RNA–Protein interactions for RNA: ENST00000563781.5

HERPUD1-207, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 3

Gene HERPUD1, Length 774 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-207ENST00000563781 MRPL35Q9NZE8 188 aaKnown RBP3.39□□□□□ -1.87
HERPUD1-207ENST00000563781 FAT1Q14517 4588 aa3.39□□□□□ -1.87
HERPUD1-207ENST00000563781 UBR4Q5T4S7 5183 aa3.39□□□□□ -1.87
HERPUD1-207ENST00000563781 HSPG2P98160 4391 aa3.38□□□□□ -1.87
HERPUD1-207ENST00000563781 IGHV1-58A0A0C4DH39 117 aa3.38□□□□□ -1.87
HERPUD1-207ENST00000563781 F8VRH5 84 aa3.38□□□□□ -1.87
HERPUD1-207ENST00000563781 SYS1-DBNDD2H3BUS1 97 aa3.38□□□□□ -1.87
HERPUD1-207ENST00000563781 HERVK_113P63121 156 aa3.38□□□□□ -1.87
HERPUD1-207ENST00000563781 SEC11AP67812 179 aa3.38□□□□□ -1.87
HERPUD1-207ENST00000563781 C4orf26Q17RF5 130 aa3.38□□□□□ -1.87
HERPUD1-207ENST00000563781 PRAC1Q96KF2 57 aa3.38□□□□□ -1.87
HERPUD1-207ENST00000563781 PMCHL2Q9BQD1 86 aa3.38□□□□□ -1.87
HERPUD1-207ENST00000563781 CHAC1Q9BUX1 264 aa3.38□□□□□ -1.87
HERPUD1-207ENST00000563781 CDKN2A-AS1Q9UH64 79 aa3.38□□□□□ -1.87
HERPUD1-207ENST00000563781 IGHV3-64A0A075B6Q5 118 aa3.37□□□□□ -1.87
HERPUD1-207ENST00000563781 GVQW2A0A096LPI5 108 aaPredicted RBP3.37□□□□□ -1.87
HERPUD1-207ENST00000563781 FUSP35637 526 aaKnown RBP eCLIP3.37□□□□□ -1.87
HERPUD1-207ENST00000563781 KRTDAPP60985 99 aa3.37□□□□□ -1.87
HERPUD1-207ENST00000563781 CD164Q04900 197 aa3.37□□□□□ -1.87
HERPUD1-207ENST00000563781 KIAA0087Q14695 138 aa3.37□□□□□ -1.87
HERPUD1-207ENST00000563781 HIGD2BQ4VC39 106 aa3.37□□□□□ -1.87
HERPUD1-207ENST00000563781 LINC01545Q5VT33 79 aa3.37□□□□□ -1.87
HERPUD1-207ENST00000563781 FAM19A5Q7Z5A7 132 aaPredicted RBP3.37□□□□□ -1.87
HERPUD1-207ENST00000563781 Q8N814 137 aa3.37□□□□□ -1.87
HERPUD1-207ENST00000563781 ABCA13Q86UQ4 5058 aa3.36□□□□□ -1.87
HERPUD1-207ENST00000563781 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.36□□□□□ -1.87
HERPUD1-207ENST00000563781 E9PLD3 99 aa3.36□□□□□ -1.87
HERPUD1-207ENST00000563781 DPM2O94777 84 aa3.36□□□□□ -1.87
HERPUD1-207ENST00000563781 SPINK8P0C7L1 97 aa3.36□□□□□ -1.87
HERPUD1-207ENST00000563781 PLNP26678 52 aa3.36□□□□□ -1.87
HERPUD1-207ENST00000563781 S100A2P29034 98 aa3.36□□□□□ -1.87
HERPUD1-207ENST00000563781 CKS1BP61024 79 aa3.36□□□□□ -1.87
HERPUD1-207ENST00000563781 SPAG11BQ08648 103 aa3.36□□□□□ -1.87
HERPUD1-207ENST00000563781 C14orf177Q52M58 125 aa3.36□□□□□ -1.87
HERPUD1-207ENST00000563781 OR10D4PQ8NGN7 298 aa3.36□□□□□ -1.87
HERPUD1-207ENST00000563781 OR13C6PQ8NH95 151 aa3.36□□□□□ -1.87
HERPUD1-207ENST00000563781 ORAOV1Q8WV07 137 aa3.36□□□□□ -1.87
HERPUD1-207ENST00000563781 LINC00526Q96FQ7 95 aa3.36□□□□□ -1.87
HERPUD1-207ENST00000563781 C14orf144Q96I85 54 aa3.36□□□□□ -1.87
HERPUD1-207ENST00000563781 TMEM223A0PJW6 202 aa3.35□□□□□ -1.87
HERPUD1-207ENST00000563781 APOMO95445 188 aa3.35□□□□□ -1.87
HERPUD1-207ENST00000563781 IGKCP01834 107 aa3.35□□□□□ -1.87
HERPUD1-207ENST00000563781 CNBPP62633 177 aaKnown RBP3.35□□□□□ -1.87
HERPUD1-207ENST00000563781 TMEM170BQ5T4T1 132 aa3.35□□□□□ -1.87
HERPUD1-207ENST00000563781 C1orf195Q5TG92 126 aa3.35□□□□□ -1.87
HERPUD1-207ENST00000563781 OCR1Q9BZK8 76 aa3.35□□□□□ -1.87
HERPUD1-207ENST00000563781 H3BRM9 83 aa3.34□□□□□ -1.87
HERPUD1-207ENST00000563781 TSPEAR-AS2P59090 65 aa3.34□□□□□ -1.87
HERPUD1-207ENST00000563781 Q6ZRU5 148 aa3.34□□□□□ -1.87
HERPUD1-207ENST00000563781 Q8IZM0 81 aa3.34□□□□□ -1.87
HERPUD1-207ENST00000563781 TOMM7Q9P0U1 55 aa3.34□□□□□ -1.87
HERPUD1-207ENST00000563781 PRO0628Q9UI54 55 aa3.34□□□□□ -1.87
HERPUD1-207ENST00000563781 VPS13BQ7Z7G8 4022 aa3.33□□□□□ -1.88
HERPUD1-207ENST00000563781 C20orf202A1L168 122 aa3.33□□□□□ -1.88
HERPUD1-207ENST00000563781 SYCNQ0VAF6 134 aa3.33□□□□□ -1.88
HERPUD1-207ENST00000563781 ADAMTSL4-AS1Q5T5F5 129 aa3.33□□□□□ -1.88
HERPUD1-207ENST00000563781 C2orf82Q6UX34 121 aa3.33□□□□□ -1.88
HERPUD1-207ENST00000563781 UNQ6190/PRO20217Q6UXQ8 127 aa3.33□□□□□ -1.88
HERPUD1-207ENST00000563781 SMIM29Q86T20 159 aa3.33□□□□□ -1.88
HERPUD1-207ENST00000563781 ATOH7Q8N100 152 aa3.33□□□□□ -1.88
HERPUD1-207ENST00000563781 C9orf163Q8N9P6 203 aa3.33□□□□□ -1.88
HERPUD1-207ENST00000563781 COX7B2Q8TF08 81 aa3.33□□□□□ -1.88
HERPUD1-207ENST00000563781 ZNF625Q96I27 306 aaPredicted RBP3.33□□□□□ -1.88
HERPUD1-207ENST00000563781 CARD19Q96LW7 228 aa3.33□□□□□ -1.88
HERPUD1-207ENST00000563781 C6orf48Q9UBA6 75 aa3.33□□□□□ -1.88
HERPUD1-207ENST00000563781 IGKV2D-26A0A0A0MRZ7 120 aa3.32□□□□□ -1.88
HERPUD1-207ENST00000563781 A6NDN8 102 aa3.32□□□□□ -1.88
HERPUD1-207ENST00000563781 NDUFA1O15239 70 aa3.32□□□□□ -1.88
HERPUD1-207ENST00000563781 LEPROTO15243 131 aa3.32□□□□□ -1.88
HERPUD1-207ENST00000563781 NDUFV3P56181 108 aaKnown RBP3.32□□□□□ -1.88
HERPUD1-207ENST00000563781 KRTAP10-1P60331 282 aa3.32□□□□□ -1.88
HERPUD1-207ENST00000563781 JOSD1Q15040 202 aaPredicted RBP3.32□□□□□ -1.88
HERPUD1-207ENST00000563781 SDIM1Q6ZPB5 146 aa3.32□□□□□ -1.88
HERPUD1-207ENST00000563781 Q6ZVH6 145 aa3.32□□□□□ -1.88
HERPUD1-207ENST00000563781 CAMK2N2Q96S95 79 aa3.32□□□□□ -1.88
HERPUD1-207ENST00000563781 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.31□□□□□ -1.88
HERPUD1-207ENST00000563781 TRBV30A0A0K0K1B3 111 aa3.31□□□□□ -1.88
HERPUD1-207ENST00000563781 FAM240AA0A1B0GVK7 77 aa3.31□□□□□ -1.88
HERPUD1-207ENST00000563781 KRTAP29-1A8MX34 341 aaPredicted RBP3.31□□□□□ -1.88
HERPUD1-207ENST00000563781 C16orf90A8MZG2 172 aa3.31□□□□□ -1.88
HERPUD1-207ENST00000563781 PANO1I0J062 215 aa3.31□□□□□ -1.88
HERPUD1-207ENST00000563781 J3QQQ9 107 aa3.31□□□□□ -1.88
HERPUD1-207ENST00000563781 CXCL5P42830 114 aa3.31□□□□□ -1.88
HERPUD1-207ENST00000563781 HERVK_113P61574 105 aa3.31□□□□□ -1.88
HERPUD1-207ENST00000563781 C9orf116Q5BN46 136 aaPredicted RBP3.31□□□□□ -1.88
HERPUD1-207ENST00000563781 PYY3Q5JQD4 70 aa3.31□□□□□ -1.88
HERPUD1-207ENST00000563781 Q6ZSA8 131 aa3.31□□□□□ -1.88
HERPUD1-207ENST00000563781 PLEKHB2Q96CS7 222 aa3.31□□□□□ -1.88
HERPUD1-207ENST00000563781 TLX1NBP0CAT3 122 aa3.3□□□□□ -1.88
HERPUD1-207ENST00000563781 CHTF8P0CG12 524 aa3.3□□□□□ -1.88
HERPUD1-207ENST00000563781 HIST1H4GQ99525 98 aa3.3□□□□□ -1.88
HERPUD1-207ENST00000563781 TTTY13Q9BZ97 58 aa3.3□□□□□ -1.88
HERPUD1-207ENST00000563781 NDUFA12Q9UI09 145 aa3.3□□□□□ -1.88
HERPUD1-207ENST00000563781 HERC1Q15751 4861 aa3.3□□□□□ -1.88
HERPUD1-207ENST00000563781 PKHD1L1Q86WI1 4243 aa3.29□□□□□ -1.88
HERPUD1-207ENST00000563781 A0A096LNI7 61 aa3.29□□□□□ -1.88
HERPUD1-207ENST00000563781 LOC107984640A0A0U1RRK4 108 aa3.29□□□□□ -1.88
HERPUD1-207ENST00000563781 LGALS3P17931 250 aaKnown RBP3.29□□□□□ -1.88
HERPUD1-207ENST00000563781 CIRBPQ14011 172 aaKnown RBP3.29□□□□□ -1.88
HERPUD1-207ENST00000563781 SPACA4Q8TDM5 124 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms