RNA–Protein interactions for RNA: ENST00000563688.5

SCAPER-208, Transcript of S-phase cyclin A associated protein in the ER, human

TSL 2

Gene SCAPER, Length 549 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCAPER-208	ENST00000563688	KALRN	O60229	2985 aa		-0.06	□□□□□ -2.42
SCAPER-208	ENST00000563688	NDUFB1	O75438	58 aa		-0.06	□□□□□ -2.42
SCAPER-208	ENST00000563688	C3orf79	P0CE67	100 aa		-0.06	□□□□□ -2.42
SCAPER-208	ENST00000563688	SMIM11A	P58511	58 aa		-0.06	□□□□□ -2.42
SCAPER-208	ENST00000563688	MT1H	P80294	61 aa		-0.06	□□□□□ -2.42
SCAPER-208	ENST00000563688	KLK9	Q2XQG4	91 aa		-0.06	□□□□□ -2.42
SCAPER-208	ENST00000563688	KRTAP19-7	Q3SYF9	63 aa		-0.06	□□□□□ -2.42
SCAPER-208	ENST00000563688	C10orf113	Q5VZT2	155 aa		-0.06	□□□□□ -2.42
SCAPER-208	ENST00000563688	C5orf38	Q86SI9	138 aa		-0.06	□□□□□ -2.42
SCAPER-208	ENST00000563688	DYNLRB1	Q9NP97	96 aa		-0.06	□□□□□ -2.42
SCAPER-208	ENST00000563688	CRIPT	Q9P021	101 aa		-0.06	□□□□□ -2.42
SCAPER-208	ENST00000563688	CDKN2A-AS1	Q9UH64	79 aa		-0.06	□□□□□ -2.42
SCAPER-208	ENST00000563688	LINC01558	Q9Y6Z2	57 aa		-0.06	□□□□□ -2.42
SCAPER-208	ENST00000563688	CCDC88B	A6NC98	1476 aa		-0.06	□□□□□ -2.42
SCAPER-208	ENST00000563688	POLA1	P09884	1462 aa	Predicted RBP	-0.06	□□□□□ -2.42
SCAPER-208	ENST00000563688	LRRC9	Q6ZRR7	1453 aa		-0.06	□□□□□ -2.42
SCAPER-208	ENST00000563688	MAGI1	Q96QZ7	1491 aa	Predicted RBP	-0.06	□□□□□ -2.42
SCAPER-208	ENST00000563688	PPRC1	Q5VV67	1664 aa	Known RBP	-0.06	□□□□□ -2.42
SCAPER-208	ENST00000563688	PRUNE2	Q8WUY3	3088 aa		-0.06	□□□□□ -2.42
SCAPER-208	ENST00000563688	EDC4	Q6P2E9	1401 aa	Known RBP	-0.06	□□□□□ -2.42
SCAPER-208	ENST00000563688	PPIP5K1	Q6PFW1	1433 aa		-0.06	□□□□□ -2.42
SCAPER-208	ENST00000563688	SPG11	Q96JI7	2443 aa		-0.06	□□□□□ -2.42
SCAPER-208	ENST00000563688	MGA	Q8IWI9	3026 aa		-0.06	□□□□□ -2.42
SCAPER-208	ENST00000563688	CNOT1	A5YKK6	2376 aa	Known RBP	-0.06	□□□□□ -2.42
SCAPER-208	ENST00000563688	FAM186A	A6NE01	2351 aa		-0.06	□□□□□ -2.42
SCAPER-208	ENST00000563688	EIF4G3	O43432	1585 aa	Known RBP	-0.06	□□□□□ -2.42
SCAPER-208	ENST00000563688	ERCC6L2	Q5T890	1561 aa		-0.06	□□□□□ -2.42
SCAPER-208	ENST00000563688	DIP2C	Q9Y2E4	1556 aa		-0.06	□□□□□ -2.42
SCAPER-208	ENST00000563688	CSPG4	Q6UVK1	2322 aa		-0.07	□□□□□ -2.42
SCAPER-208	ENST00000563688	PCNX1	Q96RV3	2341 aa		-0.07	□□□□□ -2.42
SCAPER-208	ENST00000563688	CEP290	O15078	2479 aa		-0.07	□□□□□ -2.42
SCAPER-208	ENST00000563688	FRYL	O94915	3013 aa		-0.07	□□□□□ -2.42
SCAPER-208	ENST00000563688	SPTA1	P02549	2419 aa		-0.07	□□□□□ -2.42
SCAPER-208	ENST00000563688	UTP20	O75691	2785 aa	Known RBP	-0.07	□□□□□ -2.42
SCAPER-208	ENST00000563688	FANCA	O15360	1455 aa		-0.07	□□□□□ -2.42
SCAPER-208	ENST00000563688	TRBV7-7	A0A0K0K1E9	115 aa		-0.07	□□□□□ -2.42
SCAPER-208	ENST00000563688	EFCAB10	A6NFE3	127 aa		-0.07	□□□□□ -2.42
SCAPER-208	ENST00000563688	NAP1L6	A6NFF2	107 aa		-0.07	□□□□□ -2.42
SCAPER-208	ENST00000563688	FAM24A	A6NFZ4	105 aa		-0.07	□□□□□ -2.42
SCAPER-208	ENST00000563688		I3L3M4	83 aa		-0.07	□□□□□ -2.42
SCAPER-208	ENST00000563688	MRPL33	O75394	65 aa	Known RBP	-0.07	□□□□□ -2.42
SCAPER-208	ENST00000563688	LEPROTL1	O95214	131 aa		-0.07	□□□□□ -2.42
SCAPER-208	ENST00000563688	SFT2D2	O95562	160 aa		-0.07	□□□□□ -2.42
SCAPER-208	ENST00000563688	APOC2	P02655	101 aa		-0.07	□□□□□ -2.42
SCAPER-208	ENST00000563688	S100P	P25815	95 aa		-0.07	□□□□□ -2.42
SCAPER-208	ENST00000563688	MT4	P47944	62 aa		-0.07	□□□□□ -2.42
SCAPER-208	ENST00000563688	MRPS10	P82664	201 aa	Known RBP	-0.07	□□□□□ -2.42
SCAPER-208	ENST00000563688	DEFB135	Q30KP9	77 aa		-0.07	□□□□□ -2.42
SCAPER-208	ENST00000563688	KRTAP20-2	Q3LI61	65 aa		-0.07	□□□□□ -2.42
SCAPER-208	ENST00000563688		Q56UQ5	140 aa		-0.07	□□□□□ -2.42
SCAPER-208	ENST00000563688	PSMG4	Q5JS54	123 aa		-0.07	□□□□□ -2.42
SCAPER-208	ENST00000563688	SPRR4	Q96PI1	79 aa		-0.07	□□□□□ -2.42
SCAPER-208	ENST00000563688	CGREF1	Q99674	301 aa		-0.07	□□□□□ -2.42
SCAPER-208	ENST00000563688	NXT2	Q9NPJ8	142 aa	Known RBP	-0.07	□□□□□ -2.42
SCAPER-208	ENST00000563688	HIGD1B	Q9P298	99 aa		-0.07	□□□□□ -2.42
SCAPER-208	ENST00000563688	CACFD1	Q9UGQ2	172 aa		-0.07	□□□□□ -2.42
SCAPER-208	ENST00000563688	UBE2D4	Q9Y2X8	147 aa		-0.07	□□□□□ -2.42
SCAPER-208	ENST00000563688	AP4S1	Q9Y587	144 aa		-0.07	□□□□□ -2.42
SCAPER-208	ENST00000563688	CENPE	Q02224	2701 aa		-0.07	□□□□□ -2.42
SCAPER-208	ENST00000563688	PTPN23	Q9H3S7	1636 aa		-0.07	□□□□□ -2.42
SCAPER-208	ENST00000563688	PDE4DIP	Q5VU43	2346 aa		-0.07	□□□□□ -2.42
SCAPER-208	ENST00000563688	C10orf71	Q711Q0	1435 aa		-0.07	□□□□□ -2.42
SCAPER-208	ENST00000563688	SPTAN1	Q13813	2472 aa	Known RBP	-0.07	□□□□□ -2.42
SCAPER-208	ENST00000563688	URB1	O60287	2271 aa	Known RBP	-0.07	□□□□□ -2.42
SCAPER-208	ENST00000563688	KTN1	Q86UP2	1357 aa	Known RBP	-0.07	□□□□□ -2.42
SCAPER-208	ENST00000563688	DNAJC13	O75165	2243 aa		-0.07	□□□□□ -2.42
SCAPER-208	ENST00000563688	EPRS	P07814	1512 aa	Known RBP	-0.08	□□□□□ -2.42
SCAPER-208	ENST00000563688	ROBO1	Q9Y6N7	1651 aa		-0.08	□□□□□ -2.42
SCAPER-208	ENST00000563688	A2ML1	A8K2U0	1454 aa		-0.08	□□□□□ -2.42
SCAPER-208	ENST00000563688	TEX14	Q8IWB6	1497 aa		-0.08	□□□□□ -2.42
SCAPER-208	ENST00000563688	PAPPA	Q13219	1627 aa		-0.08	□□□□□ -2.42
SCAPER-208	ENST00000563688	DNAH12	Q6ZR08	3092 aa		-0.08	□□□□□ -2.42
SCAPER-208	ENST00000563688		A0A0G2JND7	137 aa		-0.08	□□□□□ -2.42
SCAPER-208	ENST00000563688	UBE2L5P	A0A1B0GUS4	154 aa		-0.08	□□□□□ -2.42
SCAPER-208	ENST00000563688		A0A1B0GWA3	101 aa		-0.08	□□□□□ -2.42
SCAPER-208	ENST00000563688		H3BQF6	201 aa		-0.08	□□□□□ -2.42
SCAPER-208	ENST00000563688		I3L2K1	104 aa		-0.08	□□□□□ -2.42
SCAPER-208	ENST00000563688		K7EP13	123 aa		-0.08	□□□□□ -2.42
SCAPER-208	ENST00000563688	HMGN1	P05114	100 aa		-0.08	□□□□□ -2.42
SCAPER-208	ENST00000563688	ARMS2	P0C7Q2	107 aa		-0.08	□□□□□ -2.42
SCAPER-208	ENST00000563688	LINC00032	P0C843	101 aa		-0.08	□□□□□ -2.42
SCAPER-208	ENST00000563688	MT1HL1	P0DM35	61 aa		-0.08	□□□□□ -2.42
SCAPER-208	ENST00000563688	SPRR1B	P22528	89 aa		-0.08	□□□□□ -2.42
SCAPER-208	ENST00000563688	S100A1	P23297	94 aa		-0.08	□□□□□ -2.42
SCAPER-208	ENST00000563688	UBE2L3	P68036	154 aa	Known RBP	-0.08	□□□□□ -2.42
SCAPER-208	ENST00000563688	HAMP	P81172	84 aa		-0.08	□□□□□ -2.42
SCAPER-208	ENST00000563688	KRTAP19-8	Q3LI54	63 aa		-0.08	□□□□□ -2.42
SCAPER-208	ENST00000563688	NCMAP	Q5T1S8	102 aa		-0.08	□□□□□ -2.42
SCAPER-208	ENST00000563688	BVES-AS1	Q5T3Y7	98 aa		-0.08	□□□□□ -2.42
SCAPER-208	ENST00000563688		Q6JHZ5	121 aa		-0.08	□□□□□ -2.42
SCAPER-208	ENST00000563688	MRPL54	Q6P161	138 aa	Known RBP	-0.08	□□□□□ -2.42
SCAPER-208	ENST00000563688	COMMD6	Q7Z4G1	85 aa		-0.08	□□□□□ -2.42
SCAPER-208	ENST00000563688	DEFB105A	Q8NG35	78 aa		-0.08	□□□□□ -2.42
SCAPER-208	ENST00000563688	SPRR2F	Q96RM1	72 aa		-0.08	□□□□□ -2.42
SCAPER-208	ENST00000563688	C12orf57	Q99622	126 aa		-0.08	□□□□□ -2.42
SCAPER-208	ENST00000563688	CDC42SE2	Q9NRR3	84 aa		-0.08	□□□□□ -2.42
SCAPER-208	ENST00000563688	IER3IP1	Q9Y5U9	82 aa		-0.08	□□□□□ -2.42
SCAPER-208	ENST00000563688	CUX1	P39880	1505 aa		-0.08	□□□□□ -2.42
SCAPER-208	ENST00000563688	FAM135A	Q9P2D6	1515 aa		-0.08	□□□□□ -2.42
SCAPER-208	ENST00000563688	MYOM1	P52179	1685 aa		-0.08	□□□□□ -2.42

Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms