56
HDGFL3-204ENST00000563790 PDZD11Q5EBL8 140 aa5.31□□□□□ -1.56
HDGFL3-204ENST00000563790 ATP5L2Q7Z4Y8 100 aa5.31□□□□□ -1.56
HDGFL3-204ENST00000563790 COX7B2Q8TF08 81 aa5.31□□□□□ -1.56
HDGFL3-204ENST00000563790 SPRR4Q96PI1 79 aa5.31□□□□□ -1.56
HDGFL3-204ENST00000563790 TIMM17AQ99595 171 aa5.31□□□□□ -1.56
HDGFL3-204ENST00000563790 FAM19A1Q7Z5A9 133 aa5.3□□□□□ -1.56
HDGFL3-204ENST00000563790 RAB5BP61020 215 aa5.29□□□□□ -1.56
HDGFL3-204ENST00000563790 SEC11AP67812 179 aa5.29□□□□□ -1.56
HDGFL3-204ENST00000563790 ORMDL2Q53FV1 153 aa5.29□□□□□ -1.56
HDGFL3-204ENST00000563790 NKAPP1Q8N9T2 125 aa5.29□□□□□ -1.56
HDGFL3-204ENST00000563790 TOMM6Q96B49 74 aa5.29□□□□□ -1.56
HDGFL3-204ENST00000563790 MAP1LC3AQ9H492 121 aa5.29□□□□□ -1.56
HDGFL3-204ENST00000563790 TINCRA0A1B0GVN0 87 aa5.28□□□□□ -1.56
HDGFL3-204ENST00000563790 K7EMI3 77 aa5.28□□□□□ -1.56
HDGFL3-204ENST00000563790 ADCYAP1P18509 176 aa5.28□□□□□ -1.56
HDGFL3-204ENST00000563790 GEMIN7Q9H840 131 aaKnown RBP5.28□□□□□ -1.56
HDGFL3-204ENST00000563790 IGLV5-39A0A0G2JS06 123 aa5.27□□□□□ -1.57
HDGFL3-204ENST00000563790 SPINK8P0C7L1 97 aa5.27□□□□□ -1.57
HDGFL3-204ENST00000563790 CBLN2Q8IUK8 224 aa5.27□□□□□ -1.57
HDGFL3-204ENST00000563790 SND1-IT1Q9HBX3 110 aa5.27□□□□□ -1.57
HDGFL3-204ENST00000563790 SCGB1D1O95968 90 aa5.26□□□□□ -1.57
HDGFL3-204ENST00000563790 ERASQ7Z444 233 aa5.26□□□□□ -1.57
HDGFL3-204ENST00000563790 C20orf166-AS1Q96NR2 134 aa5.26□□□□□ -1.57
HDGFL3-204ENST00000563790 GNB1LQ9BYB4 327 aa5.26□□□□□ -1.57
HDGFL3-204ENST00000563790 PAPPA-AS1Q5QFB9 102 aa5.25□□□□□ -1.57
HDGFL3-204ENST00000563790 HIGD2AQ9BW72 106 aa5.25□□□□□ -1.57
HDGFL3-204ENST00000563790 CST9LQ9H4G1 147 aa5.25□□□□□ -1.57
HDGFL3-204ENST00000563790 NXT2Q9NPJ8 142 aaKnown RBP5.25□□□□□ -1.57
HDGFL3-204ENST00000563790 LINC01546A6NGU7 62 aa5.24□□□□□ -1.57
HDGFL3-204ENST00000563790 LINC00483Q53H64 154 aa5.24□□□□□ -1.57
HDGFL3-204ENST00000563790 PFN2P35080 140 aa5.23□□□□□ -1.57
HDGFL3-204ENST00000563790 SPRR1AP35321 89 aa5.23□□□□□ -1.57
HDGFL3-204ENST00000563790 B5MCH6 92 aa5.22□□□□□ -1.57
HDGFL3-204ENST00000563790 ATP5LO75964 103 aa5.22□□□□□ -1.57
HDGFL3-204ENST00000563790 SMCR5Q8TEV8 140 aa5.22□□□□□ -1.57
HDGFL3-204ENST00000563790 SCGB3A1Q96QR1 104 aa5.22□□□□□ -1.57
HDGFL3-204ENST00000563790 ERG28Q9UKR5 140 aa5.22□□□□□ -1.57
HDGFL3-204ENST00000563790 IGLV6-57P01721 117 aa5.21□□□□□ -1.58
HDGFL3-204ENST00000563790 PEA15Q15121 130 aa5.21□□□□□ -1.58
HDGFL3-204ENST00000563790 ZNF625Q96I27 306 aaPredicted RBP5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 95 ms